Array 1 1541970-1542995 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP007181.1 Campylobacter coli RM4661 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1541970	    36	  97.2	    30	T...................................	GCTTTAGGAAATGCTTTAAAACGCTTTGGA	
   1542036	    36	 100.0	    30	....................................	TATGAGTTATCAAGTTTTTGTTTTTAATAA	
   1542102	    36	 100.0	    30	....................................	ATTTGCAAGGTATATAAAAAATTTGATTTT	
   1542168	    36	 100.0	    30	....................................	ATTTAGCTGATACTATCGAATTAATCGTAA	
   1542234	    36	 100.0	    30	....................................	TGATTTTTATGAGTTAAAAAATATTATAGA	
   1542300	    36	 100.0	    30	....................................	GCATCAAACGCTATTGATTGCAATATAGCT	
   1542366	    36	 100.0	    30	....................................	CAATAAAGCGTTTAATGAAAAAGACGAGTA	
   1542432	    36	 100.0	    30	....................................	CTATTCTCCAATTGTTGAAAGAACAGGCCA	
   1542498	    36	 100.0	    30	....................................	ATAATTCCTAATAAAAAAGTAAGTTTTGAT	
   1542564	    36	 100.0	    30	....................................	TACATTTACTTAAGTCTTTAAACTCAGGGT	
   1542630	    36	 100.0	    30	....................................	ACCACCATAACAATTAATAAAATATTGAGT	
   1542696	    36	 100.0	    30	....................................	AAATCGTAGGGCTAAAACAATAGCACGAGA	
   1542762	    36	 100.0	    30	....................................	ATAGAAATTACTACAGCACAAGCTTATGCA	
   1542828	    36	 100.0	    30	....................................	TTTCTTATGAAGTTTTTAAAGGAATTATAC	
   1542894	    36	 100.0	    30	....................................	ATCAAAATTTGATATTCATGAAGTGATTAA	
   1542960	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        16	    36	  99.8	    30	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   CGACATAAAACCAGGTAGACATATCAAAATAGCCAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACGCAAGAGAGATTTTAAACTCTTGGTTACTTCAGCCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGCTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGTAATGTGGAATTTAAAAATGGACGCATTTTAGCCAATCTTGAAGGTAAGAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTAGTACCAAAAGAATGTGAAATTTTAGAAAATGAAAGTTTAGTAGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTTGCACCTCCTTTTAGTGAAGTAATTAGCCCTAGCAGAGTTTCAATCCACTAGGG
# Right flank :  TAGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTCAATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTAGTTGTATTTCTTCATTATTTGAATTTTTGTATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTAGTTTCGTTATTAACTTTTTCATTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAATTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACGCTAAATTGCAGCATAAAATAACCTAATTTTATAAGATTGTTTCTAAATTTACT

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:77.78%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.68   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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