Array 1 86298-87379 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV787343.1 Enterococcus sp. HMSC14A10 Scaffold83, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 86298 30 100.0 34 .............................. GTCTTCGTGCTGCTGAACCTGTGCTTCTAACTCC 86362 30 100.0 36 .............................. CAAGCCAATTCCGACATTGTTTCTGTTGCAAAAAGC 86428 30 100.0 38 .............................. GCATTTGATTATGCAAAGGTAAATCGCTTATTGCAAAT 86496 30 100.0 34 .............................. TTTGATAGTTTAGGTTATTTATTAGAAACAAATA 86560 30 100.0 37 .............................. TAATAAAAATACTTATCCTTTAACAATTGGGATTGAT 86627 30 100.0 34 .............................. CTGGTAAAAAGAAAGAACGAGCTATCACGATGGA 86691 30 100.0 36 .............................. CCCTATGGAATAGGCTCACTAGAAGAAAAGTAACAC 86757 30 100.0 36 .............................. TCAGTATATTTAAAGGATCGTGATCCCTTTGACCTC 86823 30 100.0 36 .............................. ATTGCTCGCCCAGATGTTAAAAAGGCATTTGGACTT 86889 30 100.0 36 .............................. TTGGCACACGACAGGCGATAGACCTGATGGAGCAAA 86955 30 100.0 37 .............................. GTTAGTTCTCTAACCATTTGATCAATGGTCCACATTT 87022 30 100.0 36 .............................. GATCGAAAACAGTTATTAGCTTTTCAAATTACCCAG 87088 30 100.0 37 .............................. CCCACATGGTCGCTAAAAATACAAACAATATCCCCCG 87155 30 96.7 36 .......C...................... GAGCGCCGAAGACGAGTACCAACTTGATCCGCCATT 87221 30 100.0 34 .............................. GGCGTTGAGTACGAAATGGACATGACTGTAATGG 87285 30 100.0 36 .............................. TTCATATCCCGAAGGTCATGCTCTGCTTCTCTCATT 87351 29 90.0 0 .....................-..A...T. | ========== ====== ====== ====== ============================== ====================================== ================== 17 30 99.2 36 GTTCAAATCTAAAAATAGTGGAATGTAAAT # Left flank : TATGAACCTTTCAAAATTTGGTGGTGAAAATAATGTATGTCATTTTAGTTTATGATATTTCTTTAGAAGAAAAAGGCGCTCGTGTTTTGAACCGAGTATTTAAAATTTGTAAAAAATACCTAAGTCATGTGCAAAAATCCGTGTTTGAAGGGGAGATCACTCCTGCAAAGCTGAAAAAATTAGAACAAGAACTAAAAGAGTACGTTCGCGAAGACTTGGATTCAGTTTTAATCTTCAAAAATTCAAATAAGAAGTGGTTAAAAAAGGAATACATCGGAATTGACGGATCAGAACTAGTTTCGAATTTCTTTTAAGTTTTAAATCTGTCGATAGAGAATACCTTAAAAAACCGGTAGTTACGACAGACGATAGAGAATGTTGTGAATATAAGGTTCTTTTTGTTATCCAGTGTTATTTAATTTTAAAAAGGAAGTCATTTCTATGAGGTCGACAGAAATGAGTGAAAGAAGCCCTCTATTTCAATGTATAATAGTTGTGGG # Right flank : TTTGGGTAACTAGAAAAATTCCAACTGCGAGTTAGATATCTAAAATAAGAAATTAATTTAAGAGGTAATTGAATATAAAAAAGCATAGTACATTATTGAATTTAAGAGGGTGAGAAGAGATGAAAATCTATACGATTCAACGGAGAGATTTTCTGACATATACTGATTCACAAGGATTTATAATTCCTAAAAGAGATCCAGAATACTCTATCTTTACGGATGACGAAGAAGGGGAAAATTGTCTGTGAGCATTAGAATGGATGAAAAGGCAATTTATAAAACGGATGGACATACCTTTAGATCGTGATTTAATCTGGGTTTGGCCGGATATCTATGCGTATCTTTCAGAAAAAAATGACATTGATTTTTCGAGACATGCTCTTTTCACCTTTGAAGTCCCTGCAGCTTACTACAAAAAAATGATTTTATGGTCCAATTTTATTAGTTGGCATGAGGTCTTGAACCGGTTATGGGAAGGAGTCGCAGATGAGGACGAACGA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAATCTAAAAATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 89059-89730 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV787343.1 Enterococcus sp. HMSC14A10 Scaffold83, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 89059 29 96.6 36 ....G........................ CACAGGATTGGTCTTGATGCTTGTTTTGAAACAAAA 89124 29 96.6 35 ....G........................ AATTCTCCATCGATTCGAATATAGCGGGGTTCTCT 89188 29 100.0 36 ............................. GTTGATGTTCCAAATGAGGCATATCATGGAAGCGAT 89253 29 100.0 36 ............................. GCTGCTAGGTCCAACCCTACTTACTCAGCTGTAATT 89318 29 100.0 36 ............................. ACAAAGAGCGGTCTTGATTATTTCCCTCTTGATGTT 89383 29 100.0 35 ............................. ATTTCAAAAACTATAAAAGTGAATGATAGAAACTA 89447 29 96.6 36 ...A......................... ACAGCAGTAGAAGAGAAACTCATTGATATCAAGTTC 89512 29 96.6 35 ...A......................... CAAGTAATTGTTCCAAGGATCGGAATTTTAACAAG 89576 29 96.6 34 ....G........................ GTCATTGCCGTAGAGAAAGTATTTCCTGGGGCTT 89639 28 93.1 36 ....-...T.................... TTCCCTGACGCTTCAACACCTACGCCTAGCCCAGGC 89703 28 79.3 0 ..............C.A.-.....G..CG | ========== ====== ====== ====== ============================= ==================================== ================== 11 29 95.9 36 ATCTAAATCTAAAATAGTGGAATGTAAAT # Left flank : AAAAGGCAAATCTTGCTGCTTTTCACTTAACAAACTATATTCTTCTCGAAGTTGAGCAAGTAGATATAGATGATTTAGAAGGAGAGTTGTATGAAGTGTCTGCAGAATGTCGCTACGTTTGGGAAGCGATCCTTGAGAAAGCGACCATACAAGAAAAAGAGACAATGTTTACTTGGTTTAAAAATCAGCTTAAACATTCTAACTATGGGTTAAGTTATAGTGAAATTGAACAAATTTGTGAGGAATATTTTTAAGGGATAGAGTTTATGAGAGGGTAGGAGTGGATTCTGCTGATAAATCAAATATTCATCAAGAATTTCTAGTAAAAAGCTTAGTACAAGTGAACCAATCACAATTAAATTGACGCTATTTTTTTGGGGGATCTGTCGACCTCAAAAAATCAGAAATTTCTGTAGTTGCGACTGCAGCATGAAAATGTTGAATTCTAAGGATTTTCTGTTAAGAATACTGTTATTTTTGTTGAGTGATGATGTAATAAA # Right flank : GCAAATTATGTTATCACACAACCAATTCACCCAGAAAATTTCTCCAATTCCAAAGCACTAACCTCATAAAAAATCTACAGCCACCATCGCAAAAACACTTTTACCAGCTGGAGAGTGTTTTTTTTGTCTCTTTATTTATTCCTAAACTCTGAAACTTTCATCCGAAACGTGGGTGATCTTTGCTAAAATTAAGAATAAAACCATTATTTTTATAAGGAGAAGACCGATGCAGGAGAAAATAAAGGTATTGATCATTGATGATGATCAAGAGCTGTGCTCGATTATTGAACGGTATTTGACGCGTGCTGAGTATGAGGCGGCGTTTGCTCATACGGGTGCGGGCGGATTGAAAATGGCCTTAACAGGGGAGTATCACTTGATCGTATTGGATATTATGCTGCCGCAAATTGACGGGTTGAGCATTCTAACAGAGATTCGCAAGGAGAGTGTGGTGCCGGTCTTGATGTTGACAGCAAAGAACGAGGAGGCGGATAAGATTC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTAAATCTAAAATAGTGGAATGTAAAT # Alternate repeat : ATCTGAATCTAAAATAGTGGAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //