Array 1 1202916-1201786 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_007356.1 Dehalococcoides mccartyi CBDB1, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
   1202915	    29	 100.0	    32	.............................	GTACGTGACTTCTGGGATACTGAAAAACATAT 	
   1202854	    29	  96.6	    33	............................A	TTTACAGAGATTAACAGGCATTACAGGGTTGCC	
   1202792	    29	 100.0	    32	.............................	TTCAGTAGTTATGCTAATTCAGAAATAGACAG 	
   1202731	    29	 100.0	    32	.............................	ATTGGTATAAAGAGGCGACTCAATGTTTCGGT 	
   1202670	    29	 100.0	    32	.............................	TGGGTATCTCCAAGCGGATACAGCTTGAATAC 	
   1202609	    29	 100.0	    32	.............................	CTACCAGGGCTAAAAGAGAATACATAGCAGAA 	
   1202548	    29	 100.0	    32	.............................	TTTGAAGGCTGGAACAGGAGTTATATGCCCTT 	
   1202487	    29	 100.0	    32	.............................	TATCCATGCCAGCGGGCCTGACCTGCCCCAGA 	
   1202426	    29	 100.0	    32	.............................	GTAACTCCATGTAGTAGTCCAAGTCCTTTGAT 	
   1202365	    29	 100.0	    33	.............................	TATATATACCCCCTTACCCCCTAATGGGTTTGC	
   1202303	    29	 100.0	    33	.............................	AAGCCGCAGGCACTTAAAAGGAGCCAGCTTCCC	
   1202241	    29	 100.0	    32	.............................	GCTACAAAAAGGGTGCACCTCTAACCATTGGT 	
   1202180	    29	 100.0	    32	.............................	TTAGCATGGTTATCAAAGCCGGTTACCAAGTT 	
   1202119	    29	 100.0	    32	.............................	TTGTCTACACTAGGTATTCTAGTCATAATTTG 	
   1202058	    29	 100.0	    32	.............................	GGAAAATTATGAGCATGAAAGGGTTGATATGT 	
   1201997	    29	 100.0	    32	.............................	ATGCAGTTGGCACAGCAGTCAAACAAGCTGGA 	
   1201936	    29	 100.0	    32	.............................	TAATGTGCCTGATATTTGAGGGCACTTGGATT 	
   1201875	    29	 100.0	    32	.............................	CAAGAGTGGGTGCTATAGCTGATGGAGAAATG 	
   1201814	    29	 100.0	     0	.............................	|                                	
==========	======	======	======	=============================	=================================	==================
        19	    29	  99.8	    32	GTATTCCCCACGCATGTGGGGGTGAACCG	                                 	       

# Left flank :   CTATTCCAGTGGCGTTCAAGGTTGCAGCGGCCAATCCAACCGACCTTGAACGCCAGGTAAGAATTGAATGCCGGGAGGCCTTTTATGAATTCAAACTCCTTGAAAGGCTATTGACGGATATTGCGGAGGTACTTGGTGTTAGTGATGATATTGGAGAAAGTCCCGACGAGTTTGAGGGGCGCATTGTCACGTTGGCTATTGGAACCGAAGACGGGAGTTTTTCTTGGGAACCCGAGCGCTCGGGTGAGGGATGAACTCTGGGAACGGGCGATAAATAAGACGAAAGAAAGCGGTGCTATCCTCCAGATTTGGACAGACCAGAACTCCCAAGGATTTTCTTCCCGCCAATATGGTGAGAGGGAGCGGACTTTTGTTGATTTTGAAGGGTTATATCTGGTAAAAATAGACAAGAATACCAGCACTATCAAAACGCAAAATTCTGACACTACAAACCCCTAATCAGGAATGACCTGTTTTAAGGTCAGCTTTGTTATTTTAGG
# Right flank :  CTTTAGCTTTCGGATGAAAATGCCCGTGTAGCCTTGCTCGTAGGGTAGGCACTTAAAAAAAGAAGTGCTACGTTCATATATCTTGCCCTACCCTACCGTCCCCGTTCGTCTTCGTTCCTGTATCTCCCTTTTCTACTCCAGCCTAAAAATAGAAAAAGAAATTGAGATATTGCCTTATGGGCGGGTTTCCGCTCAGGTTTGTTTCTTACTTGCCTTTGTATCCCCGGATGATGTTCTCTATCAGTTTTTTTAAGGCTAAAACGATGGAAAGTAGAACGGCTATTGCGAGTATGCTACCAAAAAATCCCCCTATTCCTGCTGGTGACATATGGTTCTCTCCTCAAATTAGAAATAAATTGCCTAAAGAATAACCTTTCGGTTAGGTAAAAGCAATAAATGACAACAAATATATACAAGGTGGTGGATAAAATGGACAACAAAGATATAGCCCGTCTCTTTTCGTGGGTTTTGATGCAAGGTGGAACGCTTAAAGCGGTAAA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCACGCATGTGGGGGTGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.80,-11.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,4.87   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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