Array 1 88617-88390 **** Predicted by CRISPRDetect 2.4 *** >NZ_SWXC01000002.1 Clostridium sporogenes strain IFR 18/154 contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 88616 30 100.0 35 .............................. AAGCACAGCTCAAGCAAGTTCAACTATGCTAGAAG 88551 30 100.0 36 .............................. CAACATAAATAATATGTGGTGGATAATTCTTAATGA 88485 30 100.0 36 .............................. TAGTAGGGTGTTAAGATTTATAGGGAGAGAGTTGCC 88419 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 GTTGAACATTAACATAGGATGTATTTAAAT # Left flank : GGCAGCATTTGCACAGTCAACAGGCAAAGGTAATTCAAATGGTGAAGCTAATGAAAGCCAAAATGCAGATGATAATCAAAATTATACAGTATATAAAACCAGAACTGGATCTAAATATCATAGTTCAGGATGTAGATATTTAAAGAAAAGTTGTTATGAAACAACAGTATCACAAGCACGAAATGAGGGTTTAACTCCATGTAGTGTATGCAATCCATAACATATAATAATATGTTATGGATAAGTATTAATTGTACTTTCTAGGTATTGATGAATGTATTTTATTAATATACTTAATGAATATAATATATATCTAATTAAATTTTTCCAAGCAAATTAAAAATAAAAACCTATTCTAGCTATTGAAACATAAGGCCTAGAATGGGTTCTTATTATGTATTTATAAAAAATTAAAATAACTTGGAAAAATTTTTATGAAACCTTGTAAAGTCAATGGGTATATGATATTCTTAAAAATAAACAATGGCTATTTTACTATG # Right flank : GTTTCTAGAGAACACTTTGCTTCTATACTAGAAAAAATAATACTATAAGATGTTTTATTAGAAATGGTAGTTGTAGCTTATGCTACAGCTATCATTTTTAATTTTTTGATAAATTTTTTAAATGAGATTAGCCATTTATAAATAAAAATTTAAAATAATTAATTTATTAAATTAAAAAATATAGACATACGCTAACTTACATTTAAAATATAGAATAATACATAAAAAAGTAAAAATGTGTAGGATAAAAAAAGAAGGAATTCAATTAATTGTAAAGAATATTGTAATTATAAGGTATTAAAATAAAATAAAAATATCAATAGGGGGAATGAAGATGAAAAAGAAGACAACCATATTAAGTATCTTTCTAGCTGCATTTATAGCCTTATTATTAAATGTAGGTAATGTTAAGGCTGCGGCAACTGGACAAGATATAGTAAACTATGCTAAGCAATTTCAGGGAGTTCCATATGTTGGGGGCGGTGAAACAACAAGTGGAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 92896-92606 **** Predicted by CRISPRDetect 2.4 *** >NZ_SWXC01000002.1 Clostridium sporogenes strain IFR 18/154 contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 92895 29 100.0 36 ............................. TAACTAGGGTTAAGATTATTAACCGCTGTAAATCCG 92830 29 100.0 35 ............................. AAATCTTTTTGGGACATTTGCGTTATGTTTGCAAG 92766 29 93.1 37 .......AC.................... GAGGCTTATTTATTATTAATTTAAATAAAATAAAAAC 92700 29 93.1 37 .......A......A.............. TTTCTTTCTCTTTCTTTTTCAAGTAAAGTTTTTTGTG 92634 29 89.7 0 .......A...................TC | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 95.2 36 TTGAACATTAACATGAGATGTATTTAAAT # Left flank : TTAAAGAAGTAAGAGGCGGAGAAGAAAAAAGATTTGATATAGTTATAACCTATAATAAAAAGATGTATATTCTAGAACTTAAAATATGGAGAGGTGAAGAATATCATAAAAAAGGTTTAATACAACTAGCTGAATATTTAAATCAATACGGATTAGATAAAGGATACCTTCTAATATTTGATTTAAGAAAATCCACAAATCTAATAGGTGAAGTAGATGAAAATTATATAGGTATAGAGAATAATAATAAAAAAATAATACAAGTTTATTGTTAGAATAATATATAAAAAATGAGTATAGATAAGAACAGGACTCTAAAGTTTTTTTCAACCAATTCTAATTCAAAAACCTATTTTAAGCATTGAAGTATAAGGCTTAGAATAGGTTTTTGTTATGTATTTTTAAAAAATCAAAATCACCTGGAAAAACTTCTATAAAACCTTGTAAAATCAATGGGCGTATGATATTCTTAGAAATAAAGAATGGCTATTTTGCTATGG # Right flank : AAGAAATGCAATCATCTAATTTGGGATAATCATTTATACATAGTAATAATTTTTGAGTTAAATTGTAGGACTTTTATTGACTAAAATATTTTTGAAAATTAGTTTTAGTTTCAAATTATAATTTAGAATATTATTGAAATTATAGCCCCCATTAAAAGAAAAACTCTAAACTTCTTTTAATGGGGGCTATATAAATTGTTAGATACTAATTATTTAAAAACTTATTTAATGAATCATTATCTTTAAAGAGTTTTTCTAAGCTGCCGTATTTTTGTTCTAAGCTTTTTCTATTATATTCATAGGATTCTTTTTCTATATTGTCTACATTAAATTTAATAATTTCAGCATTTGTTACAAGAGATAATAATACTACTGCATTCTTTTCTAAAAGCTTGGCAGGCTTTTTATCACTCCAAAATTTATTATAATTTTCTTCACCTAAATTTTCATTTGCTTTATAGTTAACGATTATTTCGTATGGCTCTTTACTAGTTTGTAAG # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 2841-2686 **** Predicted by CRISPRDetect 2.4 *** >NZ_SWXC01000015.1 Clostridium sporogenes strain IFR 18/154 contig00015, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 2840 25 100.0 41 ......................... TAAATTCTTTATGAAGTGTGGCATAAATGCAATTAGTACCG 2774 25 100.0 39 ......................... TAAATTTTCTAGTCTTTGTCCAATTAACTAAAGTATCAT 2710 25 96.0 0 ................A........ | ========== ====== ====== ====== ========================= ========================================= ================== 3 25 98.7 40 GTTGAACATTAACATAGGATGTATT # Left flank : ACTCCTCCTTAGATGATATATTAATCTATTGACAAGTAATATTATTACGGTTATACCATATTATTTCGATTTAAATAAATTAATGAAAATAAAATATTAAAGTTATATTTTTGTTAATTTATTATAAAATTAAAGGAAAATTTAGTTTGGGTCAAATTTATTATAAAAATATTAATTTTTTTCATAATATTAACAAAAAATTATTTTGTATAGAAACTTTTTATGATAGTTCAATTAAAAACAATATTACGGATTATGTCGTAGTAATATTTTTTATTATTACACATATTTAAGAATATTTATATAATGAAAGTGCCTTTTATTTTTCCAACCTACTTTAATTTTAAAACCTATCTTAACTATTGATATACAAAGGCTTAAGGTAGTTTTTTTATATAGATTTCAAAATATCACAATCGGTTGGAAAATTTTCTTTAGAACCTTGTAAAATCAATGGTTCTATGTTATTTTTTTAGATAAGGAATGGCTATTTTACTATG # Right flank : ATTAAAAATGGTAGTTGTGGTTTACGCTATAACTACCATTTTTTATTTTTTTCGATAAAAATTTTAAAAAAATAGCAATTTATTAATAAAAGTTTAAAATAATCATTCAAATTTAATTTAAAGACATATTAAAGTGCATAAAAAGTAAAAAAATGCAGGATAAAAAAAGAAGGAATTGAATTAATTGTAAGGAATATAGACATTATGATAAAAATATAAATAAATAGACAAATAGGAGGAAGCAACATGAAAAAAAAGACAACCATATTAAGTATCTTTCTAGCTGTTTTTATGGCTTTAGCACTAAATGTAGGTAATGTTAAAGCTGAAGCAACTGGGCAAGATATAGTAAACTATGCTAAACAATTTCAAGGGGTTCCATATGTGTGGGGAGGTACATCACCAAGTGGATTTGACTGTTCAGGGTTTGTACAATATGTATATAGAAATGCTGCAGGTATAGAATTACCAAGAGTTGATGTAGACCAAATTGGAGCAGG # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAGGATGTATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //