Array 1 79793-81214 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134522.1 Neisseria meningitidis strain NCTC3372 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 79793 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 79859 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 79925 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 79991 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 80057 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 80123 36 100.0 30 .................................... ATGCCTTTTTTTGTACTGTTGTTTGAACGA 80189 36 100.0 30 .................................... AAATTCGTTTCAGATAGCAAACGCAGTAGT 80255 36 100.0 30 .................................... GCCGGATATGACGGTGGGCAACTGGTACAG 80321 36 100.0 30 .................................... GCCGGATATGACGGTGGGCAACTGGTACAG 80387 36 100.0 30 .................................... ATTTCGCTTTTGTATTGATTCAAGGTGCTT 80453 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 80519 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 80585 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 80651 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 80717 36 100.0 30 .................................... CAATAACGGCGAGTTTACGCATCAATGCGG 80783 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 80849 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 80915 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 80981 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 81047 36 100.0 30 .................................... CGCGTACCGGCGCACAAAACGGCGATATTA 81113 36 100.0 30 .................................... AGTCCTGCCGAAGCGGCGACTAATGTGCAA 81179 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //