Array 1 132985-132199 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXWU01000012.1 Thermodesulfovibrio islandicus DSM 12570 H530DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 132984 37 100.0 39 ..................................... TCATTAGGATTAAGAGCAAATCTTTTCTCTTTCTTATCA 132908 37 100.0 40 ..................................... TCTTGCTGCAAACCTGGAAACGCACACTATGCAAGCGGTC 132831 37 100.0 38 ..................................... TGTTCTATTAAATCACTTGTTATTTCATATGTGTAGGT 132756 37 100.0 37 ..................................... ATATATAAATAATTAACAATAAAACAGGAATTACTAT 132682 37 100.0 38 ..................................... CTCTCAAGCATGTCAAGTAACTCTACATCATTAAATAT 132607 37 100.0 37 ..................................... ATATATAAATAATTAACAATAAAACAGGAATTACTAT 132533 37 100.0 38 ..................................... TTTTCAAATACTTGAAAATTTTGGTAATCATTTTCCCC 132458 37 100.0 37 ..................................... TCTAAACCTCCTTAATTTTTGATTTTCTTAAATCCGT 132384 37 100.0 38 ..................................... GGAATTACACTGTAACTGCTCCAACTCCTTAACTGTTC 132309 37 97.3 37 ....................................G AGATCTCTGAGCCATTTCGGCTCAAAGGGTTCTTTAT 132235 37 78.4 0 .........T.G..................CATTT.T | ========== ====== ====== ====== ===================================== ======================================== ================== 11 37 97.8 38 GTTGGAAAACAAGACCTCATTTAAAAGGGATTGCGAC # Left flank : AAACAGGAATATATCCCGTTTATTATTGAATAGAATGTTTATTGTAGTATCCTACGATATTTCTGACGATAAAAAAAGAAAAAAAGTTGCAGAATTACTTAAAGATTATGGAATAAGAGTTCAATATAGCGTTTTTGAATGTAATATTGACCAAAAATATCTAAAACAGATGATAAACGAAATTTTACCCTACATAGATGAAAAACAGGATAGCTTAAGGATTTATTATATTTGTGAAGGCTGTCGGGAGCGAGTAGAAACTTATGGATGTAAAATACTTCTTGACGAAGAGGGATATATTGTGGTATAAAATTACAATCTCGTGAGAGGTTAGAGGCTAAATTAGCTTTCGCTACAGTATCAACGATCTTTGACAAGTTTTAGACTTTAAAAAGTGGTAAAAATTTGAAAGTATTCACTTACATTTTAGCCCTCTCTGAGAGAGGTTACGGAAAAAGGCACTAAAAAGCCATAAAAATCAGTAAGTTACAAAGGCTACC # Right flank : ACCTTCAGAATCATGAGAAAGAGTCTCCTTCCAAGTTAAAACAAGAAATTTGAGACTTCAGGACTTAATTTTTGGAATGATATTAGGAATATTTTAATTTCTCCCTAAAAAGTGTTATATTTTTATATGTTTTTTGATGTTGAACTCCTTTTTTAAAAATACTTAGGATTATAGAAAAATCAAGATGAAAAAGCATATTCTTCTATGTGTAATTGGTATGACTCCACAGATAATAACAGAAACAATTTATGCACTTGCTAAGAAAAAAATTAATATTGAAGAACTTCATGTAATTACTACCTTAGATGGTAAAAGAAAATTAACTGAAACCCTTATCAATAAAGGCATTCTCTCACAACTTATATATGAGTATAACTTACCATCTATAAATTTTTCTGAGAAATCAATTTACTTAATTAAAAATTTTAAAAATAAGCCCCTCTCAGATATAAGGACACCCCTTGATAATGAATCCGCTGGGGAACTAATCTGCAAAGTAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGAAAACAAGACCTCATTTAAAAGGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 137347-137847 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXWU01000012.1 Thermodesulfovibrio islandicus DSM 12570 H530DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 137347 37 100.0 38 ..................................... AAAGGTATGCGTTTTATGTTAGCAATAGTAATTCCTGT 137422 37 100.0 39 ..................................... ATTAATAAACAGGATTTTATTAATGGAATTGACAAAGTT 137498 37 100.0 40 ..................................... ATATTAATGAAAATTGTTTACAACCATTTTTGTGTGAATG 137575 37 100.0 38 ..................................... GGTTACTTTCTTTGAGGATATTGACCCTGTAGTTGAAG 137650 37 100.0 41 ..................................... TGCCTCTTTATCCTCAATTTTTAATTCTTTGAATCCTCATT 137728 37 100.0 46 ..................................... TCATACTTGAAATTCCGAAATGGGAGCCTACATGGGCTGTTATCAC 137811 37 97.3 0 ...........C......................... | ========== ====== ====== ====== ===================================== ============================================== ================== 7 37 99.6 40 GTCGCAATCCCTTTTAAATGAGGTCTTGTTTTCCAAC # Left flank : TATATCTGAATCAATTATATAGTTAAACCCTTCTTGCAGCAAAGTTTCTACTTTTTTTACAGCCATTAATGCTGATTTGTTTTGTCTGTAACCATAAGAACAATTTAAAAAATCTTTTTCAAACTCTGGCTGAATGACAAGTAACACAGCTTCTTGAACGATTCTATCTTTTACTGTCGGGATTTTTAATAGTCTTTTTCTTCCATCGTGCTTATTTATTTCTTTTGCAATTAGAGGAGAAGGTTCATATAGTCCTTGTCTTAGAAGACTTCTTAATAAAACAAGGTTATTGTGTAAATTTGTCTCAAAGTCTTTTATTGATACATGGTCCACACCAGGACAACCACGATTGGCTTTGACTCTTTGCCATGCAAGATAAAAATTATCTTCGCTACATATTTTTTGCCAAAAATAACCCTCTGTATCCATGATTATGGATGATTTTTAAATTGGTTACTTGAATTTTAAACAAAATGAGAAATTTTGTTCAACAGCATTAT # Right flank : CGGTAGCCTTTGTAACTTACTGATTTTTATGGCTTTTTAGTGCCTTTTTCCGTAACCTCTCTCAGAGAGGGCTAAAATGTAAGTGAATACTTTCAAATTTTTACCACTTTTTAAAGTCTAAAACTTGTCAAAGATCGTTGATACTGTAGCGAAAGCTAATTTAGCCTCTAACCTCTCACGAGATTGTAATTTTATACCACAATATATCCCTCTTCGTCAAGAGTAGAGAATAAGTATCTTGCATTTTGTTTCGGATTTTTATCTGGCTGAATGTAAAATGCTTTAAAAACTCTTGTAATGAAATTAATAATTTATTAAAATTAATGGAAATATTTTTTAAACATTTTTTATGATTCCTGTTTAATTATTAAATTAAGTAAGTAGTATTTAGAGAGGAATTTCATGATTACAGAGATTGAGGTTGTCGCAAAAGGAGGACTTCTTTACAATATTGGTAGGGTTGCTTTGAGAGCAGAAGGTAATTTTAATGAAGAAAATTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCCCTTTTAAATGAGGTCTTGTTTTCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 28892-29178 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXWU01000002.1 Thermodesulfovibrio islandicus DSM 12570 H530DRAFT_scaffold00011.11_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================== ================== 28892 27 92.6 38 .......TT.................. TTGTCATTGATGCTTTTAAAACTCTCAGGTATCTGTGT G [28897] 28958 27 100.0 37 ........................... AGGGCTGTAGTTTTACCAGTGCCTGCATCTCCTTGGT 29022 27 88.9 36 ...AG......T............... TGCATAAAAGTTTGCTGCTTTTCGGTATATACTGAG 29085 27 100.0 40 ........................... AGTAGTTCCTGCACTGTTTTTAGATCTTCTCCATCCATGT 29152 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ======================================== ================== 5 27 96.3 38 TTTTATTCCACCATGTGGGATGAAAAG # Left flank : AAAATAAGCATTTCATTTATCAGGCAGTGGTTAATTTTAATAAGAATCTGTTTTTTATATCAATGAATGGAAGACGCTGTTTGGTTGACAGAGCTCTGTTACAGAGAATGTTGGATATTCTTCAATCTGCAGGTGGTGTAAACAGTGAGAATGTAAAAATTGTTAGAGATGTAATAAAAAGCTTTATATTTAACACTGGCACTGAAGAAGTTAAAGAAACAGAAAATAAGAAAAAGGCAAAAAAGAATAAAAAAGAGGAACTGTTTAATGCTTTATTTAATGAATTTAAGCCACTGGCAGATAAATTGGTACAGAATTCTTTTTTGATTAATATATTGTCATATTGTAGAAATGATTAAAAATTAGGTTTTAATTTTTTGATCATTGACAAGGCTGGATTGCGCGATTAAAGGTTCGATGCAAGAATATAGCGTTAGCAAAAGAGAGTGGAAATGTAATTTATTAATTTTTAATGTGTTTTTAGTAGATGAATGTTAGGG # Right flank : GCTTAACCGTTTTCGTTGCCCCCCAATAATGTAAAAATGTTTTAGTTTCACCATCATATGGGAAAAGTTACCAATACCACTAAAGTTACTAAGGTTACCAATATTACTTATATCACCTATGTTACTAAAGTCTCCTGCCTGTAATATAAAATTATTGACATTTCCACTGAATTTTTCTGTCTTTAATCAACAATTCTGCGGGGTTACCTGTTCGTTGCATATATTATATAGAAAATTTTCCAAAGGAGGAGAACATGGATTTAAAAGAGATTTACAGAGAATTTATTAACAAAACAGGGCTTAACTACAGACAGCAACAAGAGGATATGGTATTGCAGTTTGCAGACGCTTTAATGAAACAGAAAGTTGCCTTCATAGAAAGTCCTACCGGGACAGGAAAAACAATAGCTGTTTTAATGGCAAGTATTTGGGCAATTCAGAATGGTGTACCTCAAATAGTAATTTCTACTTTTAGAAAAGATTTACAGAGAGAGTATATG # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTATTCCACCATGTGGGATGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 32179-31822 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXWU01000002.1 Thermodesulfovibrio islandicus DSM 12570 H530DRAFT_scaffold00011.11_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 32178 28 100.0 37 ............................ TTAAAGAGGGTAGCATGAAAGCAGAGCTTGAACCTCT 32113 28 100.0 38 ............................ TGTAAAACTTTTCAGCATCTTCAACTGTAACATACTCC 32047 28 89.3 39 .................AA..C...... AAAATACAACACAACCTTGAGGATGGCTACATACTTGCT 31980 28 92.9 38 ......................AA.... AGATGACAGCAATAATAGTCCGGCACAATGTAAATAAC 31914 28 85.7 37 .................AA..C.A.... AGAGACCGGATCGAAATGCATCATATATGATATGAAC 31849 28 85.7 0 ...........T.....AA..C...... | ========== ====== ====== ====== ============================ ======================================= ================== 6 28 92.3 38 TTTTCATCCCACATGGTGGAATTGAAAC # Left flank : TACTTTGTGCTTGAGTTTAGTGCAGCACCACCTTCTTACTTTGGTGGGAGGTCCTATTTTCTCCACCCACTGAAAAAAGTTCCTTTTCGGTCTTATCCATTTCACTTCTGGATAATACTTCAGAATAAATCTCGTCACTTCAGGTGGATCCACTGCCGTGTAGTTGTAAAACACGGTGTATTTCACTCCTGCACGCTTTATAAGGTGAAGAGTGACTATACTATCTTTGCCACCTGAAAACTTCACAAGATAGCCTTCTTCAGGACAGTTCTCCTTAAGAAAGGCTATTGACTCTTCTATTTTGTTTGGGGAAAATAACATGCCCTTAATATATTGTGCAGGTGAGGTAACCAGAGGGGAGTAACCTTAAAAATTAAGGAAGAAATTAAGGAATGAATTCTATATAGTGAATATTAGGGTGGAGAATGTCACCTATTAATTTCCCATACGGTAAAAGAAAAACCAGCAGAATCGCAATGCGAGAATTAATCGCATAAGTC # Right flank : TCTCAACATCTATTTGCCAAAATATTTTAAAAATCAACAAATTATGTATCTTTTTATTTTTACACATACCACTTTTTTGCATCGACCCTCTAATTGTGCAATCCAGCCTTGTCAAAGATCACAAATCTACATTACAAATTTGCTTTTAAAGTAACCTAAACAACAATTACATTCTCTTCTCCATACTTCCATTTTAAATATGGCAAGTAATATTTATACAATTGAGAAGTCCTGCCATCTTTGTTTTTCCCTAAAATTCTTGAATCAAAAAGATGAATAATACCACTGTCTCCCTCTTTTCTGCCTTTACGACCCATGCCCTGTCTTGTTTTGTTGAATGTTTCATCAATACTTTCACGAAGAATTATCCAGTGAACTGTTTTTCGAATTTCTTGTTCAGTTTTATTTCCCCAAGTACCGCTTTTAATTAAGTGTCTTTCTTTTGCCTGAAATTCAGGACTGTCAGGATTTGGAAAAGGGATTCTTACAATATACAAATC # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:0, 3:3, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCATCCCACATGGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.30,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 82816-83759 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI519509.1 Thermodesulfovibrio islandicus DSM 12570 H530DRAFT_scaffold00009.9, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 82816 29 100.0 37 ............................. AAACCCTCCTTCATGTTTCTGCTATATAACTATTTAA 82882 29 100.0 36 ............................. ATTCCGTTTTGGATTTTTCACTCCCTGTTCGTAATC 82947 29 100.0 36 ............................. TAATTAATTTTTAAATATGTTTTGAAGTTTTTTTAG 83012 29 100.0 36 ............................. AATTCTTTTCTAACGAAGTTAATCCATTTCTGGACC 83077 29 100.0 39 ............................. CGTATCAATGCATGGTTCAAGTTCCCTACTACTCATCAT 83145 29 100.0 36 ............................. GCCTATTGCGGGGCTACATAGAGTTGTTAAGCTTGA 83210 29 100.0 35 ............................. TCTGAGAGCTTCAATATTCCGCTTGATATGTCTGT 83274 29 100.0 39 ............................. TTCACGCTCACAACCAGCTATTTCGGTAACAGACAAAAT 83342 29 100.0 35 ............................. CAGCGTGCGAGGATAAAAATAGCACGCACGGCATC 83406 29 100.0 37 ............................. AATCTTATTAATAAAAATCTCAAGAATTTCATAAAAA 83472 29 100.0 36 ............................. AAGTCATTGATTTTTCAAGATTTTTTTTGAAAAAAA 83537 29 100.0 36 ............................. CTTCCCAATGCTCTTGCATTTCCTGATTCAACAACA 83602 29 100.0 35 ............................. CTCACAAGAGCAAATATATCTCTCATCCTTAACTC 83666 29 100.0 36 ............................. GCAGGCTTGCTGTGCTTAGTGTTGATGAGGATATTC 83731 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 15 29 100.0 36 CTTTATATCCCACATGGTTCAGATGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAA # Right flank : ATGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTATATCCCACATGGTTCAGATGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [6.7-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //