Array 1 1-1463 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLHE01000129.1 Acinetobacter baumannii strain ABBL105 contig-2000037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 61 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 121 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 181 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 241 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 301 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 361 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 421 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 481 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 541 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 601 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 661 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 721 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 781 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 841 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 901 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 961 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1021 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1081 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 1141 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1201 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1261 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1316 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1376 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1437 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 25 28 97.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 45-1512 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLHE01000266.1 Acinetobacter baumannii strain ABBL105 contig-4000018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 45 28 100.0 32 ............................ GATAATATTGGAACCAGAATATGACAATTAAA 105 28 100.0 32 ............................ TTCAGGACCAGGCATCTAAATTGTTACCTACT 165 28 100.0 32 ............................ TGGACTAATTTCTTAGTTACTGACCAACCTTC 225 28 100.0 32 ............................ TTCAGTAATGCAGCAACAATAGCCCCAATAAA 285 28 100.0 32 ............................ TGAACACAAGCAGAATTAGAAAACGTCAATTT 345 28 100.0 32 ............................ AAAACGACCTTGTGACTCTGTGAATTCAATCT 405 28 100.0 32 ............................ AGTTGCAACTTTAACAACTGACGGTACTGCTG 465 28 100.0 32 ............................ ATAGTGGAAATACACGTAAGTTATTGATTTAT 525 28 100.0 32 ............................ TGTTGTTAGGGCTATTTCTGCTTTATCCGATA 585 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 645 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 705 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 765 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 825 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 885 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 945 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 1005 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 1065 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 1125 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 1185 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 1245 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 1305 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 1365 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 1425 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 1485 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 25 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTAG # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5013-10500 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLHE01000076.1 Acinetobacter baumannii strain ABBL105 contig-1000074, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5013 28 100.0 32 ............................ TGAATAGGTTGTGGCTGTGGGCAAGTTTGATC 5073 28 100.0 32 ............................ CTGGTCAACACGAATTGGCAAATTAGATAACA 5133 28 100.0 32 ............................ TGCACTAAAGAAAATAAGAACTAAATATACTC 5193 28 100.0 32 ............................ AGTTGCAACTTTAACAACTGACGGTACTGCTG 5253 28 100.0 32 ............................ CATTAGTCTAAGAACGATTTTAAAAACATAGC 5313 28 100.0 32 ............................ ATTAAAGTGCAGAGATGAAGAAGTATTTTTAC 5373 28 100.0 32 ............................ TTATAGATGGCTTTAACTGACTCCCAGCCCAT 5433 28 100.0 32 ............................ AAAACGTTGAACATTAGTAAGTGTTAGAACAC 5493 28 100.0 32 ............................ TTACGATGGCCAACAGAAATATTAGACATATA 5553 28 100.0 32 ............................ GATAAAGGTTGTATGCGCTCTAAAGCGTTAGT 5613 28 100.0 32 ............................ AATCCAAACAGCAAAACCGATGATACCTGCAA 5673 28 100.0 32 ............................ AGTGGGCTTATATCTCTTCTATAAAAAACGGA 5733 28 100.0 32 ............................ AATGCTGCTGTTGACGTGGCTGGTCCAGTTGC 5793 28 100.0 32 ............................ GGAGTCAGGCACACTATTAGATAGCAGTGTGC 5853 28 100.0 32 ............................ ATGATGAACCTGTCTTACCTTCAGATCCTTCT 5913 28 100.0 32 ............................ AAGCATTTCAGTTGCACCAAGATGAATACTTT 5973 28 100.0 32 ............................ TCAAGTGCAGATGCAGCCTAATTATTCTTCTT 6033 28 100.0 32 ............................ AAGAACGTTTGGCAGCAAAAGGAACATTACCA 6093 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 6153 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 6213 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 6273 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 6333 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 6393 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 6453 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 6513 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 6573 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 6633 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 6693 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 6753 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 6813 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 6873 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 6933 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 6993 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 7053 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 7113 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 7173 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 7233 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 7293 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 7353 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 7413 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 7473 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 7533 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 7593 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 7653 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 7713 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 7773 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 7833 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 7893 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 7953 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 8013 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 8073 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 8133 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 8193 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 8253 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 8313 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 8373 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 8433 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 8493 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 8553 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 8613 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 8673 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 8733 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 8793 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 8853 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 8913 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 8973 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 9033 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 9093 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 9153 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 9213 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 9273 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 9333 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 9393 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 9453 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 9513 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 9573 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 9633 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 9693 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 9753 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 9813 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 9873 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 9933 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 9993 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 10053 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 10113 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 10173 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 10233 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 10293 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 10353 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 10413 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 10473 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================ ================== 92 28 95.0 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : ATTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //