Array 1 2689733-2684901 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPOE01000002.1 Thiomonas sp. FB-Cd CD04DRAFT_scf7180000000012_quiver_quiver.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2689732 28 100.0 32 ............................ CGAAATGCACGCATTCCCCGGAATGGGCAGCG 2689672 28 100.0 32 ............................ AATGCAAGCTGAGTTCGAGGAGTACGGGAAAC 2689612 28 100.0 32 ............................ TTGGCGATCACGGTGTCGTACTTGATGCCAAC 2689552 28 100.0 32 ............................ CGCAGGCACCGCATGGAAAGCAGCCGCCGAGC 2689492 28 100.0 32 ............................ GTGTTACAGAGACGGGGGGTTAGCTCGGCTTT 2689432 28 100.0 32 ............................ CATGCCGAACACCTCGCCCGGTTCGCACCGCC 2689372 28 100.0 32 ............................ CTCGGACGTCCCGCGAAGTTCTGCAGTTGTGA 2689312 28 100.0 32 ............................ ACGAATGGCATGGTGCCGTGAACCGACACAGC 2689252 28 100.0 32 ............................ TCCATCCTTAACCAGCTGCTTGAATGTGGGCT 2689192 28 100.0 32 ............................ TGCGCACGATCCGCATTGAACCTGACACGCTA 2689132 28 100.0 32 ............................ TCCATGAAGCCGACCTTCAGCGCCTGGGCCTT 2689072 28 100.0 32 ............................ GGATACCACGAGAGCGCCCGACGGTTGCACGC 2689012 28 100.0 32 ............................ AGCAGCTCGCGGCATGTCTGATGCCACGCCAG 2688952 28 100.0 32 ............................ TGGCTTGCAGTGGGCATCTTCGGCATCGCCGT 2688892 28 100.0 32 ............................ CCGGCGGGACATTGATCAGCAGCTTGCGAATC 2688832 28 100.0 32 ............................ GCATCGCCGATCTTCTGCGCATGCGCCGCTAG 2688772 28 100.0 32 ............................ AAGCAGCCAAACGTCGCCGGGCTTACTGACCG 2688712 28 100.0 32 ............................ TCCGTTGGTGCCGGGTGTGGCGACGGGGCCGG 2688652 28 100.0 32 ............................ CGGTGGCTTGCTCAACGGCGGAGGCGCGTAAA 2688592 28 100.0 32 ............................ GACTTGTCCGGCTCGCCGTTCTTGTCGTAGAT 2688532 28 100.0 32 ............................ AACATGGGATCCGGAGGCGCCGGACACGCTGA 2688472 28 100.0 32 ............................ CTACTGGTCGGACGATGACCGCCCCCCATGCT 2688412 28 100.0 32 ............................ CGACCAGGCGCAGTCCAAGACGCTGGCGGATC 2688352 28 100.0 32 ............................ CCGAGCAAGGTTGAGCTGACCGGCAAGGATGG 2688292 28 100.0 32 ............................ TTGAAGGCCGCGGCGATTTGCTTGCTCAAGGG 2688232 28 100.0 32 ............................ CAGAACCATCGCATCTGGATAGGCGATCATGT 2688172 28 100.0 32 ............................ GTATCGGACAACCGGCCAAGCGCCGCGTTCTG 2688112 28 100.0 32 ............................ CGACAGGTCGCCATCGGCAAAAATCGCGATCC 2688052 28 100.0 32 ............................ AACGGGTTCGTGCTGGATCGCAAATTCAATGC 2687992 28 100.0 32 ............................ ATCACCTTCACCTTGACGCGCCTGAGCGAGAA 2687932 28 100.0 32 ............................ CTGGGATGGCCCCCTCGTTTGGGGGGGATTCC 2687872 28 100.0 32 ............................ ACCCGCGACACCGCACCCGCAAATTCCCTGAA 2687812 28 100.0 32 ............................ GAGCGCGGGCGCGTTTGACGTCGATGGCGAAC 2687752 28 100.0 32 ............................ ACTAGGACACGCCGCCGTATAGAAATCGACCA 2687692 28 100.0 32 ............................ AAGAGGAACCAGACGGCTTCGTCACGCTGCAC 2687632 28 100.0 32 ............................ TCCCCGCAATTCGTCTCGCGGTGCCACGAATG 2687572 28 100.0 32 ............................ GAAGACACAAGGAGGGCAAGCGCAGCCGCTAC 2687512 28 100.0 32 ............................ AAAAAAATCGGCCGCCTGATCTGCCTCAACAC 2687452 28 100.0 32 ............................ AGTCGGGAGGCGGGGATCGGGTCGCCCTGCTT 2687392 28 100.0 32 ............................ GCTGCGTGAAACAAGGTCCACGAGCCCCTGCC 2687332 28 100.0 32 ............................ ACTTGAATTCCGACACCTTGCGCAAACCAAAA 2687272 28 100.0 32 ............................ ACCCCACCCTCAAACAGCCGAGACGCGAACCC 2687212 28 100.0 32 ............................ CCCCCGTACGCCCGCTGGCGGCCTCGCGCCGC 2687152 28 100.0 32 ............................ ACGATGGATCGGCAACGAAGCCGGCAGACCGC 2687092 28 100.0 32 ............................ CGGGCCTGCGCATCGTGGACCCACTGCTGCGC 2687032 28 100.0 32 ............................ TGATCATTGGCCAGATCACCGCCTCGGGGACC 2686972 28 100.0 32 ............................ TCCAATGTAACCATCGGCGCCGGCACCCTGCA 2686912 28 100.0 32 ............................ ATCGTGGGACAGGTCAACCATTCGGGGGGCAC 2686852 28 100.0 32 ............................ TTGGAGTGCGGCACGAATTCTGTGCTCTATGC 2686792 28 100.0 32 ............................ AATGCCAGCGCGCGCCATTGACGCAAGATGTA 2686732 28 100.0 33 ............................ AACTTTGACGAAGCTCTCGAAATCATCCTCGAT 2686671 28 100.0 32 ............................ GAGCAGGAAGATGACAAGAAACGCCAGCGCCG 2686611 28 100.0 32 ............................ GAGGCCGGGAATGCCACGGATGCCTTGAGCGC 2686551 28 100.0 32 ............................ ATCTTCTGCGATACCGGGAATGAGCACCAGGC 2686491 28 100.0 32 ............................ ATTGAAGACCAAGCGTGGGCCGAGATGCAGGA 2686431 28 100.0 32 ............................ ACCAGGTCGAAACAGCCGGCGACTTCGCCACC 2686371 28 100.0 32 ............................ CACAGCAGCGGGTGCCATAACTTCCGCCGTGC 2686311 28 100.0 32 ............................ AGCTGCCCGCCGGGCGCGGTCGAATCCGGTCT 2686251 28 100.0 32 ............................ GGCCAGCCGGAACCATTCCGCCACAGCAGGGC 2686191 28 100.0 32 ............................ GTCAGCGAAGGCCTCGCATGCCGCCAAGAAGC 2686131 28 100.0 32 ............................ AACATGCTTATCCAGGTGGTGCCGAACCTCAA 2686071 28 100.0 32 ............................ ATGAATGGCTGCCCAGATCACAGCCGCCGCAG 2686011 28 100.0 32 ............................ ATCACGATCCGGCGTTTGTCATTCGGGTCGAT 2685951 28 100.0 32 ............................ CGAGCTTGCTTGCGACTACCTTTGCAACATGA 2685891 28 100.0 32 ............................ GCAACCCGCGCAGGTGCCAGAGGGCTGGCAGA 2685831 28 100.0 32 ............................ GCGCAGGATCAAGCCTGTATTCCCGTGGGCGC 2685771 28 100.0 32 ............................ ATCACCATCCGGGCCGGGAACACCAAGACCCT 2685711 28 100.0 32 ............................ CTGCGGAGATTGTCTGTGGCGCGAGTGGGACC 2685651 28 100.0 32 ............................ AAAATTCCCGCACTCCCGAGCTTGCTTGCGAC 2685591 28 100.0 32 ............................ GGTGCGTGAGCAGGCCGGTCATCAAGGGCTTT 2685531 28 100.0 32 ............................ CGTGGTGTAGATACGGCCTCACCGACGCAGGG 2685471 28 100.0 32 ............................ TCGACGCCAACGGTCGCGGCTCCGATCTGCAT 2685411 28 100.0 32 ............................ AGAAACCCGGGTGATGACGAGAGAGGCGAAAT 2685351 28 100.0 32 ............................ CGCAGATTCAGGGCTGCATGTGGGTCACTGGG 2685291 28 100.0 32 ............................ ACTCCCGCATGGGCCAGAAGGCCGAAGTCAGG 2685231 28 100.0 32 ............................ ACGTAGACGCGCTGCGGCTGGGGCTTGATGCG 2685171 28 100.0 32 ............................ ATGCGGTTGCAGCCGTGCTGGAGCCAGTAGTA 2685111 28 100.0 32 ............................ ATTCTGGATTGGGATGTGCTGCAGATCGAAGG 2685051 28 100.0 32 ............................ GAGGCGAAGTCGCTCACCTTCTTGCGGAAATC 2684991 28 100.0 32 ............................ CACTTGCGGGCTTCTTCGCGTGTCATGCTGCC 2684931 28 82.1 0 ..........A.C..C.........TC. | T,A,G [2684907,2684911,2684914] ========== ====== ====== ====== ============================ ================================= ================== 81 28 99.8 32 GTTCATCGCCGCACAGGCGATTGAGAAG # Left flank : CTTCGCGAAGGAGCTGTACCGGCTCTTGGCGCTTGCCTTTGGGGTGCAGGACTTCGCGCGAGAGCCAGGGGCGAAGCAGAAGGAAACACCAAGGCAGCGGGTGAACAGCTTCCTGGATCATGGAAACTATCTTGCATACGGTTATGCCGCGGTGGCCCTGCACGGCATGGGTATCCCCTATTTCCTTCCGGTCCTGCATGGAAAGACGCGCCGCGGCGCGCTCGTGTTCGATGTAGCGGATCTCTTCAAGGACTGGCTTGTCATGCCCGCAGCGTTCAGGTGTGGCTCCGGAGGGGTCAAGGATGGCGTCTTCCGTGCGCAGGTCATCGAGCTTGCTCTCAAACACGACGTGCTCGATCATGTCATGACCTTCATTTCCGAGCTTCCTGAAAAAATTAAGAAGAAACAGGGACTTGCAGGAGAGGTCAGTAATTGATCGTTTTTTGTGCACATAGTGCCTAAGGTGCTGATTCATCGATCTTTTACAATTTAGATGCACG # Right flank : AAATCGATCCGTCATCAACCCGAGCGGGTTCTTTGCCGGGGTTTATTCAGCGTAGCTTTAACATTGGATGCCCCTTTCAGAACCTTGTGGTGCCCCATGAACCTCGGTCGATGGATTTATGAGATTTCACTCGCGACAGAAGTGCTCATCGCCATGGTGGGTGTGATCGGCGTCGCCGTCTACGCTCGGTTCGCTCGCAACGGTCCCCGCTTGATATCGGAGATCAAAGGCGAGGAATAAGCCCCTCTGGGTCTTGCGACGGCGTTCGTCGGCCTGTGCATGCAGCGGCGATGCCCAAACCGCGCGTCTTGAAACCCGACGCTACCCGTCGCCTCGTGGGTAGCGCCAAGTTTTCTTGAGCAATCTCAGCGCAGCACAAACCTTCGTTTGCCTGAGACTTGGCAGACCGCGTGAATCTTGCGGTGCGCCACCAACTGCTGCACCACATGGCCTGGAATGGGCACGCTGTCGTGGCCCAAGGCGATGCGATACGTGGACGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATCGCCGCACAGGCGATTGAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCATCGCCGCACAGGCGATTGAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //