Array 1 7064-6260 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYJP01000030.1 Vibrio mexicanus strain CAIM 1540 contig00039, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 7063 35 100.0 38 ................................... CAATAACCATAGTAGAGTCTGCCCACCAGTGCCATCCT 6990 35 100.0 37 ................................... TATCATCAGACATCTTTGGCATAAGTGAAAGTGCCCA 6918 35 100.0 37 ................................... CAGAGTTTAAAACCGCATGAAAACCAGTGATAGTAGT 6846 35 100.0 35 ................................... GGTTTTCTTTTCGTCATCCATAAAGTTCATCCAGT 6776 35 100.0 33 ................................... ATCTCTGGTTGTGTACATGTAAAGTTTTTCATA 6708 35 100.0 35 ................................... GACATTTTTGGCATTAACATTTTTGCCCAAGCGAT 6638 35 100.0 34 ................................... CGAGCAACTTCACCAGATGGCTCGATGATGATAT 6569 35 100.0 32 ................................... AAGCTTCCTTTTTCTGCTATCTCTTTAGGAAG 6502 35 100.0 34 ................................... TCATAACAGATACATAAGTATCTTCTAGACGCTC 6433 35 100.0 34 ................................... TTCTCAGCGGTTTTCTTCTCGTCGTCTATGAACT 6364 35 100.0 34 ................................... AAGGTCTGCATGAGATAGATACTCATCTAGTCTC 6295 35 94.3 0 ................................A.A | G [6265] ========== ====== ====== ====== =================================== ====================================== ================== 12 35 99.5 35 GTTTAAGCACTGCCCGGTTATGACGGGATTAAGAC # Left flank : TCTTTCTATATAAGAAATTTAACTTACCTTGTTTTTCTTGCGCTTGAGAACAAGGCAAATTTGTTTCGCAAAAATTACCCTAAGCAAGGAGTTGATAAGAATGTAGTTTTAATCAATATTTTATTGATATAGGTCTTCGCATGAGTGTATTTTTTAGAGGTGCTCGATGTATTTTTGTAATTGATAGTTTTGTATTCTCAAATGCAAATAGCATATTATTGTCAGTGAAAAGAGGATTGACGAGCAGTTGAGTATTTAGGTTTCCCCAAATATTGTAGGAATATGTCGCTAAGAATTAGTGAGATTCACTGCTTTATTTATTCACTTTGGGGTCAAATCCAAGCACGCCTTTTAAATCAACTGATTAGGGTGGTTTCGAGATGGAAAATAATCACAAATCTGACTATAAAGTTACCAGTGGTGCATATTTATGTTTGTTGTATTTTTTTGACGCACAGCACGCTCACACCCCTTGCGAGACAGGGGCTGTGAGAGGTACA # Right flank : TAGCAGGCTTTATGGCCTGCTATTTTTGTATTGATGGGTTGGTTACTTTAGAGGTTAGTCGTTAAGCACTGAAATGAAGCGGTTTAAAGCGGGGTTGAATTGAGCGGTGTTAAATTGCGGTGGCTCGCCTTTCGATGGCTCATATTGAAAAGGGATGCCAATTTTATACTGGGCAATCGACGCGGTTTTATAAGGGTAGAGCTTAAAATCGATGCTCGTATCACCTAGCATTATGGTGCCTGATTTTTCCGATTCGGCCTTGTCGTTACTTGATAGGCTCCGCTGATAATTATCTTTGTAGCGGCGCTGGATATTGGCAAAAGCGGTAATGTCATCATTTTTCAGCTTGGTTTCGCTTCGTGGTAATAGGTTTTGGTAAAGCTTACTGTAAGTGCGGCGTTTATTCGGGTGATGAGATCGGTATAAGCTTGGTCTTGTGAAATTAACTGTGCGGTGATTACATCGTGCTTTCTACCAATGTAATGTGCGGTGGGCGCAAC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGCACTGCCCGGTTATGACGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.50,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 24424-25156 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYJP01000030.1 Vibrio mexicanus strain CAIM 1540 contig00039, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 24424 35 100.0 35 ................................... TAGCTGCTTCCTTAAGGAGGCGGCGTTCTTCTGCC 24494 35 100.0 36 ................................... AAAAGTCGAAGTTAGAAAGAATAAATTTAATTTCTG 24565 35 100.0 33 ................................... GCTTGTAGAGTATTGAACTCAAAAGCGTACCCC 24633 35 100.0 35 ................................... AGCTTTTCTAAGCCCCACTGCAAAAGCATAAACGG 24703 35 100.0 34 ................................... TACCCCACATGGTACGGGTTAGCGGTTGGTAGCT 24772 35 100.0 34 ................................... CCGGTTTGGCGTGCTTTCATAGCAGTAGAGTAAT 24841 35 100.0 35 ................................... AAACCGCGTAGCTGTACATTATGAACGCGGCATAT 24911 35 100.0 34 ................................... TAGTAGCAATATTGATGTCTTCAACTTGTACAGT 24980 35 100.0 37 ................................... ATGATTGAAGAGTAATCTTCATTGATAAACGGATAGT 25052 35 100.0 35 ................................... CTTAAATTTTACATCAACAAGTGCTGCCTCTATTT 25122 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ===================================== ================== 11 35 100.0 35 GTATGAGCACTGCCCGGTTATGACGGGATTAAGAC # Left flank : AGCGATAACAAAAAGCGCCGCCGAGCGGTAAAAGTACTCGAAGGCTATGGGCATAGAACTCAGTTCAGCGTGTTCGAGTGTTTGGTTCGCAGACAGCAGCTACGCCAAATTCAAACAAAGCTAAAAAAACTGATTGAGCCGAGTGATAAGGTACTATATTACCCAGTGTGCGGGAAAGATGCATTGTGCCGATATGCCGATGGCAATGGAGAAGTATATTGGCCAGAAGTGCTGCACATCGTTGATGGCTAACGATCACAAAGGCTCCATAGAAAGCATTACGTTTCAACGAGAATTTGGCGTTTTAATCTAGGTATTTCTCGAATAAAGCGCCAAATCCAAGCACATTATATAAATCAGTAACTTGGAGAAGCATTATGTATATTCATAACGCCAAAAATGGCAATATATGCATAAATAGTGAATATGTAATTTTACGCGAAATTTTTGACGCACAGCACGCTCCTAGCCCTTGCGCCATAAGGGCTACAAAAGGTACA # Right flank : CAGCTCACCGTGCCCGCCAGGCACACACCACAACATATGAGCACTGCCAGCCATGCAAATGGATGAATACAATACGTGTGGCTTTAAAAACCAAACTGAGCTATGTTGAGCGATGACGTCGCACATTCAAACTTGGGAAATAGACGAATGAAATGGTTTGTGTCTCGCCATACGGGTGCCAAAGAATGGGCCAAGCTCAATAAACTCGACATTGATGTTTTCGTCGACCACTTAGAGCTTAATGCCATCAATAAAGGGGATACCATTATTGGTACACTCCCCATCCATCTTGCTGAACAAGTTTGCTCGCTTGGTGCACGCTATTTGCACTTATCACTTAACCTGCCCCTCAACAAGCGTGGCACTGAGCTAACCGCGCAAGACATGATAGATTGCCGCGCTCAGCTTACCGAATATCAAGTCGTAAGAATCGATGCTTAACCCCTACAGCTTTCACAGTGTACAGTCAACAAATTAACTTCCCTGAATCAAGTACAATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATGAGCACTGCCCGGTTATGACGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //