Array 1 1711216-1716265 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN046795.1 Delftia acidovorans strain 2167 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================================================================================== ================== 1711216 32 100.0 33 ................................ CTCAAAGCTGGTCAGGTAGTCATCGGCGGTGCC 1711281 32 100.0 34 ................................ TCTGGAAGCTTGATCGCATCGCTCGGAGTCTTCA 1711347 32 100.0 34 ................................ ACCAGCGCTGATGCTGCTTGTGCGGCTGGCTTGC 1711413 32 100.0 35 ................................ CCTAACGCTGGATACTGGCGGAGGCTGTACCTTGC 1711480 32 100.0 34 ................................ CCCACACGTCCCCCCGCTATGACGATGTGACAAA 1711546 32 100.0 33 ................................ TCTTACGGGGAGGTAACTATTCCATATTCGCGC 1711611 32 100.0 35 ................................ AGCCGCATCTGTGGGCCGCTGAGCATCCTGTCCTC 1711678 32 100.0 34 ................................ TGCAGATGTGATGTCGTGCGAAGTGCCCGACACC 1711744 32 100.0 35 ................................ GTCGCGGCGGACCAGGAAGTCAGCCGGGTGCAGTA 1711811 32 100.0 34 ................................ CAGCACTATCGATGAGCTCGCAGAAATGTCGGGC 1711877 32 100.0 35 ................................ AAACCCAGGCTGCAGGATTTCCCGCATACATCCCC 1711944 32 100.0 33 ................................ AAGGCTGTGGCCGTGTATGAGTACCAGGCACGC 1712009 32 100.0 34 ................................ AGCGTGGACTTATTGCAGGCGCTGCTATGGCAGC 1712075 32 100.0 34 ................................ TTCCGCTTCGTCAGGCCGCTCAGTCACCATGCGA 1712141 32 100.0 34 ................................ CCTCAGAACTGGTCACAGGCAAGAACCTGGACAG 1712207 32 100.0 35 ................................ GACAAGAGCGCAAGAATGCTGCTTGGGAGCGCTTC 1712274 32 100.0 34 ................................ ATAGTTCACTTTGGAACAAGCATGGAAAACACAT 1712340 32 100.0 33 ................................ TACGCAGCCTTTATTGGCATCCTGGGGGCTGTA 1712405 32 100.0 35 ................................ TGCTGCGCCCGGGGCGGGTATGTCGTATGCGGCTC 1712472 32 100.0 36 ................................ GATCATGAACGCCGCCCAGGCGCGCAGGCGCCAATG 1712540 32 100.0 34 ................................ CAACTTTTTCGACCGCTCTGTCGATAGTTGTATT 1712606 32 100.0 33 ................................ GTCATATGCGGGAGCAGTCCATGGGCGATCCGA 1712671 32 100.0 35 ................................ TCGCCCGTGCGGCTGTAGTGCCACTTGCGCAGACC 1712738 32 100.0 37 ................................ TTTGCTGGGTCCAATGCGCCGCAAACTGAGCTACCGG 1712807 32 100.0 35 ................................ CATCAGAGGACCACCAGAGACAGGACGAAGGCCAT 1712874 32 100.0 33 ................................ AGCCAGCGTGGCCAGGCCGCTCCTGCCCTGCGG 1712939 32 100.0 33 ................................ GAGTTCAGAAGCACCGTCGAATAGATCAGCCTG 1713004 32 100.0 34 ................................ ATCAAGCGCATCGGCGGTAAAGCTTGATGATGGC 1713070 32 100.0 33 ................................ GACACCCTCCTGCAGTTCATTGAGAACTGCGGC 1713135 32 100.0 33 ................................ GCCGGGTTGCGTGCAGATGAAGTAGCCAGACAT 1713200 32 100.0 34 ................................ GCACGTCCTGGCTATCACGCCGACAGCGCCGAGG 1713266 32 100.0 36 ................................ GAGGCCGACTACCGCGGCGTGCTGCTGCGCGTGGAC 1713334 32 100.0 33 ................................ ACCAAGATGCAGGTCCGCTACGGGGCAACGTGG 1713399 32 100.0 35 ................................ ATCGTGCCGATGGTCCGGGTTGCCCGGGCCAATGT 1713466 32 100.0 34 ................................ GCCGATCTGGTCAAAGCAGCTACACCGCTTCGGC 1713532 32 100.0 34 ................................ TACGGTGCCCCAGGGCGATTATTGCGCTCGTAAT 1713598 32 100.0 34 ................................ CCTGCAGTGGTGCATGCTAATTTCTCACGCCCTG 1713664 32 100.0 34 ................................ ACGCCTGGACAGACGCGCGTTCTGCCCGCGCCCC 1713730 32 100.0 33 ................................ CACGATGACGCGGAAAAGCTGCAGCCCCTGGTC 1713795 32 100.0 33 ................................ GGCACAGACGTGGCGCCGCTGGCATCGCTCAAC 1713860 32 100.0 33 ................................ GATGACACGAAGTTGATCGAAGAGCTGGAGAAG 1713925 32 100.0 33 ................................ TCCTGCTGTAGCGCCGCGCGGCGAGTGCGTGTG 1713990 32 100.0 34 ................................ ATCATCCTGGCCGCCTGCGTGAGTAAGCAATGGG 1714056 32 100.0 35 ................................ CTCACGGATTGCGCAAGCCGCGCCGGAGCAGAAAC 1714123 32 100.0 34 ................................ TTCGATGCCATGTCTATTACAAGCGGCGGCATTG 1714189 32 100.0 34 ................................ CAGACGCTGCCCCCGTGGTAGCTCACGGGCTTGG 1714255 32 100.0 33 ................................ ATATGCGGTTTACCAAGGAAATCTATGTCTACC 1714320 32 100.0 33 ................................ GGGGCCCGCTGGACTGGAGCGCTGCGCTTCGCG 1714385 32 100.0 33 ................................ ACTCGGGGGCGCGGGCGTTACCTGAACAACAAT 1714450 32 100.0 35 ................................ ATCGCGGGGTCGTCGCTCGCATACCAGGAGAGAAG 1714517 32 100.0 34 ................................ TTCACGCGCAGCAGCACTGCGCCCCAGCCACCGG 1714583 32 100.0 34 ................................ CCCCACCGGTACCCCCGCCCGTGCCGCCCCCGTT 1714649 32 100.0 33 ................................ TGGAGCCAGCGCACGCAGCGCGTGGCCTCTGCT 1714714 32 100.0 34 ................................ GTACGAGTGGGCAATGGCATCGACAGATCTTCGC 1714780 32 100.0 34 ................................ GTACGAGTGGGCAATGGCATCGACAGATCTTCGC 1714846 32 100.0 33 ................................ GGCTGCCGAGCAGTTGCCCCTGTTTCGCTGCTC 1714911 32 96.9 34 .....A.......................... ATCTCGAACGAGGCGATTGCCACGCGCTCGCCCT 1714977 32 100.0 35 ................................ CTCGATGCTGAGCTGCACATCTCCCTGGTCGGCCA 1715044 32 100.0 33 ................................ ACGCAGGGGCCAACGCTGGACGCGGCCATTGCA 1715109 32 100.0 34 ................................ TATTTGTTCTTTGGTCACTTCGCCCAGGCGCATC 1715175 32 100.0 33 ................................ TTTTTTGGGTGGTTGGGTATTCCCCAATCCAGC 1715240 32 100.0 35 ................................ CAGCAACTCAAGTCCCAGCTCACAGCCAATCTGAG 1715307 32 100.0 33 ................................ TGTCGCCACGTACTACCTTGGCACACATTGCGC 1715372 32 100.0 34 ................................ TGCAGCACGTCCTTGACCTGCGACTCAACGAAGG 1715438 32 100.0 35 ................................ AAGCAACTGGAGGCGCCCCAGGCCAGCGAGAAGGT 1715505 32 100.0 36 ................................ GCTCCGCTGTTCGACTTCGACGGCATGGGCATCTAC 1715573 32 100.0 35 ................................ TTCGGCGTGGCCGTGCGCAAGGCCAACGAGCGCGT 1715640 32 100.0 33 ................................ AAGCGGCGCTCCAGACGCTCCACGTCTTTTTTC 1715705 32 100.0 35 ................................ CTGTCCGTGCCAACCTTTCTCATCGGCAGGCCAAG 1715772 32 100.0 35 ................................ TCTCCAGTCCAGAAATGCCAAACGCCAGCGCAAAG 1715839 32 100.0 33 ................................ CATTTCGCCCTCGATGCCCGCCAGCAGCACAAC 1715904 32 93.8 35 ...........C.....A.............. TCCCAGCGCATGGCCAAGCTCTCCGAGGTGCGCAG 1715971 32 100.0 34 ................................ GAGCGTTGCGCAGCGGGCCTCCAGCTCCATCAGG 1716037 32 96.9 33 .................T.............. GACGCACTGCTCAACTACGCGGGCTCCGTGCAC 1716102 32 93.8 100 ..........A.T................... GACCCTGGCACCGGTGCCTACCTCAACGACATCACCTTGTGCCCCATGCGGGCGTGGATTGAGACATCTCGCACCATCTGCACGAGGTCTATGAGATCTG 1716234 32 75.0 0 T.G.......A.A.....A.......G.T.T. | ========== ====== ====== ====== ================================ ==================================================================================================== ================== 76 32 99.4 35 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : CAGGCGATGAAAAATGAGGTGCGCCGATGATGGTCCTGGTGAGCTATGACGTCCGTACCCAGGACCTGGATGGTGCCCGCCGCCTGCGGCGCATCGCCAAGGCCTGCCGGGACTTCGGCCAGCGTGCGCAATACTCCGTCTTCGAAATAGAAGTGGACGCCGCGCAATGGGTCGCCCTCAAGGCGCGGCTGATGCAAATCATCGACCCCGCCCAGGACAGCCTCAGGTTCTACTACCTGGGCCAACACTGGCGCAGCAAGGTCGAACACATCGGCGCAAAGCCCGTGCTGGACCTCGACGCCCCCCTCGTCTTCTGAGCCTCCGCGCGAACCCCAAGTGACCGCCGCCTGCCCTTGAGGTTCGCGGCCGCGCAAGCTGTTGTTTTCAAAAGGGGGTGGGCGAGCGAATGGCTGAACGCCGATCCTGCGGCATGACAGTGCCGCCTGGTTCGCGGAAGCCTGGCTTTTTTCATAGCGGTGAAATTGCTCTATAAGTACCCC # Right flank : CCCCCGTTTGCACTGCAGCCTCGTGTGGTGAAGCATGGGGAACTTGGGAGTTTGTGGCGGTCATGCCCCATCCTCGAACGTCGCTCAACCCCCCTTCCAGGGGAAAACCCCCGGGCGCCCGCGCCGCAAATGCATAGGTCTGCGCATGAATCGTTCAGGCCCGGTGCCATCCCTGCGGAGAATTCATGAAAGGAGCCTGCAGGGCATCGCAACCACGGGGCTGCATGCACCCGCAATAACAAGAAGCACAAGAACAAGAAGCACAAGAAAAAGGGCTGGCGACCGGTTTCAAGCTGCTCCCATGGCAGCCGTGCTGCGGCCATGGGGATTTTCGCCAATCGGCAATGTCAAGGAGGAGAGGGATATGAATAAACGCATGATCCGCAGCGCTGGCCTGGCCGCGCTGGCGCTGGGCACGGCCCTGGCGGCCCAGGCCCAGAGTTCGGTCACGCTCTATGGGCGTGTGGTCGCGGGGGTGGACTACCAGAGCAATGTGTACG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //