Array 1 1304906-1308566 **** Predicted by CRISPRDetect 2.4 *** >NZ_LS974202.1 Mesotoga infera isolate MESINF1 chromosome MESINF, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1304906 30 100.0 36 .............................. ATTGCAGACGACTATGCACAACTAGACGTGATTAGA 1304972 30 100.0 39 .............................. ATGGTTGTAGTACCATCTGTATATACAAATTGGATTCTC 1305041 30 100.0 36 .............................. CCACACTTTATGACAATGTTTTCAGTTCCGTTCAGG 1305107 30 100.0 34 .............................. GCTTTACCTACGACCCTACTCTTGTAGAGGCCGT 1305171 30 100.0 38 .............................. TAGTATTTTTCAAGCTCTTTCTTCACATCGTAGAGCGA 1305239 30 100.0 40 .............................. CTTCTCTCTTTTCCACGACGTTGCGCAAGCGAGCTGCGCC 1305309 30 100.0 35 .............................. ACTGTGATTGAGAACTCTGGCAGATTGATTGTGTC 1305374 30 100.0 36 .............................. AACGAAAGAGCAACAGGAAGTTTTGAGTCTGGCGAG 1305440 30 100.0 35 .............................. TCAGGTGAGTTTCAATTTCGCCTGATAATATTAGG 1305505 30 100.0 39 .............................. AAAATCAGTTCCCCGGCGGAGAGGCTTATACTTTTGATC 1305574 30 100.0 37 .............................. AAAGCTCGAACGTGAGCACGCCCGCACTCGGACTTCC 1305641 30 100.0 36 .............................. CGCGCCCCTCTATGAACTTCTTTCTGAGTGACTTCA 1305707 30 100.0 36 .............................. CGACCGGCGGGATCCCCTCGAAAAACTCGACGATGT 1305773 30 100.0 36 .............................. GTTCTATTGTCTTCGTGAATGCCGCGTCCGCTTCTT 1305839 30 100.0 36 .............................. TACTTCAATTGCCGAGAAGTGTGCGTGAAGGATTCT 1305905 30 100.0 33 .............................. TTCAAACTGTCGTTTTCAGAGTCCGTCGGACAC 1305968 30 96.7 36 .....................T........ ACCGACACAGTCGGTACAAATGCAACTACCAGCTAC 1306034 30 100.0 39 .............................. CTTCTCTTTTTTCGACGACATTTCGGAGGCGAGCTACAC 1306103 30 100.0 34 .............................. GTTTGCGCTGATTCCGGCCCTCTCGGCCAGTTCT 1306167 30 100.0 35 .............................. CGTCATCCCACCATTCGTGTCTTGTTGCAGAGACG 1306232 30 100.0 38 .............................. ACAACATGAGGGACTACCCAAACATAATACTGTATTGC 1306300 30 100.0 38 .............................. TTGCACGAAGCGGTACACGCAATGTGTGACACATTTCA 1306368 30 100.0 36 .............................. TTGTGATATTTCCGGGGCCATAAAGATATATCCCCC 1306434 30 100.0 33 .............................. GCAAGCCGGCGACAATAAAGATAGACGGTCCGA 1306497 30 100.0 36 .............................. TCTTTGCCGAGATGTCTCTGGATGACATGCCCTGGC 1306563 30 100.0 36 .............................. AAGGTACAGATTTTTTACCTGAAGGAGAAGTGTCTG 1306629 30 100.0 38 .............................. ATATAAAAATTTTTCGTCGTAACAATAGGTTTGTTAGC 1306697 30 100.0 35 .............................. ATATACCAGTGCATTTCTAACTGGAATGATTTCTC 1306762 30 100.0 35 .............................. GTAGGCCCGTCTCCGATCTCGTTGATATAGAGAAA 1306827 30 100.0 35 .............................. TCTTCAAATGTCTGATAGAAAAGAAGCATCTGGTC 1306892 30 100.0 35 .............................. CTCTCAACGACATCTCGGGATATGCCAGAAGCGGC 1306957 30 100.0 35 .............................. TACCTATTGATGAAGACTTCCCGAGTTTCGAGCAG 1307022 30 100.0 33 .............................. TCGGTCGAGTGATGTACTCCGTGCAGGCTGAGT 1307085 30 100.0 34 .............................. CTCTGACGAAAGCCTCTGAAAGTACGGGCGCTCC 1307149 30 100.0 33 .............................. TTCCGGCCCTCTCGGCCAATTCCTCTTGAGACA 1307212 30 100.0 35 .............................. CGAAACCGAGAAGCTCTCAAAAGCCAAAGACAATC 1307277 30 100.0 36 .............................. TATCTACGCACACCTCGAAAATCAATGGACTAGCGT 1307343 30 100.0 33 .............................. CCGGTATACCTATACGATCATTCAGGAATTACC 1307406 30 100.0 39 .............................. TTCTCCGCGAGAGCCATGAAAACGCTTGCATACGCCCTT 1307475 30 100.0 36 .............................. AGGAGAGGCTGGACTCAATAGGAAAATCCGAGAACG 1307541 30 100.0 36 .............................. TAACAATATAATCAGGATATTTATCTAGCTCCTCTA 1307607 30 100.0 41 .............................. CCGATCCAGCCTTGATATGATTGGCCTCTATGGCGTCAGCC 1307678 30 100.0 34 .............................. AATGTCTATCTTTGTCATCTGCAAACTCTATATT 1307742 30 100.0 37 .............................. CCAAACAGCTTGATGAATTTCGAGCTGTGATTGCTTT 1307809 30 100.0 37 .............................. CCCAGAACGAGGCGAAAGACTTGAAGAAGATTGCTCA 1307876 30 100.0 39 .............................. TTCTCCGCGAGAGCCATGAAAACGCTTGCATACGCCCTT 1307945 30 100.0 36 .............................. TAACAATATAATCAGGATATTTATCTAGCTCCTCTA 1308011 30 100.0 41 .............................. CCGATCCAGCCTTGATATGATTGGCCTCTATGGCGTCAGCC 1308082 30 100.0 34 .............................. AATGTCTATCTTTGTCATCTGCAAACTCTATATT 1308146 30 100.0 36 .............................. TATCTATATATTCACGTTCTTTTGTAGGAGGGTATA 1308212 30 100.0 37 .............................. GTGAAGTGTTGTCGCTGTTCGCACAGGAAACACGCGA 1308279 30 100.0 36 .............................. ACATTCCGAATACCCCTGGATGATCGCAAACATCGA 1308345 30 100.0 35 .............................. TTGCTGGCTACCGCATGGATAGCCAGCGTAAAGCA 1308410 30 96.7 34 .....................A........ CTTCGATCTCTGTTTCTCGTAGGAGGCAAACATG 1308474 30 90.0 32 .................A...A..G..... TCCAAAGATAAACTTGAGCTGAAGATTATAAC 1308536 30 93.3 0 .................T...A........ | G [1308560] ========== ====== ====== ====== ============================== ========================================= ================== 56 30 99.6 36 GTTTCGAATCAACCAAAGAGGGATATAAAC # Left flank : GAAATGATAGGAATGGCTGACTGGAAAGGGTTCAAGAAAAACATAGTGGCTAAATTTGTGGTGAATGTGAGCCAGAATTCCCTCTGGAAAAGGGAAAAAACGGAACTGGTGAAACTGCTGGAACGTAGTTTTGGTATTAGCGACAGAAAACTGCTCCGTTACGCTAAAGGGATATACGTTGTAAAAGGTTTTACATACGACAGAGAGCTCGGCTTGAAATAACGGCTGTGGTCTTTGACAATTCCGTCGACCTGAAAAGAGGGCAAAACGCCGGGGGATCGACGCAATGGCTGGTTTCATATTGCAGAGCCATTTTTCGCGATCAAACTCCCGGGAGAAGTGCGTTGAAACTTTGCCCGCCTGTGCAAAAAAAGCGAGGTTGACGAAATAAAACGCAACATTCCTCTGAAAAGCCTTCGCAAGGGACAATATGGCTGATTATGCGGCGACTTCTAAAACCACCGGTTCATAAGCTTTTTTATTATAATAATAGTAAATGG # Right flank : CAGGCTTAAGAGACTTGAATTTTTCCTATGAAAGGCGTAGCAAACGTAACTTTCGGATGTTAGCATTAACCTTGGAATCATAATTATCAAATAGTGAATTTAAACGATGTAATTTTTATTTGCTGCGAATTATCCAACGAGGAGTTAGAGCCGGTTTGTCCGGCTCTTTCGCTTTCAATCATCCACGACACCAGGGTATGGAACTGCCGTTCGGAAGAGCGTCTCTTCGGTACACGATTAAGAATAGGTCGATCTGCCCAGGGTACCTCTTTGATCATTCAAGACCCAAAAGCGGAAATTCGCTGACCTCGCTGTATCACTCTCCTTTCAAATGGTTTAGCTACAACAACTAAAAGACTGAAGCTGAAGATGAATAAGTCAGACTTTGAGATAAAAGAAAGATGCGAAAAAAAGCGTCCCATTTTGTATCCGAGACACCCTACATAAAAACGAAGTCCTCGAGATAACTTAATTGATAGGTTGACAACGCGAAATCCTTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCGAATCAACCAAAGAGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 1331753-1340427 **** Predicted by CRISPRDetect 2.4 *** >NZ_LS974202.1 Mesotoga infera isolate MESINF1 chromosome MESINF, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1331753 30 100.0 37 .............................. ACATTCGTGTACGCCGCTAATGAAGCGGAGATGACTA 1331820 30 100.0 35 .............................. ACAAACTTTTCAACTTTGACGAGCATGAGAAGCTC 1331885 30 100.0 38 .............................. AGGAACGCAAGCTGTCTATTGACGTTCTCTATCTTGCC 1331953 30 100.0 34 .............................. TAGTCGGCCCACTCGAAACCTTCCAGTTTTTGAA 1332017 30 100.0 37 .............................. CTCCATACGTCTGAATATGCCTTGTACGAGTCGTTCC 1332084 30 100.0 35 .............................. TCTCTAATCAGTTGTAATCGCTGAAATCTAGCTAA 1332149 30 100.0 34 .............................. CTCGGATACCAATAATCCCTAAAATACCCTTCCG 1332213 30 100.0 39 .............................. TGATGAAACTAACGCTTTTCCATATAAGAGCAAAGGCAC 1332282 30 100.0 38 .............................. TTTCTACGCCTTCCACAGCCCTACGAAGGACTGCTCCT 1332350 30 100.0 32 .............................. TCGCGGCGGTCGAAGCCGAGATCAAGGGTATC 1332412 30 100.0 39 .............................. GTCCACTTCTTGAGCGCTTCGTATCCGAGAATTATCTTT 1332481 30 100.0 34 .............................. CTGGATTCTGATCCATATATAAGGGAGTGGTGAC 1332545 30 100.0 35 .............................. GCTTCTCTGCTATGTCAGTCACGGGCTTGGCTATG 1332610 30 100.0 34 .............................. ACTTCTCCGTTTGTTTTGTTCCTACATATGACCT 1332674 30 100.0 35 .............................. CAGGCTTGCAAACTACGACATACGGTACAGAGACC 1332739 30 100.0 34 .............................. GCCAACGCTTCTTTGTCTTGCTTTTCCCATGCTG 1332803 30 100.0 34 .............................. TCTCGCCAGTCAACGTAGAGTTCGCCAGTCGTGT 1332867 30 100.0 34 .............................. TGAGCCATCTGATATTTCCAGACAGCTTCTTCAC 1332931 30 100.0 38 .............................. ACCAGCGCATAGAAAGCGCTGCTAAGTCTCTCTATCTC 1332999 30 100.0 34 .............................. ATGTTGTATCAATGGTTGTAGTACCATCTGTATA 1333063 30 100.0 35 .............................. TAGTCAAATTGAAGACCGAACCCAGGTACGAGACG 1333128 30 100.0 38 .............................. TCCGCTTCTGCCAGTCTGTCCACGAAAGCCATAGCCTC 1333196 30 100.0 37 .............................. ACATTCGTGTACGCCGCTAACGAAGCTGAAATGACTA 1333263 30 100.0 33 .............................. TAAATTTTTTAGTAGGGGTAACGGTTTGGTTTG 1333326 30 100.0 39 .............................. CTATCATGAATACGAAACTGCTGGAGACTACGATGTTCA 1333395 30 100.0 35 .............................. AGTTCAACCCTGCCGACGAATGGGCCGTTCCTGCC 1333460 30 100.0 34 .............................. CCGTACAAGTCAAGACCATCGTTTCTATCATCGC 1333524 30 100.0 34 .............................. GCACCTCACAGGTGTGGGGAATGAAACATATCAG 1333588 30 100.0 35 .............................. TCAGCTCCTGGAGAACTCGGGTATAAAGTCTCAGA 1333653 30 100.0 33 .............................. ACGGCTTTGACACGGTACTTGTATTTTCGCCAC 1333716 30 100.0 33 .............................. TCGTGTTGACTTCTTTGAGCTTCCTTTGGTACT 1333779 30 100.0 38 .............................. TCTTTTCTCCGGTCCATTTCAAACCGAGCCAGCCTAGA 1333847 30 100.0 40 .............................. ACGAGAGCCGGGATTGTTTCGCTAGTTCCTGATGCATCCA 1333917 30 100.0 35 .............................. TCCAATTAGCTAGAAACGCTATTCCCATCGCAGCA 1333982 30 100.0 35 .............................. TTGAACCATTCATTGAGCGCGTACTTGTTGCTAGC 1334047 30 100.0 39 .............................. CCCAGAACCTCTCCAACATCACCGAGTGCTGACCAGAAT 1334116 30 100.0 35 .............................. GAAAGAAACACGTGACCATCGAGCTGTTTGATGGC 1334181 30 100.0 34 .............................. TGCTCAAACGACAACAATACCGAGGAGAGGTCAA 1334245 30 100.0 37 .............................. ATCGACCCGACCACCTCCTTTCTCCACAGGCCCCCAG 1334312 30 100.0 36 .............................. GCACAAAGTATTCTCCGGAGATTCAGAAGCAGACGC 1334378 30 100.0 35 .............................. CGGGCTTGGCTATGAACAGCACTGTCTCAAGCGTC 1334443 30 100.0 33 .............................. ATCACAGCAGGGAGGACATTGTCCTTAGCCCAC 1334506 30 100.0 35 .............................. GCTTGAGAATCTTTTCGGCTGCACGAATCGAGAGA 1334571 30 100.0 37 .............................. CGTCGCTCGGGTCGGAGCTGACGAAGCTAATTTCACC 1334638 30 100.0 35 .............................. TCCCATACCAACCATTCAGGCATAGTCAAATTAAA 1334703 30 100.0 38 .............................. TCCGCTGGTAGACGTTCACCTTCGATGAAGATATACAA 1334771 30 100.0 39 .............................. ACATTGACTGCCCTGTTTGCTGAAACTTTCCAGCATCGC 1334840 30 100.0 36 .............................. TGAATCTGCCGCTTCGGTTATTTCACCGAGTATAAG 1334906 30 100.0 36 .............................. TTTCCCATTCTTGTTCCCTCCTTATGAAATTGTTCT 1334972 30 100.0 35 .............................. TCAGTAGTGTATCAACATCTGCAATTGTTACCAAC 1335037 30 100.0 38 .............................. CCAAAGTCTGGTTCAATCCTGCAAGCATCCAGTTTTCA 1335105 30 100.0 36 .............................. ATTCCTGCCAATTTCAACCCGTCTCTTCGCATTTCA 1335171 30 100.0 39 .............................. TACCTATCAATAATACCATCGCTTAAAATCGATTTTAAG 1335240 30 100.0 35 .............................. ATCGGAGGCGGCGCGGAGGCCGGTGCCGCTTTCTC 1335305 30 100.0 34 .............................. TGGCTGCGAATTGTCGCTCCCAGGACACGGTTAT 1335369 30 100.0 36 .............................. GCCTCTATTGCTGGCCGATATCCCCTTACGAAGCAA 1335435 30 100.0 35 .............................. TAGAGATTGATAATTATCTTTGTGATCTCCATAGG 1335500 30 100.0 33 .............................. TCAAGCCGCAGGTAATATGGTCGCCCGTGTCGG 1335563 30 100.0 35 .............................. ACACTTGGTCTTTCGTTTATAATACTGATGACATT 1335628 30 100.0 36 .............................. TTTTTCAAGTGGTGAGTATCTTAATCACGTAGTATG 1335694 30 100.0 34 .............................. GTCTTTTTCATTGCGGCTATTCCCAATTCTTCCC 1335758 30 100.0 32 .............................. TTGTATTGGCGCTTGATGTATTCCGTAATACG 1335820 30 100.0 35 .............................. ACTATTCTCTGAGCGACTCTTCGAGCGTCGTCTAT 1335885 30 100.0 34 .............................. TCCCGAACTAATGTGTGAACCCAGTAACGGTGTT 1335949 30 100.0 37 .............................. CCAACCTCCTTTTAGGTTTGTCAATCATTTGTTTTTT 1336016 30 100.0 36 .............................. GCTTCGATATCCACTCTTCCAACGCGTTCCCAAGGC 1336082 30 100.0 38 .............................. CTGTCAAAGACACGGATCTGGGGATAAACGACTCTCTC 1336150 30 100.0 34 .............................. ATACACAACTAACCTGAAAAACACCAGAAGTCAA 1336214 30 100.0 38 .............................. AGAGAAGCCGATATCTAATCTCCTCGACCAGGTTAGCT 1336282 30 100.0 38 .............................. TGAAAAAAATACAACCGTATACCTTTTCAAACGATCGA 1336350 30 100.0 38 .............................. TGGTATTTATTTAAGATGAGATGATGGACTCGGTGATC 1336418 30 100.0 36 .............................. ACGTGTTCTATAAACAATAGATTACTATAGATATAT 1336484 30 100.0 37 .............................. TTGATCGATACGCTAACATGTATCGGTCAGGAGACCC 1336551 30 100.0 36 .............................. ACGGGTGTTGCGTGATGGTCTCCTTGGCAGGTCTAA 1336617 30 100.0 35 .............................. GTGTTAACGAGCCAGCCTTACCACTAGCAGGAGGA 1336682 30 100.0 39 .............................. CCCCCGGGGACCTTGACCTCCAGCTCGAAGCGCCGCCCG 1336751 30 100.0 33 .............................. CTCAAGTCACAGGAATGGACCTGAACTCTGCAA 1336814 30 100.0 36 .............................. AGTGCCGAGTTCGTAGTATCAAGGTACTTCTGAGAG 1336880 30 100.0 35 .............................. GAATATGAGCGGTTCGGCAGGGGACTACCCGGCAA 1336945 30 100.0 39 .............................. ATATATCAAAATGATACAACTAATACTTGACAAAGTCGC 1337014 30 100.0 38 .............................. CTAGATCAAAATTCCATGCATCAGTTACCCCAGTTTCC 1337082 30 100.0 38 .............................. CATCCGTGGCTTTAGTAAGTTCTTCCCACGAAGCCTTG 1337150 30 100.0 37 .............................. AGAAACTCCAGGAGTACACTCCGGACGATATTATCTT 1337217 30 100.0 38 .............................. ACGGTGGGGACGTGATGGTCTCCTATCTACGGTCTAGT 1337285 30 100.0 39 .............................. AGATGATTCCCGAGTTGCTTACATCTATGCAGAATTTAG 1337354 30 100.0 39 .............................. ATGAAAAGTTCCGCTATTTTCGGCCTCCCGAGGGCGCGA 1337423 30 100.0 39 .............................. GTAGCATATCCGGCCTCTTTCAGTTCATCGAAGAAGATC 1337492 30 100.0 39 .............................. ATAGCTTCTCCGTTTCTGAGCTGCTCCTGAGTCAGTTCT 1337561 30 100.0 36 .............................. GTTCCGCGCCCGCGATTGACTTTATTTTGAATAAAC 1337627 30 100.0 35 .............................. TACGAAGTGCCTTCGCGGTTGACCCGCCAGGCTAT 1337692 30 100.0 38 .............................. CTGCAAGTTTCTGAGCCTTGATTTGAGCCTGTTCTACC 1337760 30 100.0 34 .............................. CACATTATCGAACCACGAAGATTTTGACGCCTCG 1337824 30 100.0 38 .............................. GGATGTCGCCATTGGATAAGCGGATAAACTTCCGCACC 1337892 30 100.0 38 .............................. GCCAGCCAATTTTCAAATATTGCCTAATCTTGTTTTTC 1337960 30 100.0 34 .............................. TCAGGAACACAACAAAGATACCGATAAGCATAGG 1338024 30 100.0 34 .............................. TTCGTTGGTACTCCGCCTGTCTTGCAGCTTCGCC 1338088 30 100.0 36 .............................. TCAAAGAACACACAATACACGCAACTACCACACTAC 1338154 30 100.0 39 .............................. CGCTTTGACTGGTGTACTTTGGCAATTTCTGGAGATTTG 1338223 30 100.0 35 .............................. CGCAGCATACGCAGTGCTAGGGGTGTAGAACTATG 1338288 30 100.0 34 .............................. CCCCATCCAGTTTCGAGAGCAGCCTGAACCAAAA 1338352 30 100.0 38 .............................. TTGGATGAAGCTCACGTGTGGTTTTTCTCAAGACAATG 1338420 30 100.0 39 .............................. AGAAACTCCAGGAGTACACTCCGGACGATATTATCTTTC 1338489 30 100.0 36 .............................. TTTGATCAAATACAATCGAAGAATCCATATTATAGA 1338555 30 100.0 34 .............................. TGTAACTTAAGACAAGCCCATGTATCAGAATCAA 1338619 30 100.0 37 .............................. ACGGCGGGAGCGGCTCGTTCAACATTAACACTGTCCC 1338686 30 100.0 36 .............................. CAGAGCTCATCAAGTGACTGAATTCTAATATAGCAT 1338752 30 100.0 33 .............................. GTTTGTCGTTCATGGTTTCACCTCCAGAATTTT 1338815 30 100.0 34 .............................. CAGGGCTTAAATACATTCAGGCCGGGCCGGACGA 1338879 30 100.0 35 .............................. CAACGATGAAGACGTTGTTCAGGGCGATCGCGTCG 1338944 30 100.0 38 .............................. TCTGTATCTTCACTTCTTTTAACTCTGAACCTTTTTTC 1339012 30 100.0 35 .............................. TTTGAGTCATCATCTCTAAAAGCAAACATATTGCC 1339077 30 100.0 34 .............................. TCTTCACGTGGCCGGGATCGGATTCGATGGATTC 1339141 30 100.0 39 .............................. TCCTCGCCTCTATCTGCCTTCTGAAGTCCAGCCCCGCAG 1339210 30 100.0 35 .............................. CTGGGGCTGCCGAGTACACTGCCTTTCACGACGCC 1339275 30 100.0 35 .............................. TCGAAGTGTTGAGAAATGAAGAATACGACATTGTT 1339340 30 100.0 34 .............................. ATTGACTTCGGGCAAGGGCTTGATACTACAAGCC 1339404 30 100.0 36 .............................. TCGTCAAAACCAAGATTGAATGTGTCGCACATTGCG 1339470 30 100.0 38 .............................. CCCACTCGCCATCAAACTCGGTAGTCGTAGCCTCCACA 1339538 30 100.0 35 .............................. TGATAATTGGGTCGACCACCCACGAATAGGCCCAC 1339603 30 100.0 34 .............................. AGCCTAGGCTTGGCTATTCCGCGTTCGTATTTGC 1339667 30 100.0 38 .............................. TATTCAGACGGTGGAGGAAGAGACACCTCCGGAAGAAC 1339735 30 100.0 39 .............................. ATCTCCATCATGGAGGCTGAAGAAGCGAGAAGAATCATG 1339804 30 100.0 38 .............................. CCCCATCCAGTTTCGAGAGCAGCCTGAACCAAAAGCGA 1339872 30 100.0 37 .............................. GATCCTTCTTCCAGCCGTTGTTCAGATCATGAAAACC 1339939 30 100.0 36 .............................. TGCGGACGGTTCGATTCCGTCCCTTGCCACCAGAGT 1340005 30 100.0 32 .............................. CTTTCTAATTTCATGCTGTCTGCTACTCTTTC 1340067 30 100.0 36 .............................. TTTCGACGCCGCAAAGAAGGCAAGGGAGCTGGTAGA 1340133 30 100.0 35 .............................. AGCACAAACCGCTAACAAACGGCCTTGAATATGCC 1340198 30 100.0 40 .............................. CCAAAGTCTGGTTCAATCCTGCAAGCATCCAGTTTTCAGA 1340268 30 100.0 33 .............................. TTTCAGAAATTCACTAAGTTCTTTTTCTGACGC 1340331 30 100.0 37 .............................. ATTCTCGAAGGCTCAGGACGGACACAGAGGATTATAT 1340398 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 132 30 100.0 36 GCTTCCAGACTACCTATGAGGAATTGAAAC # Left flank : GAGTAGGGATTGATGAATCGAAAGGCTGCGCTCGAGTTGCTGAAATTGATCTCGATGGATATGATATTGAACTCGACGGTGAATTTCCTATGATAAAACTCTCAGCCTCTCGTTCTGTAATCTCCCATGTACTCGCGGACAATCAAATAGATAACTTTGCATCAAGTGGCAACATAGAACCTCTGATTGGACTTGAGACAACTAAAGAAGAAAGATTCGGAGCAGAAATCTCAGCAGCACAAATATGCTGGACACCTGGAACTAAATTCAGTAAAGATCATACTTTTCTGATAGGCGAAAAGGGAATCTGGAAATCCAAATCATAATTTACTCCTCCGTCGACCCCTGATGCATGGAAAACACCGGGGGATCGACAGAAGTACTTGAATTCAATTCTTTTACTGTGGATAAGATTTACAAGAAATCGGTCTTTGAAAAACAGGCATGAACTGAATTTGCCTCAAAACACTGAAAATACTTTATAATCTATATAGTAACGG # Right flank : CTCCATTACGCACACAAACCAGAACGCGGTGTAAAAGGTAAATTGAAAGTAGACCACTTAGAAGAAGAACATGATTCTGAGTCAAGCTCAGAATGATTGGAAGGGAGGAAAGACCGGGATACCGAACACCGATCTGGCATCTCCGCTCATTCGAAATGGTAAGAACGAGATCCCGTATAGGATCATTACGGGATGACAGTATTGGTGTACTGCGGGATGACAGCCCCTTCCCGTCATGCCGGACCTGATCCGGCATCTCCGCTCTTTCCTCTGTCTTGAACCAGGAACGAGGAACCCGGACTCGCAGCGTCGGAACGAGAAACTGCTCTTCCAAGGACGGGTCCATGATCTGGGACGAACAACGAAGGACGGCTCTTCTGAGCGAGAACCATAGTGGGATGATAGGAGCGGTTGTTGGTTGTTCGTTGTTGGTTCCTGGTAAGAACGAGATCCCGTATAGGAGCATTACGGGATGACAGTACGGGGACACCACGGGACGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 3 1431485-1433565 **** Predicted by CRISPRDetect 2.4 *** >NZ_LS974202.1 Mesotoga infera isolate MESINF1 chromosome MESINF, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1431485 30 100.0 35 .............................. ATTGTGTTCAGGTATTTCGGGAAGTTGTAGGCTGC 1431550 30 100.0 37 .............................. TCGGTATGGATATAGTGGTTCCATATCTGTTGTCCGC 1431617 30 100.0 37 .............................. ATTATAAGACCCAGTGCAACACCTACTGCCGTGCCGA 1431684 30 100.0 38 .............................. TAATTGCCCTTCATCTGTACTTCTCATCGTGCCATCTC 1431752 30 100.0 37 .............................. TGAAGTATTGTGCTTGCCTGTTGCCCAGTTGCCTCGA 1431819 30 100.0 37 .............................. AGTGCAAGGTTACGGACATTGAGAGGGCTTGGGGCGA 1431886 30 100.0 37 .............................. AGACAATAAACTCATCTGATAATTCTTTCTCTGCCTT 1431953 30 100.0 36 .............................. TAAGTTAAAACTTAAATATTTTAAGTTTTTATATAA 1432019 30 100.0 36 .............................. TTATAAATGGGGATAATGTCTAACGTGTCAGAATTG 1432085 30 100.0 35 .............................. TAAATGTTAACCCCTATCTGGGCTAGAGCAGTCTC 1432150 30 100.0 33 .............................. ATTACAATTGACCCTTAGAGCAAATTAGTACGA 1432213 30 100.0 36 .............................. GGATACTCCTTTTTTAAGAGGTCAACATCTACTCTA 1432279 30 100.0 37 .............................. TTGTATGTGCCGCCGTACTTATCCCCGTCGAACACGG 1432346 30 100.0 35 .............................. GAACCACCAGAAACAAACGGATTTGCAAGCACAGG 1432411 30 96.7 37 .............................T ATGTATGCTCCGAGCCACTTTGTGTTCTTGAATTCGA 1432478 30 96.7 37 .............................T AGTTTTGGAGTTATAGAATCTCTCCATGATTTTATAT 1432545 30 96.7 37 .............................T TAGATACCGCACTGGCTAGTGGATTCGTTTGTTAGCA 1432612 30 100.0 34 .............................. GCAAGAGTCCTCAACACGTACCTCCTATTCAGTG 1432676 30 100.0 34 .............................. CCGAGCCTGAAAGGCGAGATAATTCTCAATTCAT 1432740 30 100.0 36 .............................. GCGAAAGAACCGCGCAACGCATCGTAAACACGCTTA 1432806 30 100.0 36 .............................. CCATTATAAATGGGGATAATAGCCAAGGTATCATGA 1432872 30 100.0 37 .............................. ATAGACTTTATTATGAAAGCTTCTTTCCCGTCCGATA 1432939 30 100.0 37 .............................. GTTATTGAACTTAACATCAATCGGGGGCAATTCTTCC 1433006 30 100.0 37 .............................. GTCCCTTCCAGTTCCAGTACAACCAGCCATAGGTTAC 1433073 30 100.0 38 .............................. TTGGCTGGAAGTCTTCAATTTCGCACGCTGAGTTCCTA 1433141 30 100.0 36 .............................. TTGAACTTTCTGCTCCAGTGATCGGTTGTTGGTATG 1433207 30 100.0 36 .............................. TTTTCGTCTTCAAGTTTTATTTTTGCCCATATATTG 1433273 30 100.0 35 .............................. GGCATTTCCAAGAATCTTTCACCAGCAAGACTCTT 1433338 30 100.0 37 .............................. CCGCTCAAGAGCCGCCTTGTCACTTCACGGGCTGAAA 1433405 30 100.0 36 .............................. AAGTTCTCCCACGGCTCACCTGCGAGGAGCCTTCTT 1433471 30 100.0 35 .............................. GCGCCTGCTCGGAGCTGCCAATAACCAAAGCTCCG 1433536 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 32 30 99.7 36 GTTGAGCGAGAACCATAGTGGGATGGAAAC # Left flank : GCTCCCGAGATTCTCGATTCTCTTTCCTCTCCTCTTCATGACAGTCTCGTCCAGAATGATGTACTTGAACTCGAGAAAATTCTCCTGGAGGAATCTAGAGATGTAATCTACTCTCGCGTATGAAAGGTCTCTTGTGGAGAGTGACTGAGAGCTCAACATTCTCGAGATGGATGACTGAGAAGAAGAACAGAAGGGGGCCAGTCTGCTGGTGTTCTTATGAGCGGACAGGAAGAGGGCACAGGAATACCCTTCAACAAACCTTCTCTGCTCTATACGTAGGAAGCGAACTGAACCGATGACATCCGAGATAATCTGTGATATATTCGTTGTGGGCATGAAATCATCCTTTCGTAAGGTTTCGTCACCACGAATATACGATGATTTCATGCCTTTTTCAATGACCCTGTCCTATTTCCTTCTTTTGGTTAAGTCAAAATGCATAAGTTGAGATAGTGGGATGGAAACGCGTTCTTTTCAATGAGGTACATAAGCAGAATAGA # Right flank : CATTTTTGTGCCGCGCTGAGTTTTACTTCAAGCTATCCGTTGAGCGAGAACCATAGTCTCAACTTATGCACTTCGAGTTAACAAAGCGAGGAAGAAGGAAGTGGATAGAAGAATCGCTAGCGGAAGAGCTTCGAGCTAATTGGAAGAAGTAATCGAATTTGATCAGTTCAAGGAAATCCCTGAGAGAGACCTGGTCTTTGACAGAACGATAGAAGTTGGCGATCATCCATGTAGTGAAGGCAAGCTGGACAAGTTCGACATGCTTCTGAAAACTGGTAGAGGAGAAGACCTGGGCCTTGAGACCGAAGTTCTGCTTGACTGCTTTGAAGTAGGTCTCGATGTAGTTTCTCTTCCTATAATGCTCAAGGATCTCCCAATCGGTCAGAGAAGTATCGCTTGAGAGGATGATTCTGTTCTCTTGGTCTGTGTTATGGAAGACAAGCTTGACAGTGGCATTGTTGTATTTGGGTATCTTCACAATGATAGAAGAGAGACCGCGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAGCGAGAACCATAGTGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //