Array 1 7107-6099 **** Predicted by CRISPRDetect 2.4 *** >NZ_AODM01000030.1 Listeria fleischmannii FSL S10-1203 c27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 7106 30 100.0 34 .............................. TTTTAGATGATGAAGAAATGATAAAACGCTATTT 7042 30 100.0 34 .............................. TCTTTAATTTCAAATAGTTTCTTTTCGCAAATGA 6978 30 100.0 34 .............................. TTTTGTAGCGTAATCAATAAATAGAATGCTATCA 6914 30 100.0 36 .............................. AAATTTTCACGAATCCAATTATGCGATTTAATCCCT 6848 30 100.0 34 .............................. TCAGGTCAAGGGCATGGCTATTTTTAGCTGAAGC 6784 30 100.0 35 .............................. TCCAATACCGTAGTGTCTTCGTTTTTGAGAAACAC 6719 30 100.0 37 .............................. AAAACATCTTCTGCTTTCCTACCAAGGATAAAACATA 6652 30 100.0 34 .............................. ATTGCGTTCACGGCGGCTAAGGAATTCCGTTTCA 6588 30 100.0 36 .............................. CAACAACAAGGCGATGTTCAATTTAAAGAAATCATT 6522 30 100.0 36 .............................. GAAGTATTATTCGTAAGTAGTTGATTGGGTTTATTA 6456 30 100.0 35 .............................. TCTTGTCCACAAAAAGGATACTGACAAGCAGTAAG 6391 30 100.0 36 .............................. TACTTTTTCGTCTTTAGGATAATAGCCACTTGCGGC 6325 30 100.0 35 .............................. GAAGTAAATTTGGCTGGGTTTAATGATACTCCACG 6260 30 100.0 36 .............................. TTTGAAAAAACAAGCTGTAGGATGCTATTATGAATC 6194 30 100.0 36 .............................. GCCGTCAACAGGCTCACGATTTTATTTTGTTTCATG 6128 30 93.3 0 ...........C.....A............ | ========== ====== ====== ====== ============================== ===================================== ================== 16 30 99.6 35 GTTTTAATCTATGTATTGTGAAATGTAAAT # Left flank : ACAAGCTGTTGTATGTTTATAAAAGTTTTGTGAAAGTTACTGGAAAGAAAGACAACAAGGGACGTATACCGGTACAGGTGAAGCCAAAAAGTCAATTGATTATACCCGTATGGAACAATTCGGAATTACGAGGCGGGAAAATTAAATGGTATCATGTTGGGCAGGTATTATCTTGGTATGATCACGGAAAAGGATATTTAGAATTGTGGTACCCAGCTAGTGGATGGTATTATGCAGCGCAATATACACTGAAATAAAAATTTATTCCAAAATTTATTGTAGTATCTTAAAAAGAGGAAAAATTACTATCTGTCGACCAGAGATAAGGTGAAAATACCAGGAGGTCGACAGATTTTCGTTAGCCGTTGCAGCAGAAGGAGAAATTCTCTTTCAGACCAGTTGGAATGTCAAAAAAAAATTTAAAAAAAACTAAGAAAAATTAAGGGTCGACAGGAATGACCTTTTGAGCTATGATAGGAGTAGAGCTGAATAAGGCACCT # Right flank : TTGTTTGTCTAGTTTTTCTGGGACTGACTTACTTTGTTTTAGAGCTATGTTATTCTGAATCATTATAAAAAAAACGCCCTCAGATATCGCTGGGGGCGTTTTTTAATGCGTTACGTCGTTCGCTTATAATTTGCTCTAACTCCTCTAAATCTTCAAGAGTTGACTGGTTACGAATGAATGAGCGAGAGCGGGAGCGATCACTTAAATATTTAGCACGTTGTTTATTTTTATCTTGCCATTTTTTATTTGCTTCTGTTTGAGAATTCTTTTCCATTTTAAGACCTCCAAAATAGGACTGCCAGAAAGGTAATACATACGACCACAAGTAACCAAAAAGGCGAGAAAATAAGTTTAGCATTTGTTTTTGGTCGCCCATCTACATTTTTATCATACTCAAAAATAGTTATCTTTTTCATATCGCATAAATGTGGTATAATTATTTTAGAAACACAGGAGCTTAGCGCTCCCATGTTCTTATAAACGTGAACTGGAAAATTAGA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCTATGTATTGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 11391-12273 **** Predicted by CRISPRDetect 2.4 *** >NZ_AODM01000027.1 Listeria fleischmannii FSL S10-1203 c24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 11391 30 100.0 40 .............................. ACACGTAGGCTCTTAAAGTTGTTTGCATTGCTGATGAAAA 11461 30 100.0 36 .............................. AACTATTATGCAGCACAAATTAATTATGACGTTGAG 11527 30 100.0 34 .............................. AAAGCAGTCGAACAGGCAAGCGCTGAATATAAGT 11591 30 100.0 36 .............................. CAATAAAAGTAAAATGCTGACTCGCTAAAATATTTT 11657 30 100.0 35 .............................. GAGGTTGCTTGAAGTAACCCTTGCAGTGGAACTAG 11722 30 100.0 35 .............................. TTTCCTGTCATGTCTGTGTTATTGCCTGACACAAA 11787 30 100.0 36 .............................. GTGGATATGGCGTACATGATGAAAAAACCAGAGGCA 11853 30 100.0 35 .............................. AACTTTTACTAAGATGTCATAATTTGACATATTTT 11918 30 100.0 35 .............................. CCAAAACCATGACCTCGAATTCCGAATCCCGCAAA 11983 30 100.0 35 .............................. CTTGACGTCTTTTTCTTCTGTATCCAAGGTGTTGT 12048 30 100.0 38 .............................. TCTTGAATCCGTAAAAAATCGCTAGGTAAATCTGCCGT 12116 30 100.0 35 .............................. ACAACCGCAGGGAGTACTGACAGCACACAGGCCCT 12181 30 100.0 35 .............................. GTTTGTGCTTCAAACGTTGCTTTAACACCTGTAAC 12246 28 90.0 0 .............-.....-C......... | ========== ====== ====== ====== ============================== ======================================== ================== 14 30 99.3 36 GTTTTAATCTATGTATTATGAAATGTAAAT # Left flank : TTATCAAGGTTTTAAAATGTGGTGGTGAATGATGTATATTATCTTAATTTACGATATTCCAAATGACGAAGGAAGTGCTAAAGTTTCACGCAGGATTTTTAAAACGTGTAAAAAATATCTAACGCATATTCAAAAGTCTGTTTTTGAAGGTGAAGTTACACCAGCACTTTTAATGCAATTAAAACTAGAGCTAAATCAACATATTCGTAAAGATACAGACTCTGTTATCATTTTTAACGGTCGTAGCCAAAAATGGTTAGAAAAAGAGTTTTTAGGTATTGAAGATGACAAGACATCCAATTTCTTCTAATCTGTCGATATGAGATAGCGTAAAATTCCGAGGGGTTCGACAGAAACGCGAAATTCATTCAAGGAGAATGAGTTTCGCGTTTTTTTTGAATTTCTAATACATATAAATTCATGAATTTTGATAAAAAATTTAGTGGTCGACAGAAATACCCTTTTGAGGTAAGATGGGAGTAAGGTTTATAAGAGCACCT # Right flank : TTCTGATATGCGGATTAATCAAAAATCTACCCCTTTTGTTTTATTCTAAAATATTCATCAAAAACAAAACCTATTCCAGAGGCTTGCGAACGGATTCCTCTACGAACAGGTTTTGTTTTTGAGTATATAAGATGTAATTTCACTGCGTTTTAAAATGAACAAGAATGTAGGTTAACAAATTGCGCGTTTGCGTTTTTTTCCGACACGGCCCATTTGAACAGCTTTTTCAATGTAGCTGGATGCAACAGGGACTTTACACGCCGTGTCACCCATGTCGACGTAGACAGTGCCTATTTTTTTAGCAACGGCTTCTGCTTTTTGAAGTAGTGGGGGATAGTAGGTTCCGGTGGCGATGACGAAATTGTTCATGGTGTATCTGACGCCGTTTTTGGCGTTGTGGATGGTTTGTTCGACTTTTTCTAACAAAAGAAGGACTTCGTCTTGATTAATTTCTTCGTTTGGTGCAATGGAAAGATAATTTGCGTAGCAGCTCCAGCCAG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCTATGTATTATGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 46677-45732 **** Predicted by CRISPRDetect 2.4 *** >NZ_AODM01000038.1 Listeria fleischmannii FSL S10-1203 c34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 46676 30 100.0 36 .............................. TCGCGTTCAATACTTTATAACTGTTTACATAGCCCA 46610 30 100.0 35 .............................. TCACTTTTTCGACTAGTTCGAAGTTGTCTGTAAAA 46545 30 100.0 36 .............................. TTACCCAACCCCCGTTTTTAAGTATGCGTTTTCAAA 46479 30 100.0 34 .............................. ACACTAACCACGATCCCTGCTAATATGGTGGTGA 46415 30 100.0 35 .............................. GTTATTGACATCGAAGACTTAACAGCCGAACAGCA 46350 30 100.0 35 .............................. AAAGGAGCGAATACAAGTTCTAATAATCAATATGA 46285 30 100.0 36 .............................. GTAAAAGGAGACATGAATAAAACAGGTAAAGAAAGT 46219 30 100.0 36 .............................. TTCTATTTTTCTTGATCTGTCAACATAATAGTGTTC 46153 30 100.0 35 .............................. CATTTCCACGCATTGCAGTTATAGACTCTAAAGAA 46088 30 100.0 35 .............................. TGGTGAAAATGTTGGTCAAAATAGAGGACGTTCTA 46023 30 100.0 36 .............................. ATGAGAAGCCCGCACAATTGAGAACCTCCACATCAG 45957 30 100.0 36 .............................. ACGAACAAATTAGTTGAGTTTAAAAAGCGCACTGGA 45891 30 100.0 36 .............................. TTGTATGTTCCGTATTTTTTAATGAGTTCAGGGGCT 45825 30 96.7 35 .........................G.... GTATTTTCAACATAATCACTGCCTAATGTATCTTT 45760 29 90.0 0 ...................-.G.......A | ========== ====== ====== ====== ============================== ==================================== ================== 15 30 99.1 36 GTTTTAATCTATGTATTGTGAAATGTAAAT # Left flank : CGTTTTTTTTAATTGCCTGAAAAGGCTGTTGTATGTTTATAAAAGTTACTGGAAGGAAAGACAACAAGGGACGTATACCGGTACAAGTGAAACCAAAAAACCAATTGATTATACCCGTATGGAATAATTCGAAGCTGCGAGGTGGGAAAATTAAATGATAGCATGTAGGGCAGGCACTATCTTGGTATGATCACGGAAAAGGATATTTAGAATTGTGGTACTCAGATAGTGGATGGTATTATGCAGCACAGTATACACTAAAATAAAATTCTTCCCAAGATTTTCTTAAAAAGCGGAAAAATGACTATCTGTCGACCGGAGATGAGGTGAAAATGCTGGAAGGTCGACAGATTTCTGTTAATCGTTGCAGTAGAAGGAGAAATTCTCTTTCAGACCAATTGGAGTGCCAAAAAAAATTTAAAAAAAAACTAAAGAAAAATTGAGGGTCGACAGAAAAGTTCTTTTGAGCTATGATGGGAGTAGAGCTGAACAAGGCACCC # Right flank : AAGAGGCATACATAAAAATAACGTTGGCTTTTCCCTTTTAGGAAAGTCTTTTTTTTATTGTTCAACAAATAGACACACCTATACATCTTCCAGAATGGTATACTAAAAGTAAGGAGGAGATGGGATGAGTCGAATTGACATCGGAGAAGTGAGGCATTTTCTAACCATTTTAAAGCAAGCCAATGCGGAGGCACGTGTCTGGTTACTCCAATTAAAACAAACAGTCGAACGTTATGTGCAGGATGATAGCTTATCGGGAAAAGCGGTCGAAGCGTCTAAATCTTATTTTGAAGCAAGCTATCCGCCCTTGATTGAGACGATTTTACAAGCTTTTGATACGAGTGAAGCGCTTTTGGCACAATATATCCAAGCGTTTCATAGTCAAGTGGATCCTTCACCTAATGCGCGAATTGATGCTGTTTTACTGGGGCAAGCGATGGAAAAAGTGAAAAGCATTCGAAGGAAGCAAGAAGCGTTACAACAATCTTTATCGGGCGCTA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCTATGTATTGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 55-288 **** Predicted by CRISPRDetect 2.4 *** >NZ_AODM01000093.1 Listeria fleischmannii FSL S10-1203 c84, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 55 36 100.0 30 .................................... GAGATGTAATATCAATATTTAAGTCTTCGT 121 36 100.0 30 .................................... TTGTCATGGCGAGGAACCTATTTAGTTACT 187 36 97.2 30 .............T...................... CTACACCAAAAATGAAACAAGTTTTTGGTA 253 36 88.9 0 .............................AC...TT | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 30 GTTTTAGTACTCTCAGAATTTTAGCTACTGTAAAAC # Left flank : TCAGAATTTTAGCTACTGTAAAACTTCTGAACAATCATTTCACTAATAATACCAG # Right flank : TATTAGATGTGATTGATCCTAATTTGAAGAGTTTCATTGTTCTCAGATATTCTTATGATTTCATGTAAATAAAAAATGCTAGAAGCAGACTATTCGCTGCTTCTTTATTGTATCCAAATAACTATGTCTAAATAGAACTAAAGTCTATCTGCTGTGTTCAAAAGCCTTATTTTATACAACTTTTTATCTAATTGACTCCAAAAGTACTATTTTTGTCAGAAAGCTACTTTTTACTTTCTTTTTTTTTAGATTTACTCATTATATTTAAGTTATTCATCAAGAGTTTCTCTAATTAAAATAAGGGGGGATGTAGAATTCTGAAAAATTAATATCGTGTTTTGCCAAAGGAAGATGGTCGGTTTTTTGTAAATGTTGGGGGGACATAAGCAAATCGCAAAGACAGGAAAGAAAAACATGAGAAACGCCCTTTCATTGATTTTCATTATTTCGCTTAAGGGATAAGCGATAGGGGGAAAAATGATGGGAAGAAAAAGTAAGGT # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTCAGAATTTTAGCTACTGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 20614-18600 **** Predicted by CRISPRDetect 2.4 *** >NZ_AODM01000061.1 Listeria fleischmannii FSL S10-1203 c56, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 20613 36 100.0 30 .................................... TGATTCCCAGTTTTCTTTGTTTGCCTCCTC 20547 36 100.0 30 .................................... TTATTACCTGTTTTGCCGGAGCAATTCGAT 20481 36 100.0 30 .................................... GCGCATCTTCACCCTCGTCATACTCCTCGA 20415 36 100.0 30 .................................... TGACTATCATGTCATGCAACTCGTAAAAGG 20349 36 100.0 30 .................................... AATTATGTGAGAGAAAACGATGTATACAAA 20283 36 100.0 30 .................................... AAATGAATCAAGAACTTAAAAATCAAACTA 20217 36 100.0 30 .................................... TCATACGTTCTTCATCTCCTTCTTTTGGCT 20151 36 100.0 29 .................................... CTACTTTGATGAAAAGAAAAGAACAAGAC 20086 36 100.0 30 .................................... CTAATATCAAGATAAGTCACGGCTTCTTCA 20020 36 100.0 30 .................................... AAAGGAATACGTTTGATAAACAAGAATTAA 19954 36 100.0 30 .................................... AGTTCCCTTTATGTTTTTGCCCCTCATCTA 19888 36 100.0 30 .................................... TTCTGAACAATCATTTCACTAATAATACCA 19822 36 100.0 30 .................................... GAGATGTAATATCAATATTTAAGTCTTCGT 19756 36 100.0 30 .................................... TTATTGCAAATGACAACAGAATGATACCTT 19690 36 100.0 29 .................................... ATGCCAAGAATCGAAACGGTATGGTCGGA 19625 36 100.0 30 .................................... TTCATTGCACTAAGAACAGGCATGCGTTTT 19559 36 100.0 30 .................................... AGTAGATAGTGTAACTAATAAGCCATTAGC 19493 36 100.0 30 .................................... AGCCAAACTGACTTCCACGCCCACGATATC 19427 36 100.0 30 .................................... GGAATGTAAATCGCTTTGGATTACCTGATA 19361 36 100.0 30 .................................... AGAAGACAAAGAAGTTAAATCTATTTCACG 19295 36 100.0 31 .................................... TGTAACATTTTCGGAAACGTCAAAACCATTG 19228 36 100.0 30 .................................... AGAAACGTATCTTTTACGAGAATGACCACG 19162 36 100.0 30 .................................... ATGTCTGTGAGAGGTCTTATATGGCTTTTT 19096 36 100.0 30 .................................... ACCATGCAGCATTTCCCTTTTTCACAAATT 19030 36 100.0 30 .................................... AAACTGCGAAGCTTAAAGATGCTGTTGCAA 18964 36 100.0 30 .................................... AAGCACCCCGCGAGATATACGAGGTGCAAA 18898 36 100.0 30 .................................... AAGAAGAAAGATTAATTTTACAAACCAATC 18832 36 100.0 30 .................................... TCAACGAAGCTCTTCCAATCTCCTCCCCAT 18766 36 100.0 29 .................................... TTGATTCAAGGCTATCTACGCGGTTCAGA 18701 36 100.0 30 .................................... GAAATGTTCAACCATCTGGTGACGTTAAAT 18635 36 97.2 0 ...........................T........ | ========== ====== ====== ====== ==================================== =============================== ================== 31 36 99.9 30 GTTTTAGTACTCTCAGAATTTTAGCTACTGTAAAAC # Left flank : TAAAAATATTGATGATACACTAAGTTATCAGGAATATGAGGAAGTTATGAATTCCATGAAGCGACTTACCACTAAGCATCCTAACTTCTATTGTATGGTTTTCCCAAGTCAAATCGGATATGTTTATATTAGCGAGGAACATATTGAAAGTATATTAGTTGTAGGAGAAGAGGCGCATTCGCTCGCTGATTGTCGTAATTTATATACACGTGTTTGCGCCTATTACCCAGATCAAACTATTCCTAGCTACAACGAATTTTTGGGGAGACTAAAAATGATTGCCCCTTATTTATTTACAAGCAAAAAACAAAGCATCCAAATGAATGTAAAAGAACTGGTTTTAATTAAAATCATTAATGAGCTATTCCAGTACTTTGACCTTATTCCAGTAGCAGTATTACAACACAGTCAACTAGAGTATGATTTTTTATATGAAAGCTGATAAATTTTATGATAAACTAAAATAACAGTAGTTTTTAAAAATCTAAAACCAATTTGAG # Right flank : TCTATGTGGAGATATTGGGGTTCGCGCCGAGTTTTAACACTCTCAAAATTTTATTTCCCATATGTTTCCTAAAAAATCACAAAACCATTTGCTTCTCCAAAATCTAATTTTGGAGAAGCAAATGGTTTTTAGTTTGGCTTGGGTAGCCGCTTGATTAAAATGGCAGTTTGAAATTGCCGAAAGGATTTTTGCCTTTTTTGCCTTTTCCGCCCATGCCGCCGGACATTTGTTTCATCATTTTTTTCATTTCATTAAATTGTTTGAGGAGGCGGTTGACCTCTTGGATTGGGCGTCCGCTGCCTCTTGCAATTCGTTTTCTGCGGCTGGCGTTGATAATATCAGGATTGTCTTTTTCATTTTTAGTCATGGATTTAATGATGGCTTCGATATGTCCAAGTTGTTTATCGTCGACTTGCATATTATCGAGGCCTTTCATTTTGCCGGCGCCAGGTAGCATCTTCAGTAGCTCATCAAGCGGGCCCATTTGCTTCACTTGACCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTCAGAATTTTAGCTACTGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //