Array 1 1039073-1042532 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQYZ010000001.1 Psychroflexus lacisalsi strain KACC 14089 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1039073 46 100.0 30 .............................................. TAAAAAAGCATTTGTAGCATTATACGCTCT 1039149 46 100.0 30 .............................................. CTATATCAGTAACGGTGCTATTGGTTTCGC 1039225 46 100.0 30 .............................................. ATTTAGCTGCTTATATATTCGTTAACTTTA 1039301 46 100.0 30 .............................................. ATTTACAGAGGCCATATAAACGAAATGGCA 1039377 46 100.0 30 .............................................. GCGACTAAGTAATAACATTTATCAACTTCC 1039453 46 100.0 30 .............................................. TAAAAAAGATTTGGTTAAATATTATAATCA 1039529 46 100.0 30 .............................................. TTAAAACACAAATTGGAGAATCACTTACAG 1039605 46 100.0 30 .............................................. TTAAAACACAAATTGGAGAATCACTTACAG 1039681 46 100.0 29 .............................................. CATTTGTCAATTTTAAACTCAGCAATACA 1039756 46 100.0 30 .............................................. ATTCATTAAAATGTTTTTCTGTAAGGTCTT 1039832 46 100.0 29 .............................................. GTTGAACAGGAATTAACAGAATAGATATG 1039907 46 100.0 30 .............................................. ACTTTTTTAAACTTGTAAATATTGGAGGTG 1039983 46 100.0 30 .............................................. AAAAGTGATGGATGGCTCCTTGATCGCTAT 1040059 46 100.0 30 .............................................. GACGAAGAAGGAAACCCTACAGGAGAATAC 1040135 46 100.0 30 .............................................. ATTGGCTGAGTTTGAAAAACAGTCAACTGC 1040211 46 100.0 30 .............................................. TTCTACCCTACTCGATCTCAAATGGATCAA 1040287 46 100.0 30 .............................................. TATTTTTATAAACTACTCTAGGTATAAAGA 1040363 46 100.0 30 .............................................. TTCTAGTTTTCGACGATGTTAAAAAGAATT 1040439 46 100.0 30 .............................................. AAATCGTAAGTAATGAAAAACACATATCGA 1040515 46 100.0 30 .............................................. CCTGTCTCAACAAGTGTAAGTGTTGAATCC 1040591 46 100.0 30 .............................................. CCTGGTACTTTGAGGGATTCTGTGGCCATT 1040667 46 100.0 30 .............................................. AGTGTATTGTTGGCCACAGGATTGAAGGAA 1040743 46 100.0 30 .............................................. CTGAGGTGCCGATGGGAATGCGGGCGGTAC 1040819 46 100.0 30 .............................................. ATGCTGACATTGCAGAAGAGAGACAAATTG 1040895 46 100.0 30 .............................................. TGAAAAGATGCAACGCTTTAGAAGGAGGGT 1040971 46 100.0 30 .............................................. CATCTGCTCTAAGTTGATCGCCTATTCCAG 1041047 46 100.0 29 .............................................. TGGAGTTTGACGTTGTTTGGCTCAATTCG 1041122 46 100.0 29 .............................................. CCCCTACAAGTGCTAGCCTAGCATCTTGA 1041197 46 100.0 30 .............................................. GTTGAATTAATTGCATACACAAATATAACA 1041273 46 100.0 29 .............................................. CAGCAGAACAGCATTGTTTCTTTGGAATA 1041348 46 100.0 30 .............................................. ATTATCTGGCCAACAAAAAAATAGATTTCT 1041424 46 100.0 30 .............................................. AAATCCTTAGTACAAGTTGGAGCTAACAGC 1041500 46 100.0 30 .............................................. CTGCCTTTATTGAGCTATTTACAGCAGATG 1041576 46 100.0 30 .............................................. GTAGTGCCAAGTATCAATCTATAAAACTTG 1041652 46 100.0 30 .............................................. TTGTGGCTTTGCTATATACATCACTTGTGG 1041728 46 100.0 30 .............................................. ATCACAGCTTTCAAAGATATAAGAGAAACA 1041804 46 100.0 30 .............................................. AATGGTTGCTCAAGTAGCAAGTAATATTTA 1041880 46 100.0 30 .............................................. TTTGAAGACTTGCAAGCTTTCGCGAGCGAA 1041956 46 100.0 30 .............................................. GAAATGTACAAAAGAGGAAAAACCTTATTT 1042032 46 100.0 30 .............................................. TCCCTCTATAAGAGAAGCTGTGGTGGGATA 1042108 46 100.0 30 .............................................. GTTTTGCTTGGTCTTTACTTGCTCCAGATG 1042184 46 100.0 30 .............................................. CAATTTGACCTTGGGGATAGTGTTTACTTA 1042260 46 100.0 30 .............................................. AAAACAGATCCTCCAAAGCAAACCACAGAG 1042336 46 100.0 30 .............................................. AAAGCTTCAAAAGCTTATAAATCTCATCGA 1042412 46 100.0 29 .............................................. CGATCAAGATAATTTCCCATTGAACAAAA 1042487 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 46 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTCATTAATGATTCACAGG # Left flank : CATTATAGTAATGCTAGGAGCTGCAGTAATAATTTTATTATAAAATTAAGAGAAATGCAAACAGATTATTTGGAAATAAAAGAAGCCGAGACGGAACTGGTGCAAAAAGTAGCGGCACTGATAAGAATAAGGCGAGAAGAACTAGGCATGGGTCAAGTTCTGTTATCAAAATTAAGCGGAGTAGAAAGAGCTAATATAAGCAGGATTGAAAGAGGTAAGCGTCCAGGGCTCACCTTTGGAATTGTGGTAAAATTATTCACTGCTTTAAAAATTGACTTCGCCGCTATTGACGATTTATAAATCAAAAAAACTATCAAAAAAAGCCCTCCGATTATTCGGCAGGACCTTTTTTTATGTCTAATAATTTCTTAAGCATATTTTCAATACGGTTTAGCTGTTAAGGAATAATTGAAACCTTATTTAAATCGATCAATGCTGGAGGACTTTGTATTTTCATTAATGATTCACAGGAAGCTTCTGCACTTGTTATAGTTGAAGGA # Right flank : GGTATCAGCTGTAAAATGCTGATACCTTGTTTTTTAAGCAATAAATAGCTTAAAAAAAATGAAAGAAATGGATAGGGTCTAAAGGAAAATATAGGTTTAAAATAATTCTAACTGTTGAGAGGGTGGTTCCATATAGGCTTCTTTTTTTCCATGAAACAACTCAATCATCCCAAACTGTTTATCGGTGATTTGCATGATACCAACCTTTCCTTTCTTTGGCAGTGACTTTTGAATTCTGTTAATATGTACTTGCATGTTTTCTCGACTGGCACAAAATCGCGTATAAATTGAGAATTGAAACATACCAAATCCATCGTCCAACAAGGATTTTCTGAACCGATTGGCTGCTCTTCGATCTACTTTGGTTTCTGTCGGTAAATCAAAAAATACCATTACCCACATAACTCTATATTGATTTAATCTCGATAGTTTGTTTTCCACGTTCCATCATTATTTGGTTATGAATTAAATTCAGGATATAATAGGCGTCTTGAACTTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTCATTAATGATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTTAGTGATAATTCACAGG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 494689-495470 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQYZ010000002.1 Psychroflexus lacisalsi strain KACC 14089 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =========================================== ================== 494689 32 78.1 43 ......A....GGA..CT..A........... TGATGACGCATCATTAAACATAAACTCCATATTAGAAACATTA 494764 32 90.6 43 ..............GAC............... TGAAGTTGCATCTTTAAACATAGCAATCATATTAGTTACTTGA 494839 32 87.5 43 ...........G....C...A......C.... AGATGATGCAGAAGAAAACATAAATCTCATATTAGTGACTTGA 494914 32 96.9 43 ............................C... TGACTCTGCACCATAAAACATGAACCCTATAGTTGTAACATTA 494989 32 100.0 43 ................................ GGAAGTTGCATCATTAAACATAAACTCCATATTAGAAACATTA 495064 32 87.5 43 .......T......GAC............... AGATGATGCCTCAGAAAACATAAAGTTCATATCAGTTACATTA 495139 32 93.8 43 ................C.....T......... AGATGACGCATCATTAAACACACCAGCCATACCATTTACTTGG 495214 32 90.6 43 ............GA..............C... AGATGATGCACGATAAAACATACTACGCATATTGGTAACACTA 495289 32 90.6 43 ................CC..A........... AGATGAAGCGTCTTTAAACATATTCCTCATGTTTGTAACTTGG 495364 32 78.1 43 ............GA...T.A.TC.....C... AGATGTTGCTAATGAAAACATTTGAAACATGTTTGTAACTTGA 495439 32 81.2 0 ............C....T.AATC......... | ========== ====== ====== ====== ================================ =========================================== ================== 11 32 88.6 43 CTTACATCCCAATTATTAAGGGGTTGGTTAAA # Left flank : CTATCCACCCAGCAAAAAGCCTCTACAGTTTTGTAGAGGCTTTGATAACTATAATATTTTCAATACAAAGTGTTTAGTTCACAATTAATCGCTTTACAAATTGTTGGTTATCTACTGTTGTAAACTGAACAAAATAATTACCGGCATCTACACCTGAAACGTCAAGGCCATTGTTTATTTGACTTGCTGCGAGGGTTTTTATATCTCGACCCAGTATATCAATCAACTTAATTTTAGAAAGTATCACCTGCCCATCATTTTCGATAAACACTTTTGAATTTGAGGGGTTAGGATATATTAGAATATTAAATCCAATAGCTTCTGGGTTTGTTGTGGATAAGTTACACTCTGCACCCCAATTTGGAAAAAAGTCGTTTTGTAAAGCAGAGTTAAGAGCGAAATCTTGGGGTTCATTTGGGATCTGCTCTACACACCACATTGAAATATCTTGGTTAAATACCAGAGCGTCATCAAACATTTTACCCATATTAGTTACCTTG # Right flank : AAAGAGATTGAAGGACAAACATACTAGACATATCGTCAATACCACTTGTACAGGTTAAGGCAATATAGGGATCTTGTTCATCATTATCAATTAATGCATTAAGTTGTGCACGACTCCTTTTTGTAAAGGTTTTGGTTTCACCGTTAATGGTTAAGGTTCCTGTGTCTCCAAAATCAGCTCCTGGACATAGACAAGTTACCCCATTGGGGGCTAGATAAAAATCTGGGTTGTTTTGGGCGTAAAGTGTAAGTGTAAAAAGAAATGTGGTTATAAGTAATAGTTTTTTCATAATAAAGGGTTTTACTTTGTATTTGGATTCAAGTCATAAATGCATCTTTAGCATTAAATAATAATTGAACCATTACAAATATAGGATTTTCATAATTAAACCTTTTTCTAGGTCTTAGATTTAATTTTTTTTATCTGGCAATCAGTGATTTTTGTAAAGTCTGTTTTGAAAAAGTATCTATTCATTTTAATAATGAGCTTCACAATAGCGA # Questionable array : NO Score: 3.39 # Score Detail : 1:0, 2:3, 3:0, 4:0.43, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTACATCCCAATTATTAAGGGGTTGGTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [15-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //