Array 1 52548-55199 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWHZ01000032.1 Phocaeicola vulgatus strain CL01T12C17 contig0032, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 52548 33 100.0 33 ................................. TGTGGATACAATAATCACATTGACCGCAATCTA 52614 33 97.0 33 ................................A GATTTCTCACTAGCTAACTGTTGCAAAACAGCT 52680 33 97.0 33 ................................A AATTCTGAGCCTCAGTAGACTGATCCAGAGCAG 52746 33 100.0 32 ................................. AGCTCGGTCCAAGGGATTAAAATCACTCATAA 52811 33 97.0 33 ................................A ATATCGACATCGCTAGAACAGTTAACAAACCTA 52877 33 100.0 33 ................................. CCACGGATTGCGTTTTATAGATAAAACTACGAA 52943 33 97.0 33 ................................A GCAAGAGAGGCGAGAGACTGAAACACGCCAGAA 53009 33 97.0 32 ................................C CCTAATGCCATGATTTCTCGTGGCTTAAATCC 53074 33 100.0 32 ................................. TCCTTGCTATTGGCAAATTGCTATTCCCGGTA 53139 33 100.0 32 ................................. ACCGTTGGAAACCTTACCGACAATGTTGTCGG 53204 33 97.0 32 ................................C GCTGTGTGTTAATTAAGCGAAGCCCCTAGTTG 53269 33 97.0 33 ................................A ATTAAAGAAGAAAATGATTTTATCGAAGTTGAA 53335 33 97.0 32 ................................A GGCTGATATGACTCAGATTTTGTTGAATCAAG 53400 33 97.0 32 ................................A AGGCACTGTGCCGTATGACCGGGAACTTAAGA 53465 33 97.0 33 ................................C TAGGAGATGCGTATTGAACGTATGTTGGTGTGT 53531 33 97.0 32 ................................A CAGCCAACGAAATTCGACCAGTTCCGGACCAA 53596 33 100.0 32 ................................. TCCGTAATTGGCATTTGCCTTCCTTCGGTTCT 53661 33 97.0 36 ................................A GAATAATCCAGGACGTACTGTCTCCGGTTCTCTAGG 53730 33 100.0 34 ................................. GGCAATTTTGTTGGTGCATTTCGTCCCGGTGCTA 53797 33 97.0 33 ................................C CTTGCTGAAGCTAAAGCCTCAGAAGCTTCTGCT 53863 33 97.0 32 ................................G TATTAAAGTAGGTCGTAAAGTGATGTTTAGTA 53928 33 100.0 32 ................................. ATCCAAGTTCTGCACAGCATATACCTGGAAAT 53993 33 100.0 32 ................................. ATACCTGTTTTAATGATAAACATAATACGACC 54058 33 97.0 32 ................................A TACTGGATTCCGTGCTGGTCTTGCTTATCAGC 54123 33 100.0 32 ................................. GCTCAGGAAGCGCAGATTTTGCTTGATGCTAA 54188 33 100.0 33 ................................. CCTATCTCTTGTCCATAAACGTACAACTCACAC 54254 33 100.0 32 ................................. ATTGGGCTATGAATCGGGATCTTATGGACTTT 54319 33 97.0 31 ................................A TTCAGTACCCGTAATCGTCGCCAGGTGATTG 54383 33 100.0 32 ................................. ATGATTGCATCTACTAATACTGGTAAGGCTGC 54448 33 97.0 34 ................................C TAAATTAGGTACGTGTTAACATACTTTAGGACTA 54515 33 97.0 31 ................................A ATCAAAGAAAAAACTACTGGTCGTGATGTTA 54579 33 100.0 32 ................................. GCATAGTGATTATGAGGATGTCATAGGCATTT 54644 33 97.0 32 ................................A AAAACCAATAATACCAGGCGATTGCCCTACGT 54709 33 97.0 34 ................................C TTTCGGATGCCTAAAGATACACCTATTAACAAAA 54776 33 97.0 32 ................................C TCATTACCAGACACTTACAACAAAATTTAACA 54841 33 97.0 32 ................................C TATAACGCGCGTATTGTAGAAAATACTCCATG 54906 33 97.0 31 ................................A TCCTTATATGTAAATCGAAGCATTGATAGTA 54970 33 100.0 32 ................................. TCTTCGAGCAGATAGGACACATACCCACGTCT 55035 33 100.0 31 ................................. CCTGTGCCAGACTTTCCAAACTTCTGCCTGT 55099 33 97.0 33 ................................A ATGACGAGGTGAATACGTGTATAGACAACCATA 55165 33 90.9 0 ....................A.........G.A | TA [55184] ========== ====== ====== ====== ================================= ==================================== ================== 41 33 98.0 32 GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : ATTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAATCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGCGTTCCAGAGTAAATATATTATATTTTTTACTATACTATTCCTTGTTGTTTATTTGTTATATTGTTGATTATTAATGTGTTATTGTCTGTTTGTGTCGATTGTTTTTTCTTATCTTTATAAAATATATTAAAACATAAACTAACATGGAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGG # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //