Array 1 28746-28118 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LVDV01000027.1 Shewanella algae strain CLS2 scaffold00027, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     28745	    28	 100.0	    32	............................	TCATGGCGGCATCTCCAGAACTTCTAGAGCAA	
     28685	    28	 100.0	    32	............................	AAGGTGATAGACGATCCTCACATTGAACTAAA	
     28625	    28	 100.0	    32	............................	TTAACTTTGTTTAAAAACATGACGGTACTCAT	
     28565	    28	 100.0	    32	............................	TTATGATTATTGTTGACAGTGTAGCAATATGC	
     28505	    28	 100.0	    32	............................	TCCTATCGATATTGGTGATGCCGTTTTCTATG	
     28445	    28	 100.0	    32	............................	GCAGCAAGGCGAGGCCGGTTATCAACCGGAGC	
     28385	    28	 100.0	    32	............................	TATTGGGTACCTAGCTGCTGATGGTCTTTGCT	
     28325	    28	 100.0	    32	............................	GTAACGCTTAAATACTTCGGTAACTGCAAGCT	
     28265	    28	 100.0	    32	............................	AACTCCCTGTTTTCCATTGACGTTATTCTTCG	
     28205	    28	 100.0	    32	............................	AGAGCAGAAGCCGGAAAATTCCGGCGGCAAAA	
     28145	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
        11	    28	 100.0	    32	GTTCACTGCCGCCCAGGCAGCTTAGAAA	                                	       

# Left flank :   CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCTGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTCAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTAGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT
# Right flank :  GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAATATCCGAATTTCCTGCATTTATGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGACAGTTGGAAGCGTCCTGCTCTGGGCGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTACCTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGGGAGCGGATAAGCGGGGCAGTGTAGCTAACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCCCAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.51   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//