Array 1 30614-26923 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKSQ01000012.1 Acinetobacter junii strain TUM15407 sequence012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 30613 30 96.7 30 .............................A CTTATCAAAAGATGCACGAGAGTTTTTTTG 30553 30 93.3 30 ............................AC AGCAAGCAATATTCAGAAAGGAAAATGGCA 30493 30 93.3 30 ............................GA CGACATCACAGATACTTCTGTATCTTTCTC 30433 30 93.3 30 ............................AG AGACTTCATTTGTGTATTCAATGACTTCTT 30373 30 96.7 30 ............................G. CTACAAAAATATGTCAATCGTGGTGCTGTT 30313 30 100.0 30 .............................. AAGGCTGCCCCAGTTGATGGCTCTCTATGT 30253 30 96.7 30 .............................A CGGTTGGTGCTGTCTCGAAAGTTCTTGCGC 30193 30 96.7 30 .............................G AGTATTGCGACAACGATGGAAAAATGTCAC 30133 30 96.7 31 .............................G ACAGGGAATACAAGGGTGATGATTTTGAAAT 30072 30 96.7 30 ............................A. AGACCAGACACAGACACATCACTATTTACA 30012 30 96.7 30 .............................G CTAACAATCAAATTGTCTATAAAACATCAT 29952 30 93.3 30 ............................AA TAGTTCTCTAATTTCTTGTTGTGAATAATA 29892 30 96.7 30 ............................G. ATCTGCTGCGCTTATGAGCAATGCCAATGC 29832 30 96.7 30 .............................G TAGAAGTAACTCCAGTAGAACGCAATATCT 29772 30 96.7 30 ............................G. GAGTTGTTAGGTCGACAATCATGGGATTCT 29712 30 96.7 30 .............................A ACAGCCAACCACAGCCCGAAAAAATTACTA 29652 30 93.3 30 ............................AG GGTTTTTATCCCTGGTTCCAGGTCTCTTAC 29592 30 93.3 30 ............................AA TTGATCTACAGCATCGAGTTTATTTTTAAC 29532 30 96.7 30 .............................A CCGAAGATAAATACCAAGTTGTTGTTTATC 29472 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 29412 30 96.7 30 .............................C ATTAACGGCCAAGCGTGGACACGAGAGCAG 29352 30 96.7 30 .............................C CTCCGCCACTTGGATGCGCGACATTTTATT 29292 30 93.3 30 ............................AG TGAGAGTTTCTTTTCTTGATCTTGTTCAGT 29232 30 96.7 30 ............................A. AAAAGCCCCGATTAATTGGAAAGGGGGCGA 29172 30 100.0 30 .............................. ATCAAGGACGCCTTAAGAAGTATTGCTCAT 29112 30 100.0 30 .............................. TGCTAGCTACACCCTTATTGATTAGATCAA 29052 30 96.7 30 ............................A. GATGTATACAATGTTACGCGCATCTGAGAT 28992 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 28932 30 96.7 30 ............................A. CGAGCAATTGAACCTAGCATTTCCTCTGTA 28872 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 28812 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 28752 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 28692 30 100.0 30 .............................. GCACTGCAGAACGAGTTAAAAAGTTCATCG 28632 30 96.7 30 ............................A. AGAGAGCATCATTTGAAGTGATTAGATCAT 28572 30 100.0 30 .............................. TAAGGATTAAAACTGATTCAGGCTATCTAT 28512 30 96.7 30 .............................C TATGCGGAACAATATGATCGACTACGTTAG 28452 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 28392 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 28332 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 28272 30 100.0 30 .............................. GCACTGCAGAACGAGTTAAAAAGTTCATCG 28212 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 28152 30 96.7 30 .............................A TATTTGAGAAAGGGCCATTTAGCACTTAAT 28092 30 100.0 30 .............................. TAGGAATCCACCACATGACATGGTAATGAG 28032 30 93.3 30 ............................AA GAAGGAGCGAGAAGCCAAATTTTAGCTACA 27972 30 93.3 30 ............................AG TAGGGCGAGAGTAAGACAAATAATTCTGCA 27912 30 96.7 30 .............................A CTTGAAATAATTTGTTTTTTGCTTGGTGGT 27852 30 96.7 30 .............................G CTCAGCAGATAAGTAGCCTGTTTGTTGTGT 27792 30 96.7 30 .............................G CAATTCATTTACAGTTCTCGCCATAACAAT 27732 30 93.3 30 ............................GA TAAGTTTTAATTTGTGCGCCGATGCCACAC 27672 30 96.7 30 ............................A. CAATCACACAATCTTCATCCGAACCAAGAA 27612 30 93.3 30 ............................AC GCAAGCGAGTTGCTTCTAAACGAGCATCTT 27552 30 96.7 30 ............................A. CGTCATAAGCATTTAATCGAATACCCTCAA 27492 30 96.7 30 ............................A. CTAGTGTTATTGGGTGGGTAAAACGATTTA 27432 30 96.7 30 .............................G TTTGACCTGAATCCAAAACCAAATTAAAAG 27372 30 96.7 30 ............................G. ACAGGCTAATGTTAAGCCATGTCGGGTGGG 27312 30 96.7 30 ............................A. TCGGGGGTGATGTGAGTAAGCAAAACGATA 27252 30 100.0 30 .............................. CACCCCGACTTTGTAATTTCCTCCGACATT 27192 30 96.7 30 .............................G ATTCAACGGGTGGCAAAAATAAAGCTGAAT 27132 30 100.0 30 .............................. ACAGCGCAGGGATGTGCTGCGGGTATAGTA 27072 30 93.3 30 ............................AG CAATTCATGGTATGGGTTTTATTAGCGAAT 27012 30 93.3 30 .............C..............A. AAAGCAATATTGACCAATAAAAGTAAGCGT 26952 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== =============================== ================== 62 30 96.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGAGTGTTGAAGAGCGTATAGTTCATCAAGCGCAACGTCGAAATATTTCTTTGGATGAGGCTACGCAGCATTTTAAACAATATATTGAAAAACCTATTATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCAAAACGAGATCAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTAGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTATTTAACAGCTTAATAAAATCAATAAGTTACATCAAGTCGTTTTTTGATTGGGTAAATTGCTAAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : CATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCTTGATTGGCATTTGTTCTGTGTGTTCATTACGGAATTTATTTTAAGAATTAATAAGTGACTTATAATTCTTGTTCCAAAATTATCGTGTTATATGTCATTTAAAATACATAACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACTAACGTTTTTTTAGTGAAATTTTCATGCGTGGTTTATACCTCATCACCAATGATGATCCCATTCAACTTCTTTTAGAAAAGTTAGAGGCTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTTTGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGATG # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //