Array 1 931130-932681 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033338.1 Salmonella enterica subsp. enterica serovar Anatum strain CFSAN076215 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 931130 29 100.0 32 ............................. AACTGAAACCAGGCCAGGTGATATTTATCAAA 931191 29 100.0 32 ............................. CCGAGTGTGAGCAGGCTATTTATGATGAGCGC 931252 29 100.0 32 ............................. GGCTCCGAATGTGAAGAATCCGACGCTATTGA 931313 29 100.0 32 ............................. GCCAGCGCGCCTGCGGCAGCACCGGCAGCAAT 931374 29 100.0 32 ............................. CGCATTATTAATGGCGTTGATGTTCTGGCGGG 931435 29 100.0 31 ............................. GTAATCAATCTCATATAGAGCGGGGGGGGAT 931495 29 100.0 32 ............................. TAATACCCGATCGAGCGCACTGTGTCGCCGGA 931556 29 100.0 32 ............................. CGCGAGCAATCCCATCTGACGTTCCGGAGACA 931617 29 100.0 32 ............................. GTCATCGTTATACACGTGACGGTTTTAATAGT 931678 29 100.0 32 ............................. AAAATGAACAGCCACACATCCGCCAATAAAAA 931739 29 100.0 32 ............................. GCTGTCGGTCGCAGTGTGGATATTGCGATCAA 931800 29 100.0 32 ............................. GGGCTGAACGGCGATCTGATTACGTGGAGTAA 931861 29 100.0 32 ............................. TACGCCAGCTATAAGGGGTACACGAACAGCTT 931922 29 100.0 32 ............................. GCCCGAGAAAAGTTGCTTCTCTTTGCTGCTGC 931983 29 100.0 32 ............................. CATACCCTGTAGTTTCAATTTCCGCAGGTGGG 932044 29 100.0 32 ............................. AGCGCGGAATGATTTTTAACGCTGAGATGGTG 932105 29 100.0 32 ............................. TACCGCGACACCGTCAACGACAGCAACCACTT 932166 29 100.0 32 ............................. CAGGTCACTAAAATTTGTAGGGTTATCCACAG 932227 29 100.0 32 ............................. GCGCAATTGCAGTTTGACGCGGTGCTGTCATT 932288 29 100.0 32 ............................. TGTCTTAACTCCATTGCTGAGTCGATTGTGAA 932349 29 100.0 32 ............................. CACACAGAACGCCAGTTATAATCATCGGTGCT 932410 29 100.0 32 ............................. TCGTTTGTGGCGTCAGTAATACTATTATCGGT 932471 29 96.6 32 .............T............... TTTTTAAATCCGGACAGACCCTGTAACGGATC 932532 29 100.0 32 ............................. ATCCGACTGTATGCCCAGCAGAACGAGGGCGC 932593 29 96.6 32 .............T............... CACGAGTGGCAAATTGATTTCGACGAAAAACC 932654 28 82.8 0 ...............A.AA....-.G... | ========== ====== ====== ====== ============================= ================================ ================== 26 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GAAATCAAGCATCCCGTTGGGCGAGTTCGTGATATTGAGGCGCTGGATGAACTGTTAGCCACGTTGAGCGATGATAAACCGCGCGTGATTGCTTTGCAGCCCATTAGCCAGAAAGAAGACGCGACGCGTCTGTGTATTGAAACTTGTATTGCACGTAACTGGCGGCTGTCTATGCAAACGCATAAATATTTAAATATCGCCTGATGCATTACTAATCTTACGGACGGCCTGCCGATGCCGTCTGTGACTTATCCATTACCTTGCATTGTTTATTTTCTCTATGTGAATTTCGATGAGTGTATAAAAGCGCGGATAAATTTTTCCATAGCGATGCATGGATCACGCTATTTTGGTAAATTTAAAGAAAAAATCATTCTATGAACTTTTTTGCATCAAAATCAGCAAATTAGCTGTTCTTTAATAATTTAAATTGTTGCGATTATGTTGGTGGAATGTAGTGCTGATAAAAAGTAGTTTATAAACAATGATATCCGTTTAGT # Right flank : GTTGCATAATCATAATCTGTGTACCAGTAATGGCAGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTCCCGGGGAGGCTTTTAGACAGGAGAAGGCCATGGCGTTAAGGATCAGGGTATTGCTCGAAAATCATAAGGGAGCTGGAGCGGATAAATCGTTGAAGGCCCGGCCAGGATTAAGCCTGTTGGTCGAGGATGAGTCTACGTCGATCTTGTTCGATACCGGCCCTGATGGCAGTTTTATGCAAAACGCGTTGGCGATGGGGATCGATCTGTCCGATGTGTCTGCTGTGGTGCTTTCGCATGGTCATTACGATCATTGCGGCGGCGTGCCGTGGCTTCCTGATAACAGTCGAATCATCTGCCATCCCGATATTGCGCGCGAACGTTATGCGGCAATGACTTTTCTCGGTATTACCCGAAAAATAAAAAAATTGTCGTGTGAGGTGGACTATTCACGCTACCGAATGATGTACACGCGTGGACCCCTGCCGATTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //