Array 1 30918-34129 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJELO010000016.1 Acinetobacter baumannii strain MRSN32943 MRSN32943_contig00016, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 30918 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 30978 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 31038 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 31098 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 31158 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 31218 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 31278 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 31338 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 31398 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 31458 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 31518 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 31578 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 31638 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 31698 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 31758 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 31818 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 31878 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 31938 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 31998 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 32058 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 32118 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 32178 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 32238 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 32298 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 32358 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 32418 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 32478 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 32538 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 32598 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 32658 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 32718 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 32778 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 32838 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 32898 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 32958 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 33018 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 33078 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 33139 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 33199 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 33259 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 33319 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 33379 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 33439 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 33499 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 33559 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 33620 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 33680 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 33740 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 33800 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 33860 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 33920 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 33980 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 34040 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 34100 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //