Array 1 64907-65134 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV794797.1 Corynebacterium sp. HMSC070E08 Scaffold470, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 64907 36 100.0 28 .................................... CGCCACACCATAGGCGGTGCGGGCCGAG 64971 36 100.0 28 .................................... GCCGACACCGAGGGCTGCCCAGAGCAGG 65035 36 97.2 28 A................................... AGGAGTCCGAGGTGAAGGGCATGACTGA 65099 36 91.7 0 .................................NNN | ========== ====== ====== ====== ==================================== ============================ ================== 4 36 97.2 28 GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Left flank : ATCGCGATGACGAGCTCATCGATGCGCTTGGTTACGCCCTCCAGCTCACGGAGGAGATCCGTCGGGTTCTCATCCGGTTCATCGCCTTCCTGGATGCGGACGGTTGCCGCGAGTCGGTCACTCAGCGAGTTGAGGCGCTCCTGCGCCTGGGCGCGCTCGGCCAAGGCTTCAGCAAGTAGCATGGTTCCTCCTTAAGAAGTTAGAGCAATCAAGTTAAGGCTACGACGCTCCGCTGTCAATAGGAGATGGAAAGAATTTCAAAATCGTCGTGACAGCTTGGACTCCATGGTCAAGGGAATCAGCATCATCGGCTGGGGTTCAGTTCTCATTACCCCTGATAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCAGTTCTCATTACCCCTGATAGACTTCCGCCGCCACCCGGTTAATTTATCCAGAA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTCAGTTCTCATTACCCCTGATAGACTTCGTGCTTCAGACGGTTACGCACGCCCTCAGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCAGCACCCCCCACCGCTGATGCCCAAGCTTGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCACGCCGACGAGGAGCAGCAGGCGCTCCGGCTGGGGTTCAGTTCTCATTACCCCTGATAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTCAGTTCTCATTACCCCTGATAGACTTCGCCCCTGTAGGCGTAGTCATTGAGCAGCGCTGGGGTTCAGTTCTCATTACC # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 65291-65455 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV794797.1 Corynebacterium sp. HMSC070E08 Scaffold470, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 65291 36 100.0 29 .................................... AGCACCCCCCACCGCTGATGCCCAAGCTT 65356 36 100.0 28 .................................... ACGCCGACGAGGAGCAGCAGGCGCTCCG 65420 36 88.9 0 ................................NNNN | ========== ====== ====== ====== ==================================== ============================= ================== 3 36 96.3 29 GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCAGTTCTCATTACCCCTGATAGACTTCCGCCGCCACCCGGTTAATTTATCCAGAAGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCCGCCACACCATAGGCGGTGCGGGCCGAGGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCGCCGACACCGAGGGCTGCCCAGAGCAGGACTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCAGGAGTCCGAGGTGAAGGGCATGACTGAGCTGGGGTTCAGTTCTCATTACCCCTGATAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTCAGTTCTCATTACCCCTGATAGACTTCGTGCTTCAGACGGTTACGCACGCCCTCA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTCAGTTCTCATTACCCCTGATAGACTTCGCCCCTGTAGGCGTAGTCATTGAGCAGCGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCGCGGGGCCAGCCACGCCTGATTCTTCTGGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCAGTGCAGCCCCAAAAGGGCTGTTCTACTGGAGTTTATCGGTGATCCTTCGCTAAAAAATCGTGAGTTGAGGTGGGGTATTCTCCATTTTGGAAGGTTCCGATTTGGAAAAACGAATCGCCTTTGACCATTGAACATCAGTGACGGATATGATTCTCACATCTCCGTCTTCCGGTAGGCTGGACTTGATTTGTTTGACGGTACTTGCGATACGGGAAGCAAGAGGGAAGTACTGGACGTAAACGC # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 3 65547-65710 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV794797.1 Corynebacterium sp. HMSC070E08 Scaffold470, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 65547 36 86.1 28 NNNNN............................... GCCCCTGTAGGCGTAGTCATTGAGCAGC 65611 36 100.0 28 .................................... GCGGGGCCAGCCACGCCTGATTCTTCTG 65675 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 3 36 95.4 28 GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Left flank : TTCTCATTACCCCTGATAGACTTCAGGAGTCCGAGGTGAAGGGCATGACTGAGCTGGGGTTCAGTTCTCATTACCCCTGATAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTCAGTTCTCATTACCCCTGATAGACTTCGTGCTTCAGACGGTTACGCACGCCCTCAGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCAGCACCCCCCACCGCTGATGCCCAAGCTTGCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTCACGCCGACGAGGAGCAGCAGGCGCTCCGGCTGGGGTTCAGTTCTCATTACCCCTGATAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CAGTGCAGCCCCAAAAGGGCTGTTCTACTGGAGTTTATCGGTGATCCTTCGCTAAAAAATCGTGAGTTGAGGTGGGGTATTCTCCATTTTGGAAGGTTCCGATTTGGAAAAACGAATCGCCTTTGACCATTGAACATCAGTGACGGATATGATTCTCACATCTCCGTCTTCCGGTAGGCTGGACTTGATTTGTTTGACGGTACTTGCGATACGGGAAGCAAGAGGGAAGTACTGGACGTAAACGCTTAGTTGGGATCTACAAAAGCCCAGGTCTAAAAGATGGTTTCGAAACCGGTTAGCCTCTCTGGTTTGAATTTTTGATTTTACGGGAAGATCGAACATGACCACGCACCACATTGGTTCACTATCTTTCGCCGGCATCGAGTTTTCCTTCCCAAACCGGAACTTTTAGGTGATTTATATTTCCTTCGATGTATAGGCCATATTGTTGGCTGAAGTCATTAAAAACTGTGGTCAACGATTTTCCACTGGAATCGAAC # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.42 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //