Array 1 320717-319729 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCMW01000001.1 Pseudomonas aeruginosa strain F69A isolate IST27N IPC85_1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 320716 28 100.0 32 ............................ AGGTCGAAACGAAGGTGCTGATGGGTCGCCTT 320656 28 100.0 32 ............................ AATAATAATACTCAGCCCTAGCGCCCTGAGCA 320596 28 100.0 32 ............................ ATGTCGTGGCGGTCCTGCAGGCCCACGATTCC 320536 28 100.0 32 ............................ ACCGGGGTAGGCGCCGATGATCGCGCTGACCA 320476 28 100.0 32 ............................ ATTCCAGCATCTGGGACGGCGATCGCGATTCG 320416 28 100.0 32 ............................ GCCATCGACCGCGAAGCCGCAGACGGCATTAC 320356 28 100.0 32 ............................ AATCCGTCCAGGCGGAGTACGCAACCACCGTC 320296 28 100.0 32 ............................ TGGTAGACGGGATATGGATCGGCGAAGTCCTC 320236 28 100.0 32 ............................ GATGACGAAAGAGCCACCGCCGCCCTCCACCG 320176 28 100.0 32 ............................ TCCCATAGACTTGCCGATCTCGGCTGCGGCGC 320116 28 100.0 32 ............................ TTGACCAGATCGCGGCGTGGGGTGGTCGGCTT 320056 28 100.0 32 ............................ TGCCCGCCATCAGCGAAACCGAACATGCTTGT 319996 28 100.0 32 ............................ AGTGGGCCGTCCCACTCAGTGAAGAACGCCCC 319936 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 319876 28 96.4 32 ....................T....... AGACAATCCGGACCTGCCGCCCAGGACGATCT 319816 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 319756 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 17 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGTCAAGGCAGGCACAGAAAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //