Array 1 668627-668776 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSSK010000003.1 Streptomyces olivaceus strain CR8 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 668627 28 100.0 33 ............................ GTAGAAGCCGGGGTCGTGGACGCGGAGGACGGG 668688 28 100.0 33 ............................ GCCGTCCCCGTCGCTGTCGCCCTCGACCTCCAC 668749 28 82.1 0 ......................GACTG. | ========== ====== ====== ====== ============================ ================================= ================== 3 28 94.0 34 GTCCGCTCCGCGCAGGCGGAGGTGAACC # Left flank : ACATCCAAACCCTCCTCGACCCCAACAGCCCACCACCCGGCCCCGAGGAAACCCCCGACGAACAACTCATCGACCTCTGGGACCCCGTCACCGGCCCCATCCCCGGCGGCACCAACCACGCTCCCGACCAAACCGCCTGACACACGAGAGGAGCTTCCACCCCCGTGCCTTCCATGACCGTCATCTCCGCCACCGCCATCCCCGACCACCTACGCGGGGCCCTCACCCGCTGGCTCCTCGAAGTAACCCCCACCCTGTACATCGGCACCATCTCCGCCCGCGTTCGCACCGAACTCTGGACCAACCTCACCGCCTGCCTCACCGAAGGAAGCGCCGCCCTGGCCTACCCCGCAGCCAACGAACAAGGCTTCACCCTCCACACAGCCGGCCCCCAACGCCGCCACCCCTTCGACTTCGACGGCCTCACTCTCATCGCCTTCCAACGCCTCCCCGTAGGTCAAGAAAAAGCAAAGCCCCTATAGAGCCGCAGGTCACGAAGT # Right flank : CTCCAGTATGGGCACGAAAGCAGGGATGGACCCTCGTGACGACACCGGCGACCAAGATCCGGACCATATGCGGGCCAGCGTCGGTCCGATCTTCTCTGTAGCCGCCATTCGTGCTGGTCAACGGCTTACATCGCCTGTACCACCACCAGACAAAAGCCTGCTGGTAGCACTCAGCCACCTTTTGCGGCCTTCTTCGAGAAGCACCCTGCGGCAAACGGGCAGCCTTGTCGTCTCCCTACAAGTCACGCGGAGAAGGCCTCGCACCTCGGCCCAGGCGAGACCGTACCCAGTCCCAAAGTCAGCATCAGTCCGGCCCACACTGAACCTGCAAACACGACCGGACTCGACGGAGCTGCGAAGAGAGCATCTTGCAACAGCTGACTACGTCTCAGCAAACGTCCTGCCAAAGCCACCCGCAGACAGCCACACCGTAAAATCGTTCGCCGCCCGAAACCACTCCCGGCATCCGCATTGCCGCACTCCCTCCAGCGATCCAAGAG # Questionable array : NO Score: 5.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCGCAGGCGGAGGTGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCTCCGCGCAGGCGGAGGTGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.80,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 375523-375251 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSSK010000002.1 Streptomyces olivaceus strain CR8 Scaffold1_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 375522 28 100.0 33 ............................ CGAGCCCCGCGCGCTCCGCGGCTTCGACCTCGT 375461 28 100.0 33 ............................ CTACACGCCCGACCCGCCGTGGACCGAGGCGTA 375400 28 100.0 33 ............................ CAGGTCCTGGATGGCGACCTGCGCGACGTCCGA 375339 28 92.9 33 .............T....T......... GGAGCTGTGCGGCCGGTGCTCCGTACGCCGCGC 375278 28 82.1 0 .......A.............ACG..C. | ========== ====== ====== ====== ============================ ================================= ================== 5 28 95.0 33 GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Left flank : GGCAGCGACCTGCCGGACGAGGACCTCGGCGCCCTCTGGGACGACGGCGACACCGTCGTCAGCGGCGGCCGCAACTGGAGCGCCACACACCACCTCGACATCATCCCCGAACCCACCTCCGCAGAGGCGGCCCCGTGAGCGCCGGAACGACCGTGGTCGTACTCATCGCGGCCCCACCCGGCCTCCGCGGACACCTCACCCGCTGGTTCGTCGAGGTGGCCGCCGGCGTCTACGTCGGCAACCCCAACCCCCGCATCCGCGACCGTCTGTGGACCGTCCTCGCCGAACGCATCCACGACGGCCAAGCAGTCATGATCGAACCGACGGCCACGGAACAGGGCTGGTCGGCTCGCACCGCCGGCCGTGACCGCTGGACCCCCGTCGACTTCGACGGCCTGACCCTCATGGCCCGCCCACGCCAGAACGGACAACCCTGGCGGCCCACGAACGAGGTAAAGCAAAACGGCATGATCACCTGACAAAACCACAGCTCAAGAAGT # Right flank : CTTGCAGAGCTTGGTGCGGGCGGTGGAAGCGAGGCGGTCTTCTTCTCCAGGCGGATCGGAAACCGCGGAGCGCCGCCGTGGCCGTCATGATGACGATATAGGGCTCGGTTCGGTGGGAAGCCAACGTCAAGGCGGAGAGGCGGGCACAGCGCGAGCGCCAGCGGTGTCCACGCGACTGGCCATGTGCTCGCCGATCGCCGCCGTCCGCGTCACCTCATCAATCGCACTGGACTAGCGTCCACCGTCATGTCGTCCCCAAGCGCTCAGCTGCGTCTGACGGGCCCACGGGCCACGTCGGCGGGCTTGTCGAAGCCCCAGCCTTGGGCGTTGCCCCTGCGAGGCGGCAGCTTCCGGTGGTGAGGGGCTCTCTTCTCATCGAACTTCTGTGCCTTGTAGGTTCGCGTGTGCGTAATGAGTTGTAGCTGATGCGCACGGGCTGACGGGGGATGAGCGATGGTGGGGCACCGGCCGACAGATTGGCATGTCCTGGACCTGGACAA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 386009-387806 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSSK010000002.1 Streptomyces olivaceus strain CR8 Scaffold1_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 386009 28 100.0 33 ............................ GGCGTCGCTCCAGACCGCCACCGTGTGGACCTG 386070 28 100.0 33 ............................ GATGAACCACCGGCTGATCACGCTCAGGCTGAT 386131 28 100.0 33 ............................ CTGGTTGAACGCACCCGGGGAGTCGCCATGACA 386192 28 100.0 33 ............................ CCTGCACGTGATGGCCGACCGGGAGAGCCGCGA 386253 28 100.0 33 ............................ GTTGGGGCTTGACGCCAAGACGTCCATGGGGCT 386314 28 100.0 33 ............................ TGCCTCCGGCGAGGCCGTGTGGGTGGACGTGAT 386375 28 100.0 33 ............................ GCGCAGCGAGACCTTCCGGAACGTCGTGCAGAC 386436 28 100.0 33 ............................ GCTCTATGGCGCCGCCCTGGTCGTCATCCCGCT 386497 28 100.0 33 ............................ TCCAGCCCGCCACCGGTTCGCGCCGGTCGGTGA 386558 28 100.0 33 ............................ CGCCGCACTCGCCGGCACGATGGTCATCGGAGG 386619 28 100.0 33 ............................ GTCTCCGCCGGGGCTGGTCTCGAATGCCTCGTC 386680 28 100.0 33 ............................ GGGCCCGCAGGGTGCGCCGCTCCGTACCGGCAG 386741 28 100.0 33 ............................ CGCCTCGACGCGGAACCTCCGGGCGTACGCGCG 386802 28 96.4 33 ..............T............. CACCTTCGACGCGAGCGGCATCCTGTCCGGGCT 386863 28 100.0 33 ............................ CTCCGTCATCAGGTCGTTGATGCGCGTCGTCAT 386924 28 100.0 33 ............................ CCCGGGCCATCTGCGTTGACTGTGGCCGGGACT 386985 28 100.0 33 ............................ GTCATCGAGCATCCGGCCCACGGTGCCCATCCC 387046 28 100.0 33 ............................ CCTTGAGGGCGCCGCTGCCAGTGCGCTCATGCG 387107 28 100.0 33 ............................ TTGACGTCGTGACCTGGGGTCATGACGGGCGCT 387168 28 100.0 33 ............................ CATCCGTTCGGGCGACATCCTCACCATCGACGG 387229 28 100.0 33 ............................ CACGACCGCGATGGGGAGCATGTCGTGGCGCTT 387290 28 100.0 33 ............................ GCAGCATGCCCAGCTCGCCACGCTGGTCGAACT 387351 28 100.0 33 ............................ CGCCTGCATCGTCAGGGTGTTCCAGCCGATGTA 387412 28 100.0 27 ............................ GTGCCCGCCCTCGGGCGTGGCGCCGAC 387467 28 100.0 33 ............................ CCGTCCACGGTTGGCGGTGTTGGCAGCTTCCGT 387528 28 100.0 34 ............................ GGCTTGCACCAGCTGCATCGGGGTGTTCGGCGTG 387590 28 100.0 33 ............................ GGGCAGCACCCTGACGCTGCCGCTGACCGAAGC 387651 28 100.0 33 ............................ CGCGACGTCCACCTCGGTCGTCGGCTCTCCCTC 387712 28 100.0 33 ............................ CGAGGACCCCCTATACCTGCGGGCCATCACCCC ACCGC [387723] 387778 28 75.0 0 ...........C.........ACGACC. | G [387789] ========== ====== ====== ====== ============================ ================================== ================== 30 28 99.0 33 GTCGTCCCCGCACCCGCGGGGGTAGTTC # Left flank : CCCAATGCGCCCCAACGGCAGACCCGTCGCCAGCACCGGAGCGGCCTCGGCCGCGTCCATGGCCTGAAACGCCGGGCATGCCTTGCCGCAGTCGTGGATGCCACACACCCACATGAACCAGAGCCGCCCCCGGCCGCCGCTGACCTCGTCCAACCGCCGCCGGAACGCGGGCGCCACGTACCGGTCCCACATGACGCCGGCCACGGCAGCGGTGTCCAGCAGGTGCCCCAGCAGAAGATGGGTGCGACCGTCATTGCGTGCGGCAGACTTCCCCCACAACCGCGACACCCGCTGGACGACCTCGTCGTCCAACCCCATCGCCCGCATCAACGCAACGACCGACCGCTCGTCCTCCACGCCCCGCTCCCTCCCCTGAAACCGAGCCGCATGCGACTAGTTGTGAAGGAACCGTAAACGGTGCCACTGACAATGCCCTCCCGGGCCAAAACGAAGTGAAGGAAAACAGGTACCCTCCCTCACATCACCGCAGCTCACGAAGT # Right flank : CCTCTCCCCCGTGCTGCGTCTCACATACCTGTCGCTCGACACGGAAGTTACCGCGGCAGGGCCCCGCCCCTGGCGCGGACGCCGGTCCACTCGCACCACACCACCTTGCCCGGTGACCGTTCCGCCACTCCCCACTTGTCGGCCAGCTCCGACACCAGCAGCAGTCCGCGACCGCTCTCATCCGACCGGTCTGGGGCCTGGGGTACGGCCGGTACCCCGTCCCCGCTGTCGTGGACCTCGACGCGCACACCGTACCCGCAGGGCAGCAGCCGCAGCAGGAAGCCCCTGCCGGGCGGTGCGCCGTGCACCAGGGCGTTGGTCGCCAGTTCGCTCACGCACAGCGCCACGTCGTCCGCGCGCTCACACACACCCCAGTCGGCGAGCACCTCGTGCGCGAACGCCCGCGCAGCTGGGACGGACCGGCGCTCTCGGCGGTAGAAACGCTCACGTGAGGAGAGGGGTGGAGTTTCTTTGTTCACGTGACGAGAGTCACGCTCCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //