Array 1 24908-23451 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOWY01000013.1 Collinsella sp. BA40 13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 24907 29 100.0 33 ............................. CGCTCCTCGAAGTCGGCGCGGACCTCCTCGATC 24845 29 100.0 33 ............................. GAGGAGCACGCGGCCAAATCCCGCGCCGTCTGC 24783 29 96.6 33 ............................T CAGCCGGACAATCCGCACGACTCCCAGGCCATC 24721 29 100.0 33 ............................. ATGATGCAAACGTCCTCGGGAACCTCGCAGCCG 24659 29 100.0 33 ............................. CTCGAATCCCCAATCGTGAAGACGAAGCGCGGG 24597 29 100.0 32 ............................. GCGCATCCCGTATCGCGGCAAGCCCGCCGATG 24536 29 100.0 33 ............................. CGTGGCGTTCGTATACAACGGTGTTGTCTTTGG 24474 29 100.0 33 ............................. CACTGCGGCTGGCCTAAAGAAAGTAATCCACAA 24412 29 100.0 33 ............................. CAACTTTATTCCGAAGGTTTCCAATCAGAATCA 24350 29 100.0 33 ............................. TGCGACATAAGTGCGAAACCTACTGCGACAACC 24288 29 100.0 33 ............................. CACGTCCGGCTCGCCGTCCTTGCCGACTCGTGT 24226 29 100.0 33 ............................. CAAACAATCCGCTGTTAAATTCTTCGTCAAGAA 24164 29 96.6 33 ............................T AATCGTATCCCCAGTCCTCGTACATCTTGCACA 24102 29 100.0 33 ............................. CGCCGATTGCTACCTTGTATACGTTGCTGCGGC 24040 29 100.0 33 ............................. CTGACTACGATCAAGGTGGGCGACGACAACGCA 23978 29 96.6 33 ............................T AGCCGTGTCGCGGGTCGGCGGCGATGCGCTCGG 23916 29 100.0 33 ............................. TCGATAGCCTCGACGATGATCGCTCCACCGTGG 23854 29 100.0 33 ............................. ATGTCCAGTGTAGGTGTATTTGTGAATGACTTT 23792 29 100.0 33 ............................. GAATCGCTAACAAGGTGTGGGAGCACAACCAAG 23730 29 100.0 34 ............................. TGCGATGCTGCGCGCACTGCACCGGATGCCATCT 23667 29 96.6 35 .............T............... CCCCCTTGTCGACCTCGGTCGTCGACTCGAATCCG 23603 29 100.0 33 ............................. GAGATAGACAACCTGATCGACCTCGCCGCGAAG 23541 29 100.0 33 ............................. TCGGCCCCGAGTGCGTGGCCATGGTCGACCCGG 23479 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= =================================== ================== 24 29 99.3 33 GTGCTCCCCGCGTACGCGGGGATGATCCC # Left flank : ATGCCGAGTCACTCGCTCTTTGGGATGACAAGCTCGGCGAAGTCGCGTATGGCAAGTCCTATGGATGCGATGATGATCAGGTGGGTGAAGAGTCATGATTGTGATAGTTGTGACCGCTTGTCCGCCCAGTGTTCGGGGAGATTTGTCACGGTGGCTGTTTGAGATATCAACAGGCGTGTTCGTTGGTCATGTTTCCGCCCGTGTCCGGGAGGCTCTTTGGACGAGGGTCACTGCTTTCGTAAATGATGGCAAGGCGATAATGGCTTATTCGGCCAGCAACGAACAGCATGTTGCGTTTCGCGTTCATCGGTCTAGTTGGAAGCCTAGGGATTGCGATGGTTTGGTTTTGATGGAGAGGCCGAACGGTTGCGAAGATGAGAGTTACTATGGAGCCAGGAAGTCAGGCTGGAGCGATGCAAGCAAGAGGCACAGGGCACGTCGCTTTGGATAAAGTGATGCAAAACTGCCAGACCGACCATTGGGATCGCAGGTAAATAAGT # Right flank : GCAATTACGCCACGGCAAGGAGCCGGGGCACGAGTGCTCCCCGCAAGCTCGGCATTCGCGCTGACAAGCTCGAAGTGCTCCCCGCGTTCGCGGGTTCGCGGTTCAGCGTGCATCTCTACACGCCTTGCGCTTCATCAGTGCGCGGCATGCGTAACCGCCTGCAGGCGACGTTGGTTTCGTCCCTGGACACCTTGATTTCTCCTTATTGGATCCCGTGTTCCGGTTCATTGCTGTGGTGTGATTGCATTAGGAGCAGCGTACTATTTGGGCAATAGCAAATGAGCGTTGCACGGCGAATGTATTCAGCTGCGTGCGTCCCCTATAATCCATATGTGGAATACAGAAGGAAACATTTATACAGGTAAGCAAGGCAATCAGGCATTTAGTGGACAGCGCTGGGACTAATTCGCATGCTGCATCGCTTGCGCTCGGCAAGTCCCGCGAGTGCGTTCGCAACGCGTCGAAGCGGCCCTCGCCGTCGCTTGCGACGGTTGCCGACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //