Array 1 1214135-1210324 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK214998.1 Ectothiorhodospira haloalkaliphila ATCC 51935 EcthaDRAFT_EHB.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1214134 29 100.0 32 ............................. GTGGTGCGCATAGTGATCCGCAACCGCCTGGA 1214073 29 100.0 32 ............................. GTGTGAGGGGGAGGGGTGCTGTATCTACTGCG 1214012 29 100.0 32 ............................. TCCAGCGCCTCCACCCGCCCCATGTCGCCGTT 1213951 29 100.0 32 ............................. CAAACCGGCAACGTCTTTCTTCTGGTTCCCAT 1213890 29 100.0 32 ............................. CGCCTTCTCCGCATCGATCAGCATCTTCAATC 1213829 29 100.0 32 ............................. CCATTGGCGTATGAGGCCGATGGCATAAAGAG 1213768 29 100.0 32 ............................. CGCATGAGCGATTGGCGTGCCATGATCCCCAC 1213707 29 100.0 32 ............................. GCTGAGGCCATCCGGCCTGTCGGCAAGGCGGC 1213646 29 100.0 32 ............................. ACCTGGCGCCGGGCCAGCTTCTTCCACTGGCG 1213585 29 100.0 32 ............................. CACCCCGGGCGAAAAAACCCGACGTCGGGAAG 1213524 29 100.0 32 ............................. GGGTTCGATGGTGAGGATCTGTTCGATGCCCT 1213463 29 100.0 32 ............................. GGGTTCGATGGTGAGGATCTGTTCGATGCCCT 1213402 29 100.0 32 ............................. ATGTGTACGAAGATCAGCCCACCGACTCCCTC 1213341 29 100.0 32 ............................. CCAGGCCTGTAACCCTGCCGATGGTTGAGGCA 1213280 29 100.0 32 ............................. CCCATAAGATGCTTTTCACCCTGGCTCTGGAG 1213219 29 100.0 32 ............................. TGCCGATGTTTGACCCACGACAGATAGATCAG 1213158 29 100.0 32 ............................. ACGGGCATGTCCCATGAGGAAGCCCTGGCCCT 1213097 29 100.0 32 ............................. TCAGGTGTACATCGCCGGCCAGATGAGAACGC 1213036 29 100.0 32 ............................. CCCTGGCCGACCGCTGGGCCCGCCTCACGGGT 1212975 29 100.0 32 ............................. AATGGGAGGGCGCAGGTGAGTACGTGACCATC 1212914 29 96.6 32 ............................A GGGTATTTTGCATGGGGCCATCAAGGGTTCGC 1212853 29 100.0 32 ............................. TACTCATCAGCGCATACCAAAGGCGAAACGGG 1212792 29 96.6 32 ............................A TACGTACTGGATGGATGGTGTTGAGGTAAATC 1212731 29 100.0 32 ............................. GGCCGCAAATGGTTTGCCGAAGATATCGAAAT 1212670 29 100.0 32 ............................. TCAGTTTTGAGGCTGGCAAAAGAAAGCCAGCT 1212609 29 100.0 32 ............................. CGTCAGGCGGCGACCCGGACACGTTGTATTGG 1212548 29 100.0 32 ............................. CGCAGACCGGTGAAATCATTGATGGGCTGGAT 1212487 29 100.0 32 ............................. TTGGTACGCCTGGCCCTGGAGATGGGCTGGGC 1212426 29 100.0 32 ............................. CGCCAAATGCCCCTACTGGGACGTCATCACCA 1212365 29 100.0 32 ............................. TGTGAGCGCGGGTGATTTCACTTCGCCATCGA 1212304 29 100.0 32 ............................. TTCTGATGATGGGCTATGCGAAAACTACTGAT 1212243 29 100.0 32 ............................. CACTCCCCATCGGTCAGGTCGATTCCGCCATG 1212182 29 100.0 32 ............................. TGTGAACCCCTGGATCAGACTGATTGCGTGGA 1212121 29 100.0 32 ............................. ACCATCGACACCGCCATGAAGGAACTGATGCG 1212060 29 100.0 32 ............................. TCGCCCGACAGGTTATGCCGCACATTGATACC 1211999 29 100.0 32 ............................. AGCGGATGGCGTGTTGTCGCTGCCAGTGTATG 1211938 29 100.0 32 ............................. CAGGAACAGACCGAACCAGTGCAGGAACCTGA 1211877 29 100.0 32 ............................. GTCGCCCGGACCTCACGGATGAAGACATGAAG 1211816 29 100.0 32 ............................. CGCGTGGACGGCCCCCCTGGAGCAGTGCCCAT 1211755 29 100.0 32 ............................. TCCGTTCTCTATGGAAACGGCGCGCCCCAGTC 1211694 29 100.0 32 ............................. CTTGCGCCCGATTGGTGAAACTCGATGTCGAT 1211633 29 100.0 32 ............................. TCCAGTAAACGAAACGGATTTAGTGGAAAACT 1211572 29 100.0 32 ............................. TCCAGTAAACGAAACGGATTTAGTGGAAAACT 1211511 29 100.0 32 ............................. ACTCTCGATGCAGCAGTGAGGGCGATGCACAG 1211450 29 100.0 32 ............................. GGACGCGCTCCGCGCTCCTCGATGCGTTGCCC 1211389 29 100.0 32 ............................. CCGACCCGGCAGCAGCGATGCCCGCAACAAGC 1211328 29 100.0 32 ............................. TCTACCTTCACCGACCAAGCCATGCCCTACCT 1211267 29 100.0 32 ............................. CTGCAAATCAAGAAGCGGGACAATGCACATCA 1211206 29 100.0 32 ............................. GCGAGCGCATAAAGGCACGCCTGTGCCTCACC 1211145 29 100.0 32 ............................. TGGGACGAGGGATTCGACACCCAGCAGTAACA 1211084 29 100.0 32 ............................. GGGAGCGGGTAACAGTGGTTCCCAGGGAACTG 1211023 29 100.0 32 ............................. TTTCGAGGATGCCCCAGAACCGGAATGGCAGG 1210962 29 100.0 32 ............................. CCCGAGCATGACCCCGAGCAGTGCCAAGACAT 1210901 29 100.0 32 ............................. CCGGATTCTTTGAGCAGCCGACGCGCCTTGGT 1210840 29 100.0 32 ............................. TCTCCCGCCGTCTTGATCGCCAGGCCGGTCAT 1210779 29 100.0 32 ............................. CCATTCCAGCACTTCTTGGTGCGCCTGGGTAA 1210718 29 100.0 32 ............................. CTGGGCAGTAAATACAGCTTTTTGTATAGCCC 1210657 29 100.0 32 ............................. ATCCTCAAGCCCCCTGGCGCCGCTCTGCTGGT 1210596 29 100.0 32 ............................. CAGCTCATCGAGGTCAGCATGGACTCGGTGGA 1210535 29 100.0 32 ............................. AAGGACATTGAGACAGCGATCATGGCGATCCG 1210474 29 100.0 32 ............................. TGTGCGCATTGTGCTGCCGTATTGATTGGAGC 1210413 29 96.6 32 ....C........................ GGCAGATACTGATATTGCCGCGCTCAGGGCGC 1210352 29 89.7 0 .........................CTT. | ========== ====== ====== ====== ============================= ================================ ================== 63 29 99.7 32 CCGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : GGCGAGATAGATCCGCCGCCTCCGGCACCCGAGGCCATGCCACCGGCGATTCCCGAGCCGGAATCCATCGGCGACCAGGGACACCGGAGCAAATGACATGGCGATGCTGGTGGTGGTAACCGAGGCGGTGCCGCCGCGCCTGCGCGGCCGGCTGGCTGTATGGTTGCTGGAGATTCGCGCCGGCGTCTATGTTGGCGATGTCAGCAAGCGCGTACGCGAGATGATCTGGGAGCAGGTCGACGCCCTGGCCGAGGATGGCAACGTTGCCATGGCATGGGCCAGCAACCATGAATCCGGTTTCGAGTTCCAGACTTATGGCGCCAACCGACGTGAGGCGATCGATCATGATGGGCTAAGGTTGGTGAAATTTCTGCCCCCTCAGTCAACTGATTGATTCGCCGAGATCTTTAACAATTCGGTCTGTTTGAAAAGTAAGCAAAATCGTTGGTGGAATTCCCGCTAACGATTTTCTTCTTTGTAAACAAGTGGCTACAATTGGA # Right flank : CCCCCTTCATTGGTAACTGAGCTATCCATGCGCTGTGGATCTGAAGACATGCACCGATCGGGTCAAGCGGATGATCGATAAGTTGTCTGAGTGAGGCAGGCATTCACATTTCGTTGACGTAATATAACCCCAGAGGTATGTTCTACGGCAGTGTTGGGGCAGGAGCAAGGTGGTGCAGAGCAGAGACCTGATCAAGGCACTGGAAGCTGACGGCTGGTATCTCGACCGCATAAAGGGGAGCCATCATATCTTCAAGCATCCAACCAGGTCTGGATCGATTCCTGTGCCACACCCGAAGAAGGATCTCCCCATCGGCACCGTCAACAGCATCAGGAAACAAGCCGGGCTGAAGTAGCCCTGCACACAGACTTCACCTCGGCAGGAGAGAGCAATGCAATATCCCATTGCCATTGAATGGGGTGACGAACACACTGCCACTGGCATCGTGTTCCCGGATATTCCCGGTGCGATCACCGCAGGCGATACTGTTGAACAGGCCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //