Array 1 1073442-1071099 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040517.1 Luteithermobacter gelatinilyticus strain MEBiC09520 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1073441 36 100.0 30 .................................... GGCGGTATAAAGCATATCAAGGAACTTGGG 1073375 36 100.0 30 .................................... AGGGCGGCAACCTGCTTGGCAATATGTTTG 1073309 36 100.0 30 .................................... TTCAGGATTAAAATATGGTTTACGTTTAAT 1073243 36 100.0 30 .................................... TCGGCTTGTGTGTGGTCAATTACGGAACGC 1073177 36 100.0 30 .................................... GAAACCTGTATGCTCGCAACATTGCCGGCA 1073111 36 100.0 30 .................................... CTCAGCTCCGTGATCCCGACACGGTCAATT 1073045 36 100.0 30 .................................... ACATAGGCTTGACTCACCATAGGCCGAAGT 1072979 36 100.0 30 .................................... TCTGGGCAGCGGTTCTGGCATGGGGGCTAT 1072913 36 100.0 30 .................................... CATAAAATCCTTCTTAATGTAGATCTGGAT 1072847 36 100.0 30 .................................... GCGCTATCATAATAATTCATCTTATCCTCC 1072781 36 100.0 30 .................................... GGAACGTGACCGCACCTGATCCCAACAGAC 1072715 36 100.0 30 .................................... GGTGGCGGTTGCTGAGACTGTTCATAAAAT 1072649 36 100.0 30 .................................... GCAAGCCTCAAACCATAAGGCTTGTGGTTG 1072583 36 100.0 30 .................................... ACGGTGGTGAATGTTTCTGTGGTTGCGCCG 1072517 36 100.0 29 .................................... CAGATAAACATGTGTGTGAGCCCCACCCC 1072452 36 100.0 29 .................................... CTATGGTACAGTGAGACACATTCGAACCC 1072387 36 100.0 30 .................................... AGGGCCTCCGCCCAAACTGTTTTCCTTGCG 1072321 36 100.0 30 .................................... GAGCATTCCTTGTTAATGCTGGCTTATCTG 1072255 36 100.0 30 .................................... CCGCATGTTCTGGTGATCCTGACACCCTGG 1072189 36 100.0 30 .................................... AGAACCGCTGCCGGCCTCGGTGTGGGAAAT 1072123 36 100.0 30 .................................... AGCATGAAGACACTTTTGAAATACATACAC 1072057 36 100.0 29 .................................... CACTAAACAGAACGAAGGACAATTACGAG 1071992 36 100.0 30 .................................... GCAGTGGTTGTACCCACACCCTGTGCGCGG 1071926 36 100.0 30 .................................... GCAGTGGTTGTACCCACACCCTGTGCGCGG 1071860 36 100.0 30 .................................... CTACCCAGGCGATTTCTGAGGCGTTATCTA 1071794 36 100.0 30 .................................... GCAGTGGTTGTACCCACACCCTGTGCGCGG 1071728 36 100.0 30 .................................... TCTGGGACCCGACCCCGACTTCAGCTTACG 1071662 36 100.0 30 .................................... GATAGACTATGAATTGAAACAAAGTGCGAG 1071596 36 100.0 30 .................................... TCAAGGAGTTCACGCCAACCGGCAGAGTCC 1071530 36 100.0 30 .................................... GCAAAGACGCAGAAGCATTCCCGGCCTGAA 1071464 36 100.0 30 .................................... AGTACAACTGCCCGTTCCTGCGGGCTTCAG 1071398 36 100.0 30 .................................... GCATCGCCAAGGTGACCCAGTCGGCGCGCA 1071332 36 100.0 30 .................................... TCAACCATCTCATTGAAGAATTTCGAGGCT 1071266 36 100.0 30 .................................... GTGACGATCAAACTCGACCCCCTGGATAAT 1071200 36 100.0 30 .................................... CATATCTCCGCAAGTCCACTAATCATCACG 1071134 36 97.2 0 .............G...................... | ========== ====== ====== ====== ==================================== ============================== ================== 36 36 99.9 30 ATCATAGCATTTCAGAAATTGAGGTCCAGCTGCAAC # Left flank : CCTTGCCTCCTCTCTGGCCCAATCTCTGGCGGACGGTAAAGACCAGTTGGTTCTGCCGGGCGCTCCCTTGCCGCTGGATCAAGGGGTGAGGTGATAAAATGGAGTTGAGTGGGTACCGTATCATGTGGATGGCTGTCATGTTTGATCTGCCGGTGATGTCCATATCTCAGCGCAAAGCCGCCAGTAAATTTCGGAACTTTCTTTTGGATATGGGATTCGAGATGTCCCAATTTTCCGTATATTTAAGGTTTTGCAGCAGTAAGGAAAAAGTTGAAACCTACTGCCGCAAAATACAGCAAAATCTGCCGGAATATGGTAAAGTGAATATTCTGACATTTACGGATAAACAGTATGAAAACATCATCAGCTTTACAGGCAAAAAACAGAATCCGGCCTTTAAAAATCCCGATCAGCTTATCCTGTTTTAAACCGAACGGCGCTGTTTTCATCAGGCCAAACAGCAGAAAACCTCTGATTTCTCAGAGGTTTCCCACCATCGT # Right flank : ACTGGACGGCAGGCGCCCCCCTCCACCATAAGGATATCGCGATGAAACCTCATGTGCCGTTGTGAGCTATCCGGGGCGGCAAAAACAGTAAAAGAAAGACGACAAAAGCCAAAAATTTTCATATATGATTTTTTTTCTGAGTGAAATATGTTAACACCAGTGGAAATGAAACGCGGCTAGAGAATTCCAGTGACTGACACAGCTTCAAAAATTCCTGAAACGACACGGCCTTCAGACACCTCGGCGGAAAGCTTGGGCAGCCGTATTCGTAAAAAACGCAAACAAGCCAAACTGACCCTGAAAAAACTCAGCCAGATGTCCGACATCCCCGTCTCTACCCTCTCAAAGGTGGAAAACGGCTTGATGTCCCTGAATATTCAGAAACTGATGAAAGTCAGCCATGCGCTGGGGCTTGATGTCATGCAGCTGGTCACGCCATCCGAACCGACGATGCCCAAAGGCCCAGTTATCACAGGCCGGCGCAGCATCACAAAAACCGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATAGCATTTCAGAAATTGAGGTCCAGCTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 2029719-2031739 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040517.1 Luteithermobacter gelatinilyticus strain MEBiC09520 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 2029719 36 100.0 34 .................................... AGTCCCAGTTATACAACAATTCGCGAGCGGCGAT 2029789 36 100.0 35 .................................... TTATTTTCATTTGTCCCTCTTTGTCATTCAATTTA 2029860 36 100.0 34 .................................... TGATCCCCGAGGCGCGGGTGCGGGATAATCCCGC 2029930 36 100.0 34 .................................... CCCACTCTCCATTCGCCTTGCGCGCGCCGATCTT 2030000 36 100.0 33 .................................... ACCCCGTTTTTGTAAAGATTGCGGCCCTTTATC 2030069 36 100.0 37 .................................... GATCCTGTACCTTATAGTACAGGATAGGGCCTTGCTC 2030142 36 100.0 36 .................................... ATGATATAGATCATGTATTGCTTTTGTGATCTTATC 2030214 36 100.0 35 .................................... CCTGCGGCGCGGGCCAGACAGACTGCCACCAGCAG 2030285 36 100.0 34 .................................... TTTGTGGATTGTCGGTATCGCGCTTCCCAGTCGA 2030355 36 100.0 34 .................................... TCGAGGAGCTCTGCGGGGGATACACCATGATCCC 2030425 36 100.0 36 .................................... GTCCCAGTTCCGCCACAATTTGCGAGCGGCGATAAT 2030497 36 100.0 36 .................................... TTGGCCTTTGTGGCCAAGGAAGCCAAAGTTTTTTGT 2030569 36 100.0 34 .................................... TGATTTTAAAGGATGGATATATCGCATAACAAAC 2030639 36 100.0 34 .................................... AATGTGGAGCCGGGACAGGTCGTGTCCCAGCCAG 2030709 36 100.0 37 .................................... CTGCCCACTCCTGTTTGTCGAGCAGCTCCCGCATCTC 2030782 36 100.0 35 .................................... AGCTTCCTCGGCCCTGGCCTTGGCGGCCAGGTTTT 2030853 36 100.0 36 .................................... TTGTGGCCAGTCCGCGACCATATCATCGGTCGCGGC 2030925 36 100.0 35 .................................... CGGTGGCCCTTGTGGGTGTTTTGGTTAGTTTCATT 2030996 36 100.0 35 .................................... TTTATTTTCTCAATTATTTTATCCATCTCTTCCTC 2031067 36 100.0 34 .................................... GCGACATCAAATAATGTCGCGGCCCGGCACCAGG 2031137 36 100.0 33 .................................... AGAAGGGAGGTTTCAATCTCCTCCCCGAGCTCC 2031206 36 100.0 35 .................................... GGTATGCCAGCCCCCGTCTTCCTGGAGCTCGAGGT 2031277 36 100.0 36 .................................... ACCACTAAGTGGCCCCTATTCATCACATCCATTCAT 2031349 36 100.0 33 .................................... TTATCCTCAGTCGCAAGGATTTTATCCTTGCGA 2031418 36 100.0 36 .................................... TCGGTGTCTGCGATTAATTCTAGAAGTTCCGGCTCT 2031490 36 100.0 35 .................................... ATCATCGGTCGCGGCCATGAGCCGCTCAATCTCGG 2031561 36 100.0 35 .................................... GCGGGTGCGGGGGGCGATACCCCCCACAAGATTAA 2031632 36 100.0 35 .................................... CAGCTGTAGCGATCCATCAGCTCCCGGCCTGTGAC 2031703 36 91.7 0 ...............................C..TA | T [2031732] ========== ====== ====== ====== ==================================== ===================================== ================== 29 36 99.7 35 GTTTGAATAACGCCCCGTTCTTCAGGGGATTGAGAC # Left flank : GATTCAGTATTCCTTGTTTCTATGCAGTCTCACGGAAACCCGGCTTGCAGAGTGCGTCGCCATGATTGAAGAGATCATCAATCCGCGCGAAGATGATGTCAGGCTGTATCCGCTGCCCACCAATTACTGGTCTTTCCGCTTGGGTCGGGCCGTGCTGCCCGACGGCATAGTTCATACCGATCTGCCTGCCAGCTGGCGTGGGGAAAAGGCCAAAAAGCCGCTGACCACAGATCCGGCCATGAACGCCGATTTTTCCCGCAAAAAACTGGTCCGCCGCCTGGATGCCACGACACGTAAACTGATTGCCACCACTCAGACCGGTCAGAAAAAAGGCCTTTATTACATTCCCTAAGTCTCCTAAAACACACTTTTTAAGAGCTCTGCACCAACACAATACACCCATACAGGACATATTCATGAGACAACTGAGGAATTTGAATTATTTCTGTCTATTCACCCCGGCAAGCATTTATTCTTGCAAATAAATTTCATATGGTGCA # Right flank : AAAAATTCCTGCGTCAGGGCTATGCCAATATTGGCATGACTTTTTTATTCTTCTGAATGCAGTAGATCTTCCTCACCAACAACATTCAACAAGAGGACTATCAAAATGAGGAAACGTTTTATTGCAACCACACTGATCTCAACCACGCTTTTTGCCGCCGTGCCGGGGGGTAACGTTGCCCAGGCAGAGGACAAAAACCCCTTTGCCGGCGCCTATGTGGGGGCGGAACTGGGGTATGAAAGTTATTCCTTTGACGATTTCGAGGAATTCAACAGTGGCGGCCTGTCCTATGGTGGTCTGTTGGGATACCGGGCCGCTGTGTCGCCTCATATGCTGTTAGGAATCGAAGGTTTCCTTGGCGGCGATACGGCGAAAGAGGAAGTTTATCTGGGTGGTATCGGTACGATCGAGGTCACATCCGGCACAACCTGGGCCATCAACGGCCTGGTCGGTTTTACCCGCAACAATGCCCTATTCTTCGCGACGCTGGGCTATGGCGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAATAACGCCCCGTTCTTCAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 3034744-3033190 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040517.1 Luteithermobacter gelatinilyticus strain MEBiC09520 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3034743 36 100.0 30 .................................... TATTTGTGCCGATTTTCTGGCGGGTAAATT 3034677 36 100.0 31 .................................... GAACCCCTGTCCGAACTCGACGAACTTGTTT 3034610 36 100.0 30 .................................... AATCTGCGCCGATTTCTTAGCGGGTAAACT 3034544 36 100.0 30 .................................... AGTCCGCTCACCCTCATGACCTCCGGAATA 3034478 36 100.0 30 .................................... TTATGATAGTACAGGGTGTGCCCTTTGCTG 3034412 36 100.0 30 .................................... AAAGAGCTGGAGGTGGCACATGGCGACGAA 3034346 36 100.0 30 .................................... ATATGAAATGGCTTATCGCAGGACTAATCG 3034280 36 100.0 30 .................................... CGGTTTCTCTATCGACTGCGAGGCGTACTT 3034214 36 100.0 30 .................................... ATGCCCGAGAAATCCCCGATACAGGGGATT 3034148 36 100.0 30 .................................... TCTTAGCCTCACCTTCCAGGTTTACGATCG 3034082 36 100.0 30 .................................... GCAGAGGGGATTAAGCGTCTCGCGGCTGAT 3034016 36 100.0 30 .................................... CGATACCCACATGGCCCGGTTCACGATTAT 3033950 36 100.0 30 .................................... AAGATAGGTATAAGATAGATAATAATTAGG 3033884 36 100.0 30 .................................... ATGATTATTGAGCATGGCGCAAAATTCAAG 3033818 36 100.0 30 .................................... CAATGATGCCAATCGTCCACAGGGGATATC 3033752 36 100.0 29 .................................... CGCTGCAACATCCGCTCAACCTCAACATG 3033687 36 100.0 30 .................................... GTCCCCTACGAGTAGGCGACAGGCCAGTTG 3033621 36 100.0 30 .................................... CCTCAGCGCTCAACAGAACGAAGGACAATT 3033555 36 100.0 30 .................................... TGCTCGATAGTGCGGATGTTAGATTTGTGC 3033489 36 100.0 30 .................................... CTTAATCATGACGGGGTTGATGATCCTGCT 3033423 36 100.0 30 .................................... CGGGTCATGCGGCCCGTTTCCAAACATCTG 3033357 36 100.0 30 .................................... GACAGACCCTGTTTTAAACGTGACATATGC 3033291 36 100.0 30 .................................... CAACAGATACATGGGGTACATGCCCAGAAG 3033225 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 100.0 30 ATCATAGCCTATCGGTGTGAAAAGGGAAGCTATGAC # Left flank : GGTGCAGACCCTGACCAATGCGGCGGATCGGGTCGCCAGCAGTCTGGTCCGGGCGCTGCGGGAAAAAGACAGCCGGTTGCTCCATCTGCCTTTGTTTGCGGTGTAGATCCTCATGAGTCGGACGGGAGATAAATATATGTGGATTTTCGTTATGTTTGACTTGCCGACCACTACAAAAAAGGAACGGCGCCATGCGACACGGTTCAGAAAGTTTCTGATTCGGGACGGATATATGATGCTTCAATATTCAATTTATGCTAGAATTTGCAATGGTTTGGAACGTGTTGAAAAACATATGAAACGGCTGGAGCTGGAATTGCCGCCCAAAGGCAGCATCCGCGCCATGCAGATCACCGACCGGCAGTATAAAAATATCAGGATTTTGCTTTCAAATGCCCCGGAATTTGACGAGACCCACCCGAAAAACAACAGCGAACAGCTCCTTTTACTCTGAGCTGTTCGCTGTTTTTCCTGCTATATCAGTCACTTATCTCTGACCT # Right flank : GCTATGCCGCAACACCCGGACGCCGGTGGAGATGATCATCTATCCCGATGAATATCATGTCAAATGGCAACCTACCCACAAATATCTGGTGTATCGGCGGAACCTGGATTGGTTCAATTTCTGGCTGCGCGGGATTGAGGACCCGGCCCCGAAAAAGGCCGCGCAATATCAGCGCTGGCGTAAACTGCGCGACTTGCAGCCCTGAGTATTAACCCAAATATCAACCAGCCCCCGATAGAGTCTTCTGGGGGCTGGTTTGGTCATCGTCGCAAGGTGCGAACAGGAAGTCCGGTCAGCCGGCGACCACGTTGCGCAGCTGTCGGGCGGCAAAGCCCAGCTTGGTCACGTTGATCTGGCCGGTGGACTGGAATTCCTTGATCAGTTTGTTGATCCGGGCCCGGGCGGCCTCGGAATTCTTTAGCCACGCCTTGACGGAATCAATGGCTGCGCCGTTTTCATAGGTCTGGATGGCGTGGCGGGTGAGCAGTTTCTGCTGATCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATAGCCTATCGGTGTGAAAAGGGAAGCTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //