Array 1 81517-85088 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLRD010000009.1 Chromobacterium haemolyticum strain WJ-5 NODE_9_length_247986_cov_152.716848, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 81517 28 100.0 32 ............................ AAGCGGATGGCCGCCATCGACCCGCAGGCCGT 81577 28 100.0 32 ............................ TTCTGCTCGTACTCCACTTCCCCGCCGCACAC 81637 28 100.0 32 ............................ TGATCACCCAGGGTCCGCAGCTGATCGACTCC 81697 28 100.0 32 ............................ TCGTGAGCTTGTCACTGCGCCGCCAGCCCCGT 81757 28 100.0 32 ............................ GCTGCACAAATGGACAAAATCAGCGGCATGCT 81817 28 100.0 32 ............................ GGGTGGAACAGCGCCAGCATGCGATTTTCGTG 81877 28 100.0 32 ............................ CGGCGCGCGCGGTTGCTGGCCGCCTTGGCCGC 81937 28 100.0 32 ............................ AGAAGCAAATGCTCAATATTGACCCAACGGCA 81997 28 100.0 32 ............................ TAGCCGATGGTCCAGACGCCGGCCGGGCATTT 82057 28 100.0 32 ............................ GATCCCACCTTGACTCGATAGGTTCCATAGCG 82117 28 100.0 32 ............................ ATTCGACGGCACAGACGGTGCGCCATCCGAGG 82177 28 100.0 32 ............................ TGCACTTTCTTCCCGTTGTGATATGCACTCTT 82237 28 100.0 32 ............................ TGAGTCAGCCACCGTGGATCCGCATACCCAGC 82297 28 100.0 32 ............................ GTCAAGGATTCCTTGATAGTTCAGCAAGCGCC 82357 28 100.0 32 ............................ AAGATCCTGCGCGACTACGGCGTAGACATTTC 82417 28 100.0 32 ............................ ACCCATCGCCATCTTGGCCTGGACATTTTTCT 82477 28 100.0 32 ............................ CTCGCCTTGGGCGGGCTGACGGCGGGGGCGAT 82537 28 100.0 32 ............................ ACTGGGAACCCATTTTTGGATTTATGTCTGTG 82597 28 100.0 32 ............................ TGCTCATCCCTGTCCCTCCATCAAGCTTCCGA 82657 28 100.0 32 ............................ AGTCTCTGCGCTGACGCGCGCCTGGCGCAAAC 82717 28 100.0 32 ............................ AGATCTGGCCCGCAACCATTCCCGTTCCTTCC 82777 28 100.0 32 ............................ GAACCCACTCTATCTGGAAGGGTGCGACCGCG 82837 28 100.0 32 ............................ ATCACCCGCAAGCGAAAACAGTTGGGCATTCC 82897 28 100.0 32 ............................ GGCGACGATCGGGTTGGCCGCGAGTACGACAC 82957 28 100.0 32 ............................ TTGCCGCCGCTGACGCTGACAACGTGAATGAC 83017 28 100.0 32 ............................ AGCCAGTCGCCGAACCGCTCGCACGGCAGGAT 83077 28 100.0 32 ............................ AACTTGAGCGTGGCCGTCGAGTCCTTGCCGCC 83137 28 100.0 32 ............................ ATCCGGAGCGCAGCCAGGTATGCATTAACCGG 83197 28 100.0 32 ............................ TTCTTGAGTCCTAGTAGACCAAGAAGGCCGGG 83257 28 100.0 32 ............................ CGAGCGGGCGCAGGACTTGGCATATATCGCAA 83317 28 100.0 32 ............................ AGTCCCCGCGACGTTCGACGAACGGATTACGG 83377 28 100.0 32 ............................ TTGAATGCGGCCTTCTCGTGAAGCACATACCC 83437 28 100.0 32 ............................ AAGGATCGAAAGACCTGCCGATGGAGACATTG 83497 28 100.0 32 ............................ GACATCTTCACATCCTTAAAACCAAGTTAGGA 83557 28 100.0 32 ............................ TGGAAGCCGATCATGCCCTTGCAGAGGCTGAG 83617 28 100.0 32 ............................ ATCCCGTCGTCAGGATAGATGGCAATGCCGAG 83677 28 100.0 32 ............................ ATACCCTTCTACGTTGACGCCTGGATTCAAAT 83737 28 100.0 32 ............................ AGCGCCGCATCGGCAATTTGCAAGCGGTGCAA 83797 28 100.0 32 ............................ AGTCCAAGCAAAATGGTCGCAGCCAATACACT 83857 28 100.0 33 ............................ AGCAGGTTGCGCTGGACCCATTCGGAGAACTCA 83918 28 100.0 32 ............................ TTACCCAGCGCATATGATGATGCTTTTGATGG 83978 28 100.0 32 ............................ GAGAAGCGAAGACAAAGCCGGTGCGACAGACA 84038 28 100.0 32 ............................ ACAAATATAGCCCCTTCGCTACGGAGGAGCAG 84098 28 100.0 33 ............................ GATGCCAGTCGCTACGCTTTCAAGCGCAATCTT 84159 28 100.0 32 ............................ ACCCAGTCGCAGTCGTTCATCGCGTAGATCTT 84219 28 100.0 32 ............................ AGGTGATAGGGCCCAGCACCGGAAGGTAACCT 84279 28 100.0 32 ............................ GTTCTGCGTGTTGATGCCGGCGCTTGCCGGCA 84339 28 100.0 32 ............................ GCTGACCAGGTGCGTGACGAAGTCGTCGACCA 84399 28 100.0 33 ............................ ACGACGAGGCCATGAAGCACATCCCGGAAGCAC 84460 28 100.0 32 ............................ TGAGCGAAGAGTGCCAGCACTGCTTGAGTGCG 84520 28 100.0 32 ............................ TGAGCCAACGCCGGGGACGAGCTGCACCCGTA 84580 28 100.0 32 ............................ TTCCAGGTACAGAGGATTTGGCTTGATGCTGT G [84593] 84641 28 100.0 32 ............................ ATGTCGGCGCGAGTCACCGCGGCGAGGTCTAC 84701 28 100.0 32 ............................ AGGCTGATGCGGGTGCGCACGGCTTTGCCAGA 84761 28 100.0 32 ............................ TTGTGATATCGGAAGCCAGGACGGAAGACGTG 84821 28 100.0 32 ............................ AGCCGCAGCTGGAACTGAACGGTGTCGCTGTC 84881 28 100.0 32 ............................ TCATAAAAACCACCAGTCGTCTTTGAGTAAAG 84941 28 100.0 32 ............................ GGACTGCAACGGTACGGCGCGGCACAGGATAT 85001 28 100.0 32 ............................ TATTTCAAGAACGGCGGCGCAGTTTTCGAGAA 85061 28 92.9 0 ......................G....C | ========== ====== ====== ====== ============================ ================================= ================== 60 28 99.9 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : CTCCAGCTCATTGGCGCTGAACAAGGGCGTGCCGCCCCCGCCGCAAAAGCCCACCATCACCCCGGCCTTGGCCAGCTCCCGCATCGCCGCCTGCGTCACCGAAGTGCCGGTGCCCAGCAGGATGCAGCTGGTGTTGGCGATGGGGATATTCCAATACAACGAAGCCTTGCCGGCATCGGTGACGTACTCCACCCGCCCGCCGTTGACCAGCACCCGGCAGTGCTGCAGGTAATAAAGATTGGCGCGCTTGGAATGCAGAATGGTCTTGAGATCGGACGGGGAAAAATCGGACATGACGATACCTTCGGGATGGAACTCGATGGCATATTTTGCCATGGGCATGAACGGCATGGCAGCCTGCGCGACAAACCCTTTTTTTCCGCCCCCTGTGGCTGACATTTAAAAACAATGACTTAGCGATGGCATGGAAATTTGGGTCAAAGCCGGAAGAATCGCTGCAAATGCCCACGCCATAAGGACTGTGGGCGGTGTAGACTCTA # Right flank : CACCAAAGCGAGGCAATTCAACTCGCTATGCACACCCAATGTTCTGAAAGCGAGCGCAGCAAGAATCGGGTCGCCCACAGGGTCGCGCCGCCATAGACTTCGGACATTTCAATAATGCGAAGGAGAACGGCATGGCTTGGCAACTGGAAACCCTGGACCCGGCTTTCGTCGAACGGGCACGACACAAAGGGATTGATGCGCTTGGCCAAGCCGTGCGGCGGATGACGGCCGCCGGCGGCGAACCTTTCCGCGACGCGCTGCGTCGCGCCATCCCGGGCGAAGAGCTGATCCTGGCGAGCTACAGCCCATTCCACCAAGTCGGGCCATACCGCGAATATGGGCCGGTTTTCCTGGCGGCAGGGCCACAGCCAGAGCCCCCGCCCGAACTATCATCACTACTGCGCCGCGTCGGCAGCAATCCCTACCTCGGCGACCGCATGGCGCTGCGCGCTTACGACAAGGAACAGACCATGCTGGAAGCCGTGCTGCTGCCAACGCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 95317-96668 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLRD010000009.1 Chromobacterium haemolyticum strain WJ-5 NODE_9_length_247986_cov_152.716848, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 95317 28 100.0 33 ............................ TCCGGACTCGCGATGGGTGAACCGATACCGGGT 95378 28 100.0 32 ............................ TCCACGGCGCGCATATTCTTGTCGCGCAACGC 95438 28 100.0 32 ............................ AATGGCGCGGCGCTGGCGCGCGAGCACTACGC 95498 28 100.0 32 ............................ GCCCGGACAATCTCTATAACCTGGACCTGGAT 95558 28 100.0 32 ............................ CAGCCGCGAGAGTTCAAACAGAATAGACCTTC 95618 28 100.0 32 ............................ TTGCCGCCGGCCTCCAGGCACTCACGAACGAA 95678 28 100.0 32 ............................ TCCTGCTCGGACACCGCCGCCGCTCCGTCGCT 95738 28 100.0 32 ............................ ATCGCGTCGGGGTCGCCCTGGACTGTCAGCCT 95798 28 100.0 32 ............................ CTCCAGGCGTCCCACACCCGCAAGCAGTCCAT 95858 28 100.0 32 ............................ TGGTCACTTCAGGCAGTCTGGTGATGAATTCC 95918 28 100.0 32 ............................ AGACGTGACCTTTGAGGAGGTGCACGTTGACA 95978 28 100.0 32 ............................ ACGCTGTAGCGGTCGAACGACAACAGCAGGCG 96038 28 100.0 32 ............................ TCGCAGTTGAGCGTCCATTGGAAATTGCCGGC 96098 28 100.0 33 ............................ ATGTCCGCCGCCGACCTCTGGGACGACCGCGGG 96159 28 100.0 33 ............................ AGTCCGGCATGCGCTGAACCCAGAACTGGACAT 96220 28 100.0 32 ............................ ATGCTGTGCACTAGGTGGGGAGAAATCCATGG 96280 28 100.0 33 ............................ CATCCACCACATGGACACCGAAGGTGGAGAGGG 96341 28 100.0 32 ............................ AAGACAACCCGGGGAGGGGCCGGGACCAACAC 96401 28 100.0 32 ............................ ATCCGTGGCCCAGTACTCGCCTGCCACATCCA 96461 28 100.0 32 ............................ AGAGCGCCGGGCTCGCGCATCCGATCCTGCGT 96521 28 100.0 32 ............................ GCACCGATGATCTCGCCGCGGAGGCCAGACAA 96581 28 100.0 32 ............................ GGTCTGTTGGGATGCCTCGGCGTCTTCTCCTG 96641 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 23 28 100.0 32 GTTCTCTGCCGGATGGGCAGCTTAGAAA # Left flank : CATGCCGCCTTGCAGCGGCTGATGGCCGGCGACTGGCTCAGCGGCATGCGCGACCACATCGCGCTGGCCGCCATCCAGCCGGTGCCGCCGCAGGCGGAGGCCTGGCAGGTACGGCGCAAGCAGGCCAAGACCAATCCGGACAAGGAACGCCGCCGGCTGGTACGGCGGCTGGGCATCAGCGCGGAAGAGGCCGCGCAGCGCTTCCCGGACAGCGCCGCCCGCCGGCTGACCCTGCCTTTCCTCATCCTCAACAGCGCCAGCACCGGCCAGCGCTATCAGCTGCACATCGAACAGCGCCCGGCCCCGGCCACCCACGGCGGCCGCTTCAACGCCTTCGGCCTCAGCCCCGACGCCACCGTGCCGTGGTTCTAACCCTTTTTTCATGCCCCGCCGCCAAACCTGTTAAATCAAGGGCTTGGCGCGGGGTGCGAGAAAAGGGTTTTTATTGGGAAAAGCGATGCTTTCCCCCGCTGGCGCGGGTTTGCGGGGGAAAGGCTCTA # Right flank : ATCTCAAGAGGTGAGTGGGGCCTGCCGGCTCTAGTTCACTGCCGGACAGGTAGTTCTCCACAACAAAATCAATGCTATATTAGGCATCTAAATTGACATTGACTAGGGAGAAATTATGGACTTGGTACTTGCCGATGTGGCCGTCAGCGTCACCGAGCTCAAGCGCAATTTTGCCGGCATCATGCGCGAGGCCGCAGGGCATCCGGTGGTGATCCTGAATCACAACCGCCCGGAGGCCTATCTTGTCCCTGCCGCCCAGTACGAACGCATGATGAGCCTGCTTGAAGACATTGAGGACACAAAGCTGGTGTTGGAACGTCGGCAGCAGCCCACTGTCAAGGTAGACCTGGATGAGCTATGAAATTGTCTTCCGGGTGGATGCGGAGAAGGAATGGCGAAAGTTGGACCCATCAATCCGACAGCAGTTTGCCAAGAAACTGAGAGAACGAGCCGAGCATCCGCACAACCCTGCCGCCAAGCTGCATGGCCTGGAAGGCTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTGCCGGATGGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCTGCCGGATGGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //