Array 1 13223-15195 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADGLX010000058.1 Micrococcus aloeverae strain 19428wE3_DK2 NODE_58_length_15305_cov_67.7471, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 13223 36 100.0 34 .................................... TCCGTGGCGGGACCATGTATGCGATCTGGCGGAC 13293 36 100.0 37 .................................... GCGGCCCACCACGACGCCCTCTACCGTGGCACCCTGA 13366 36 100.0 35 .................................... CGGGGCCGTTCCGTGCTGGGCATCGACCCCGGGTT 13437 36 100.0 35 .................................... GACACAACCCCGCCCGAGGAGACTGCAACCCGCGC 13508 36 100.0 38 .................................... AACAGCTCATCGGTGGCCACGGCGTGCGCGCGGGCCTG 13582 36 100.0 37 .................................... GGTCACGGCAAGGATTTCGCGCGGGGCATCGCGTCCA 13655 36 100.0 35 .................................... CGGATCGCGTCCCCGAGGTCCCGGATGGACTCGCC 13726 36 100.0 36 .................................... TTGCCGATGACCTGGCTGGACACGTCGAGGCCGTCC 13798 36 100.0 35 .................................... GAGCCCGGAGACGTGACGGTGGCGAGGTCGCGGGT 13869 36 100.0 36 .................................... ATGAAGGCCACGGTGCCGCTCATGGTGTCCAACGCG 13941 36 100.0 35 .................................... GGGCACACCGCCGTGGTCATCGGCAACCCGTCCGG 14012 36 100.0 34 .................................... CAGTCAATCCGCAACCACCAGAAGAAGCACATGC 14082 36 100.0 35 .................................... GCACCGGACGCGGTGGTGACCGAGCTCCGGGCCTG 14153 36 100.0 39 .................................... TGAACATCGGTGAGGCGGGGGGTGGTGTGTCCGGCACGT 14228 36 100.0 35 .................................... GTCACCAGCATCGCCCCGGGTCCCCAGCCGCGCGC 14299 36 100.0 34 .................................... CGTCAGCAGCCGTCCGGTGAGCTGGCGCAGGTCA 14369 36 100.0 34 .................................... CTGGCCGTCGCCAACGACCCGGACGAGGCCCTCC 14439 36 100.0 34 .................................... CAGGGCATCAACCGTGTACTCGCCCCCATGTGGG 14509 36 100.0 35 .................................... GGCGACTGGGAGACGAGCGGCAACCGCAACCCTGA 14580 36 100.0 34 .................................... CCGGCGCAGTGGTGGTCCGTGCAGGACTACCTCG 14650 36 100.0 37 .................................... GTCGACGGGCGCTTCATGTACGCCGCCGTCTGCTCCG 14723 36 100.0 34 .................................... TGCGTGTAGGAGCCGCCCAGGTGGCCGGCCAGAA 14793 36 100.0 38 .................................... ATTCCGCGCCAGCACTGAGATCGGAGGGGGCCCCCATG 14867 36 100.0 40 .................................... GGTGCGCAGTGCGTGGACCCTGCCCTGCATTATGGTGCGA 14943 36 100.0 37 .................................... GTCGACGGGCGCTTCATGTACGCCGCCGTCTGCTCCG 15016 36 100.0 34 .................................... TGCGTGTAGGAGCCGCCCAGGTGGCCGGCCAGAA 15086 36 100.0 38 .................................... ATTCCGCGCCAGCACTGAGATCGGAGGGGGCCCCCATG 15160 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 28 36 100.0 36 GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : GTTGAGTGCCCGGGATCGTCTCCGGAGGAGGCTCATCGCCTATGACATTCCTGACGACCGCCGCAGATCCCGGGCGGCCCGCGTCCTCGAAGGGTTCGGAGATCGAGTCCAATATTCAGTCTTCGTGGTGGATGCCTTGCCCGCCCAGTTCGTCTCCCTGCAAGCAGCCCTCGAAGCGGTGCTGGATCCGGGCGAGGACAGCGTGCTGGTCTGCGACCTCGGCCTGACGGCCACGCTTGGCGCAGAGCAGTTCAGCTTTCTGGGTCGATCACGCGAGATCTCTGTGGATGGGCCCATCATCATCTGAAGCGAGCCAGGGACCTTCGCGAAGGCTCCGTCGATGTCCGGAATCCGGCGAGCCGTCGCATCAGAAAAGGGCTTGTCAGCCCACGGTTCATGGGTCGAGGCCGATAAGCATGGCGCTCCACGGACGCCTCTTGAGCCCAGGGCTCGCCGACGGTCGCGTCTGCCCATGTCAAAGGGCTGTAATCTGAGGTGCT # Right flank : GGTGCGCAGTGCGTGGACCCTGCCCTGCATTATGGTGCGAGTCTCCGCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 144-611 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADGLX010000186.1 Micrococcus aloeverae strain 19428wE3_DK2 NODE_186_length_626_cov_61.3527, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 144 36 100.0 37 .................................... CGACCCGGGCACACCCCACCGACGCGGGCCTCGACCT 217 36 100.0 35 .................................... ACGAGGGGGGCGGCGGTCGCGCCGAGACCCTTGAT 288 36 100.0 35 .................................... CTGACGTCCACGATGACGTGGAAGCCGGGCACCCC 359 36 97.2 34 ........................G........... GGGATGGGGCCGGTCATCGCGGCCCGCCGCTTGC 429 36 94.4 35 ............C................G...... CGGGCGGCAGGCGTGGAATGGATCAACCGCAACCA 500 36 100.0 40 .................................... TCGCACCATAATGCAGGGCAGGGTCCACGCACTGCGCACC 576 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 7 36 98.8 36 GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Left flank : TGCCGCCTCACCCCCGTCGAGGACACCGGAAGCGAGGTGGGCACCGACACCGACACTGCCCTCGAGCTCAGCGCCTGACAACCCCAACGAAGGATCCAACCGCTACACCACCACAAGGGGCTTGACCGGGACGGCCCGCCCGGG # Right flank : CATGGGGGCCCCCTC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [31.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 2894-2621 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADGLX010000152.1 Micrococcus aloeverae strain 19428wE3_DK2 NODE_152_length_3105_cov_25.5228, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2893 29 100.0 32 ............................. TACGTCAGCCAGATCATGCAGCTCGCCCAAGC 2832 29 96.6 32 .........A................... TTGCACCCCTCCCCCGTTAGAGGGTGGAACAG 2771 29 100.0 31 ............................. ACGAACGTGTTGCGCTCGCCCTCGTGGACCT 2711 29 89.7 32 ..GC......T.................. CAGATGGCGGCCTTGAATCGGATCGAATACCG A [2706] 2649 29 86.2 0 ......T....C.G..............A | ========== ====== ====== ====== ============================= ================================ ================== 5 29 94.5 32 GGAAGCCCCGCGCACGCAGGGATGAGCCC # Left flank : CAACAATCGAAGGCTCCACTCGTCCCTGGCTATGACCACCCCGGCCGAGTACGAGACTGCCTACTACGCCGCCCTCAACCGAGAGCTGGCACCCACATAGGAGCGGCACGAAACCCGGGACGCTTCATCCTGCCGGGCGGGGCCCGCTCGTCTCATCTCAGCCCGGGCCTCGTGCCAAGAACCTCATGACCCACAACACCTAGCCAGGTAG # Right flank : GACTCCCAGGGGCATTCACGGCTCCTGGGTTGAGCTGTCGTAGGGATCTGGGCTGGTCCCCGGTTCTTCCTAGACGCCAGCCAGTGCTCGTGACAGCTGCGGGTGTCGTGGAGGTGCTGCGGGGACGTGTCGCGGTGTCCGCGGGATGCTCAGCTGGTGGGCTCGGGGACGGTGGCCTCGCACTGGACCATGGGCATGCCCTTGGGGTCGCCGGTCTGGGCGTCCAGGGGGGCGGTGGTGCCGTCGGCGATGATCTCGCAGTGCAGGTCGCCGGCGGCGGGCAGCTGCGGGACGTTGGCGATCACCTGGATCTTTTCACCGGGCTTGGCCTGGGTGCGCAGGGTCAGGGGGGTGGTGCCGGCGGGCTCGGCGGGGATGGTCTCTTTGGTGTGGGTGTCCGCGCCGGTGCCGCCCACGAAGAGGTTCACGCCGCCGCGGGCTGCCGTGGTGGTGGTGCCGTCGCGGGGGATCCACTGGATGCGGATCTGCACGTCCACGGG # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAGCCCCGCGCACGCAGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //