Array 1 4200-6187 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPSE01000092.1 Streptomyces sp. WAC05292 AA000323-92_WAC05292, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 4200 29 100.0 32 ............................. CCGGCCCCGTCACGCCCGACCCGGAGGAAGGC 4261 29 100.0 32 ............................. CAGGTGGCGTCGGTTTCGTCGATGCCGGTGAA 4322 29 100.0 32 ............................. TCCCCTCGCCAGCCGCCAGGGATGGCGGTGGG 4383 29 100.0 32 ............................. TTGTGGACGCTGGACAGCGACTTCGGCAAGTG 4444 29 100.0 32 ............................. TCCGTCTGCAATGTGGTGGTTTCGGAGTAATC 4505 29 100.0 32 ............................. CCCATGCTGGCGGGCGGATGGATGGTGCAGTT 4566 29 100.0 32 ............................. AGGTCGGCGACGCCGGCGAACTGGGCCCCGGT 4627 29 100.0 41 ............................. CCGGCGCTGCTCCAGAGTGCGGATCACGTCTCCGCCCGGAG 4697 29 100.0 32 ............................. CAGGGCGGTCGACGCGACGGGGCGCGGCATCA 4758 29 100.0 39 ............................. GCCACCGGGTCAGACGGCTTCGACTCGCCATCGACGAGG 4826 29 100.0 32 ............................. CTATCTCGGATGGGCACCGCCCTATTTCCCCA 4887 29 100.0 32 ............................. CGGTACCCGCCGTACTTGTTGATGACGTACAG 4948 29 100.0 32 ............................. CAGAGTCTGTTCCACGGGCGGCCGCTGGACTG 5009 29 100.0 32 ............................. TGGAGCGCCATCGGAATGGCGGCGCCGATGAT 5070 29 100.0 32 ............................. CCAGACGTCGGGCGGGGAATTCGCGGAAGTCG 5131 29 89.7 31 .....................G...T..G GAGGCGATCGGCCCCCGGATCACCCCGGAGG 5191 28 96.6 32 ....................-........ TCCTGTTCGGCATCCGCAGCACGGAGTCCGGC 5251 29 100.0 32 ............................. CGCATCGTGCTGGACGAATCCGGGGCCGCCCT 5312 29 100.0 32 ............................. ACCATCCGGCTGCCCCTCGTCAACCAGAACAC 5373 29 100.0 32 ............................. ATGTGGCGCCGCGCCTACCAGCCCACCCTGGC 5434 29 100.0 32 ............................. GACCGGGCGGGGACGTTCGAGCTCACGGCCGT 5495 29 100.0 32 ............................. ACCGCCGGCGCCTGCACCGCATGCGGATCGCT 5556 29 100.0 32 ............................. TCCGAGGTGGCCGATACGGACGTCCGCGGCGA 5617 29 100.0 31 ............................. ACGACAAAGCCCCCGCGGGGGGCCGACGGAG 5677 29 100.0 32 ............................. TCACCAGGCAGGAAATGCACGCACTCCGGAAG 5738 29 100.0 32 ............................. TGGACGGCGCGGTCAAGGAGATCGAGTCGCCG 5799 29 96.6 32 ........T.................... CCCTACCTCGCCGCCACGGCGTACGGGCAGGG 5860 29 100.0 32 ............................. TGGTGGGAGAACGCCCCCGGCGGGCAGGCAGG 5921 29 100.0 32 ............................. GAGTCGATGACGACGGCCTGGTGGCCGTTTTC 5982 29 100.0 32 ............................. GAGGTCGGGGCGTTCCTGCTCCTGTGCAGCAG 6043 29 96.6 31 ........................C.... CTTCCCAACCATCGGTCCGTGCCCGGACCGA 6103 29 96.6 23 ...............A............. ACCTCAGACCTGCCAGCCGGCGC CGA [6113] Deletion [6158] 6158 29 79.3 0 .......T....T..TG.......G...A | A [6173] ========== ====== ====== ====== ============================= ========================================= ================== 33 29 98.6 32 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : GCCGAGCACGCCGAACTCGCCCGCATGTCGGGGGAGCGGCAGGCCGCGGAGCTGCTGCGGCTGTGGACGCTGAAGGAGGCGTACACCAAGGCCCTCGGGCAGGGCCTCCAGCTCGGCTTCACCGAGTTCGGCTTCGGCCTGCGCAGCGGCGGCCTGATCACCCCGGACGGCACCCCGGCCGCGGGCGGCGAGTGGGCGTTCGCGACGCACCCGGTCCTGGCCGACCGCTACCTGCTGAGCACGGCCTGCCACGACACGGGCCTGGACACGGCCCGCGACACGGCGGTGGACACGATGCTGGACCCGGCGTTCATGGCGGCGGTGGAGGACGCCCTGACGACGGGGTGACCCGCCTTCCAGGCAAACCTGGCTTCGGCTCCCCACTCTATGGGCGGTTCACATAGAAAACACCATTTCTGAACTATTCGAGCGTATTGCCGGATCCTGTGAAAGTGCTCAGAACCGCGCACCTTCTCGCATAACATCGCAGCTCGCATAGC # Right flank : ACCCCTCTTCGCGCCGCGGAGCTTGTCGCCGATCTGTCCCCGTGTCCGCGGTTAGGGCCCGCGGACATGCTGTGCAGGCTGTTGGGCGCGCCTGCCGTTTGCGCGTTGCAGCGCATCGAGCCGGGGCCGGACCTCTCTTCGTCAACAGCAGGCCTCGTTCACTCATATGGGTGATGTCTGGGAAGTGGCGTTCGGAGCGTGTCTGGAGCCCGGATCATGAACGCGCTCCCCTTTCCGCCCAGTGCGGCGAGCCCGGGAGCCCGCTCTCCGGGCGGGGATGGGGATTCCCGCCCGGGTGCGCGTACCAAGGTCCTGGGGGGATCGAGATGCACGACGACGCACCGCACTGGAGTGCTTCGCTGTCACCGGCGGCGCGCACCGTGTGGGCCAAGCACGAGGACAAGACCTCGAAGTGGCTGCCGTTGTGGCGGCACATGGCGGACTCCGCCGCGATGGCGGAGCGGTTGTGGGACGAGTGGCTGCCGCACCACGTTCGGCGC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 15922-16628 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPSE01000092.1 Streptomyces sp. WAC05292 AA000323-92_WAC05292, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 15922 29 100.0 32 ............................. CCGGAATGTTGAGAATCCGATTCGCTATTCAG 15983 29 100.0 32 ............................. CCTTCGGCCCGACCCGGTGCGGGAACGCCTCG 16044 29 100.0 32 ............................. CAGTCCCTGTTCCATGGGCGGCCGCTGGACTG 16105 29 100.0 32 ............................. CGCGACGCCGACCCCGAGCCCCCGAACGTCGA 16166 29 100.0 40 ............................. CAGCTCCACGCCTACGACAAGGCCCTCAGGGGCTGAAGGG 16235 29 100.0 32 ............................. GTCGAGCCCGTCCTGATGAAGCACGGGACCGG 16296 29 100.0 32 ............................. GGCGCGGCCCCGGCCCCCACACCACCAGCACC 16357 29 100.0 32 ............................. CACGGCATCTGCTGGCGGGTGATCCGGGCGTC 16418 29 100.0 32 ............................. ACGTCCAGGACGGCGCGGGTGATCCGCTGGTA 16479 29 93.1 32 ........T...T................ GCCGCGACCACTCCTGACCAGACACTCATCCG 16540 29 100.0 32 ............................. GCGAAGTGCACGCGGGCGATCGGCCGACCGGC 16601 28 75.9 0 ............T....C...-..T.GTG | ========== ====== ====== ====== ============================= ======================================== ================== 12 29 97.4 33 CTGCTCCCCGCACGCGCGGGGATGACCCC # Left flank : TCATGCTCCAGTCGGACCGCGACCTCATGGTCGCCTCCGGGCGGAATCACGCCGAAGAGGTGACCTGGTGACCGTGATCGTGCTGACCCAATGCCCGGTCGGACTACGCGGCTTCCTGACGCGGTGGCTGCTGGAAATCTCCCCGGGCGTCTTCATCGGAGGGCCCTCCGCCCGGATCAGGGCGGCGCTGTGGGCGGAGGTGAAGCAGTATGCGGGCATCGGCCGAGCCCTGCTCGCGTACAACACGGACAACGAACAGGGCTTCGCTTTCGAGACGCACGACCACAAGTGGCACCCGATTGACCTTGAGGGCCTGACCCTGATCCACCGCCCGAGCGCCCGCACCACACGGCAACCCCAGTCGCAGTCCGGCTGGAGCAAAGCATCGAAACGCCGCCGCTTCGGCGGCGGCCGATAGGGCGGCAATGCCTCGAATGCCGCAATCCTTGGAAGTGAGTGAAAGAAGCCGTGACCCTCCGAAAACCCGCAGCTCAGGTAGC # Right flank : GCGCGAGCCGTACGACTTTCCGAGTGCGCTGGTGCACGAGGCCGACATCGCGGCAGTGGCTGCGGTCGCGTTGATGGAGGACGGGCACGTGGGGAAGGCGTACAACCTGACGGGCCCGCAGGCGCTGACCGCGAGTGAGCGGATTGCGGTGCTGTCGAAGATCATCGGGCTGGATGTCGAGCTCGTTCGGATCACGCACGAGCAGGCGGTCGAGCGGTTGATGGCGACGGGTGTGTCCCGGGCGGACGCGGAGTACGTGGTGGGGTGGTACGCCAAGCCGACCGAGGATTCCACGACGGTCGTCGACACGGTCCAGCGGGTGGCGCACCGGCCGGCCCGTACTTTCGCGGAGTGGGCCGACGAGCATGCGGAACGCTTCCGGCTGCCGGTCTGATCTGTAGGGGGCTGCCCGCGGGACGGGCCCGCGGGCGTCGCCCGTCGGCTCTGGCCGTCGAAGGGCCGGCCGCGGCGTCGGTTATGCGGTGCGGGTGAAGCGGGTC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //