Array 1 66638-67508 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPOH01000016.1 Buttiauxella warmboldiae strain CCUG 35512 buttiauxella_warmboldiae_CCUG35512T_0000016, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 66638 28 100.0 32 ............................ AAAAATCGTCATAACGGGTTAGCACCACATAA 66698 28 100.0 32 ............................ GTGGTGAATTGCGTCAAATGTCATCTGACGGG 66758 28 100.0 32 ............................ AGAAATGCCTGAGCATCATCAGCCGAACGGAT 66818 28 100.0 33 ............................ TGTTCGGGTACGCCGGGACGGGTAAAACAACAG 66879 28 100.0 33 ............................ GGGCTGAACCAGTAATTCATTGTCTCTCCTGAT 66940 28 100.0 32 ............................ ACTTGCTCACCAATATCCGGCATCCAGTAATC 67000 28 100.0 32 ............................ CGTCCAGAAAGGATAGGCGTCATGAGCCTTTG 67060 28 100.0 32 ............................ AACACGGCACTTGGGGCCACACCATATCCATT 67120 28 100.0 32 ............................ AGCATGCAAATGTGTGTCTCGACTCGTACGCT 67180 28 100.0 32 ............................ TTATTGCGGTCGTTGCGCTCTGCCATCAATGC 67240 28 100.0 32 ............................ CATCTGTGAGGCGATAAAGTTCGGGTTGGCTC 67300 28 100.0 33 ............................ ACGTATGCGTTACCCGTGGTTCTATGTACAACA 67361 28 100.0 32 ............................ TGTAGCGTAGATTAGTGTTCCTGCTGCAAGAG 67421 28 100.0 32 ............................ AGCCAGTTCAAAGTTAATGGTCTTGTTATTAC 67481 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 15 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGTAACTTTCCGGACCCGTTTGAGAAGGCTGCGATCCAGCCTGGATGATTTTCAATTTTTCTTCCATTTTTTCCTCCACTGCGGCATGCGCTGCCGGGATAACAGAAATAACACCAGTCAGAAGTATAGGTAACTGAGCGCAACTGATAGCAGGCTTGCGGATTTTTGAGCGCTTCCGCTTTGGCGCAAGGTGCAGAAGACCTATGTTAGCGCCTGTTATGGCGAGCTATATGCGTATCACTGCGGGAGAACACCCGTTGGATTCAGCGCGGCGACTCGTGCTGAAATCGATTCTCAAGGATGAGCCGATACTTATTAATCAGGTATACAGTCCAACACGACTTCTCACTTAAACCTTAGTAAGCGCCAGACCCTATTTTTAGTGATATTTTCAAGCTATTGTTATTGAATGATTTTTTATCAGAGGTTAAAAAAGGGTATAACCAGTAAAAAAACAGTTTTGATACTTTGAATCAGGACGTTATGTTTATATTGTTTCT # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 82282-81954 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPOH01000042.1 Buttiauxella warmboldiae strain CCUG 35512 buttiauxella_warmboldiae_CCUG35512T_0000042, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 82281 28 100.0 33 ............................ GGATCCGTTCGGCCCGGAAACTTCGGTGATTTT 82220 28 100.0 32 ............................ CATCACGCCCCAATGTTCCCGGGCAATGTCTT 82160 28 100.0 32 ............................ AGTGGGTGTTGCTGCGTTTTCCGCTGCGGTGG 82100 28 100.0 32 ............................ CTGAACAGTGGAAGCAAATCCACGCCATGCGT 82040 28 100.0 32 ............................ GATGTAGAAATCATTCAGAGCCTGAACGTTTC 81980 27 78.6 0 .........-..........AA..TT.G | ========== ====== ====== ====== ============================ ================================= ================== 6 28 96.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGGCAGCTTAGAAAAATTGAGTTACTCCATGCTGATATGTCGGGT # Right flank : ATTTAGCGAGCCTTATAACTCTTTTTTGATTTATACCATGGCATTATGAGACTCATTTTTACACATTAGTCGAGGTTCACGGCATTGTGGTAAAACACTTCTGTTTAGCATTTTCATGGCATATTAATAACATTAAATATTTTATATATTCTCGCCAGCCTCCGTGATCTATCTTTGGGAAGCAAATGGTGAATACATTCAATGAAATTAATTGCTGGGATGGCCAATAAAAATTGTGAAAAAATGGCCGTTTCAAACCGGATCTTTTTTCTCGGAGTACTCTTTTCATGCTTATGCCTGCGGATCTTAAAACAATTCTTCATTCAAAACGTGCAAATATTTATTACCTGCAATATTGCCGGGTACTGGTGAATGGTGGGCGTGTGGAATATGTCACCGACGAAGGTAAAGAGTCATTTTACTGGAATATCCCCATCGCCAATACCACTGTCATTATGCTGGGTACGGGAACATCGGTCACTCAGGCGGCAATGCGGGAG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //