Array 1 18614-19435 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LYQA01000029.1 Staphylococcus epidermidis strain KED12 KED12_contig_36, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	====================================	=====================================	==================
     18614	    36	 100.0	    35	....................................	TTCATTATAATCAAATCCTTTTTCTTTTTTATTTG  	
     18685	    36	 100.0	    37	....................................	CACTATTCTTGATTACTTGATTAGTATTCAAGATAGT	
     18758	    36	 100.0	    36	....................................	AATATAAGCGTAAAAAGTATTGTCTTTATATTGACT 	
     18830	    36	 100.0	    36	....................................	TTCTGAAAGCCAACAATTATTTTAAATTCTTTTCGC 	
     18902	    36	 100.0	    37	....................................	CTTTAAGGTAACTGAAATTGATAACACTCTTCCAGAT	
     18975	    36	 100.0	    34	....................................	GGTGCCAACCTGTGCCCCCTAAATCATTTCTGTA   	
     19045	    36	 100.0	    35	....................................	CATTTCAATCATATCCTTTTTAATAATTTTTTTAT  	
     19116	    36	 100.0	    37	....................................	TGTTCGTCTATGCCGTCATAATGTAAATCACTTACTA	
     19189	    36	 100.0	    34	....................................	TTCAATAGCCCAATTAATAACATCTTTCTTCAGT   	
     19259	    36	 100.0	    35	....................................	TTAACTTCATTTTCACGACCTACTAATGGACCTTG  	
     19330	    36	  97.2	    35	...................................T	ACATCGTCAGCCATGTGGTTTGGTAAGTTTACAAG  	
     19401	    35	  86.1	     0	..........T.................G.-...GT	|                                    	
==========	======	======	======	====================================	=====================================	==================
        12	    36	  98.6	    36	GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC	                                     	       

# Left flank :   GCAAAAATGGATTTTCGTTTCTTATGATATGCAATTAATCCTCCAAAAAATTAAGCATAATGAAAATTGTAAGTTTCATGCGGTTCCTCATCTTAATTTCTATGAAATGAGGTACGACCTGAGGAGTAGGTTTACTGAGAAATAATGTATTTACGCTGGGGCTTCAAGTCCAATTTAGTTTTTACATTTCATACTTGCACATTATCAAACAAAATCAATTATTAAAATAGATGTTTAAGTATTTTTCTTCTTGTAGTGAGGGAACGTCTAATTTTTATTCGAAATATAAAAAGAAATGAAAGGTTAAATTAATATTAATTTTATTAAATGAATAGGCTAAACCATCTTAAATGTAGTATACTATTAATATAAATGTAATTATTATAAAATTTGTCAAAAAAAGTGACATATCCTATAATCTTGTACTAGTGATTGTCATATTTTTTGACAGCAAAAATGATGCTTGAAATATAGTTGTGATGGCATTTGTTAAAGTATCT
# Right flank :  TGTAAATCTAACAACACTCTAAAAAATTGTAGATTTTGAATAAAATACGCATTGATTAATTTCTAGGGGATGGAAAAATGAAAGATGTTATTTATGTAGAAAATCATTACTTTGTTACTGCGAAGGAAAATAGCATTAAATTTAGAAATGTCATAGATAAAAGTGAAAAATTTTATTTGTTTGAAGAAATTGAAGCTATTATTTTTGATCATTATAAAAGCTATTTTTCACATAAATTGGTAATTAAATGTATAGAAAATGATATTGCGATTATATTTTGTGACAAAAAGCATTCTCCAGTTACACAGCTCATTTCTTCATATGGCATGGTTAATCGTCTTAAAAGAATTCAAAGTCAATTTCAGTTATCGGGAAGAACAAAAGATAGAATTTGGAAAAAGATTGTTGTAAATAAAATTTTTAACCAAACACGATGTCTTGAAAATAATTTACATAATGAAAATGTTAAGCTGATGTTAGGTTTTGCAAAAGAAGTGAGT

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [15,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-7.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : III-A [Matched known repeat from this family],   
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