Array 1 151-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIBR01000003.1 Enterobacter hormaechei strain BWH70 scaffold00003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 150 28 100.0 34 ............................ CTGCATGACTGGATATCCATTCCGGTTACTGCAC 88 28 100.0 32 ............................ CCACATATGCATTCATCTCACCGGTGCGCATC 28 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 3 28 100.0 34 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAGCCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGCCCAGAATGTAATATATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGATATGATTTAA # Right flank : A # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3046019-3046346 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIBR01000001.1 Enterobacter hormaechei strain BWH70 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3046019 28 100.0 32 ............................ TTACAGAAGCCACCAAAGGATAAGGGAGATGG 3046079 28 100.0 32 ............................ ACCCGCTACCAAAGCACTCAGCCAAAGACAGA 3046139 28 100.0 32 ............................ AGCGTGTTCTTGAATCCTGCCAGACCATTAAC 3046199 28 100.0 32 ............................ TCTAACTGCCAGACTTCCTGGCTTTCTCCCTC 3046259 28 100.0 32 ............................ TACGGCGACACCGACACGCGCCAGCGTGTTTT 3046319 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGGGCAGGCAGCTTAGAAA # Left flank : CAGGAACCTGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACTTCTTCATGGCGGGTGGGCATCCACTCAATAGTTTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAATCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACAGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTATTCCTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGAGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGGTGCATAAGTTGTTGATTTTATATGGTTAGGCTGAAGGGGAATAAAAAAGGGGTTGGAGGGAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGATGTAGATTGCTTCA # Right flank : ATCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGAGGTTCCAAAGGCAAATGCGCTGGCCTGCATGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3064141-3065010 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIBR01000001.1 Enterobacter hormaechei strain BWH70 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3064141 28 100.0 32 ............................ TGATGCAAGATAACACCGCCACTATGACGATG 3064201 28 100.0 32 ............................ TCCATTATACGCATTGGGCCTAGTACGTCAAA 3064261 28 96.4 32 T........................... CTATACCGCGGGCGGTGATTATTTCCCTTTTC 3064321 28 100.0 32 ............................ GCACTGTTTAATGATCAACGGCCTGTAGCGTT 3064381 28 100.0 33 ............................ CATTGATCGCACAAAGAAACTTCCAGATGGAGC 3064442 28 100.0 32 ............................ TGCGGTAATTGTCGGTACCGGTTCAGTGACTT 3064502 28 100.0 32 ............................ TCGTCAGCATCATCAGGCGCTTCTGAGGGCTT 3064562 28 100.0 33 ............................ TTCGCCAAAGCGCTGGCCGTCCATAACGATGAT 3064623 28 100.0 32 ............................ TTGCGGGGTGGCGGGATTCCGAGCACCCGCAT 3064683 28 100.0 32 ............................ CATGCCGCGGAGTAACTAACGTGATATCCCTT 3064743 28 100.0 32 ............................ CATAGCCTTGCTGATGATTGACTCAGCCCATT 3064803 28 100.0 32 ............................ GATAACGATCCCCCAGACGACTGAAGAGCTCA 3064863 28 100.0 32 ............................ TCTATTTTCCCAGTCAAGGTAAACAGATAACC 3064923 28 100.0 32 ............................ GCAACCGCATTGGCCCTGCTTATCACCATGTT 3064983 28 71.4 0 ......CA....A........A..CTCC | ========== ====== ====== ====== ============================ ================================= ================== 15 28 97.9 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGAGTGATTTCCGGGTGGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGGCAATGAGTGGCTGCTGGAAGATACTGAAATTAAGTGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGTTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAGGTTTAGTGTCGTGCGTCGGGGGAGGGGCTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCCAAACATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAACTCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATGCATTAAATACGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAAAAATGCCGTATTCAGGTAAATGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 3069372-3070063 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIBR01000001.1 Enterobacter hormaechei strain BWH70 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3069372 28 100.0 34 ............................ CTGCATGACTGGATATCCATTCCGGTTACTGCAC 3069434 28 100.0 32 ............................ CCACATATGCATTCATCTCACCGGTGCGCATC 3069494 28 100.0 32 ............................ TCAGGCTGGCAATACATCTTCGGCATTGTCGG 3069554 28 100.0 32 ............................ TTGCAAATCGAAAATGCGGGACTGTTCAATAT 3069614 28 100.0 32 ............................ CGTCGGAACGGCGCATCGCTGCTGCGGCGGCT 3069674 28 100.0 32 ............................ AGACAAATAGTGTCCGTTCACTCTGCGGGTGT 3069734 28 100.0 32 ............................ TAGTCACCCAGCGTTTGATGCATTACGGTGCG 3069794 28 100.0 32 ............................ AAAAAAGCGATTACGCCGTTCTTCTATCAGGA 3069854 28 100.0 32 ............................ GATTATCGTTTCAAGCTGCGTGACGCTTATTT 3069914 28 96.4 32 ........T................... CACTCAATGCCCATTTGCACAAATGAGTTAAT T [3069920] 3069975 28 100.0 32 ............................ TTCCTGCGATTGCTCTATGGCGCGACGAGTGA 3070035 28 85.7 0 ...........A........T...T..C | T [3070055] ========== ====== ====== ====== ============================ ================================== ================== 12 28 98.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAGCCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGCCCAGAATGTAATATATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGATATGATTTAA # Right flank : CATCCAATGCAGCAGTACTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAATCCGAAACCCAACCACTCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //