Array 1 43810-43328 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOHQ01000002.1 Streptomyces sp. NRRL F-5917 contig2.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 43809 29 100.0 36 ............................. CAGAGGGCGCGAGCGGCTACCGCCGCACCATCGCGG 43744 29 100.0 36 ............................. GGTGGATCGAGTGGGGGACTGCGGGCCCCGGACTCC 43679 29 100.0 36 ............................. ATGCAGAGGGCGTAGTGCGCGGGTTCCATGCCGATG 43614 29 100.0 36 ............................. ATGTACCGCGTCGTCTCGCTGAATGGCGGGACGCCC 43549 29 100.0 35 ............................. GCGTTCGGGGCGAGTGCCGGCGGTCGGAACCGGTG 43485 29 100.0 35 ............................. TGGAGCTGGCCGCGCTGGGCCGGTAACGGGCGGTC 43421 29 100.0 36 ............................. ACAGGCCCTTGGAGACGCCGCCCGCCACCGCGCGGG 43356 29 89.7 0 ..........C...........C.A.... | ========== ====== ====== ====== ============================= ==================================== ================== 8 29 98.7 36 GTCGTCATCAACCCTGGTGGGTTCGCAAC # Left flank : AACGGCCGCAAGCGATGACCACGCCAGCCCTCGTCATGCAACGCCCGGGCCAACTCCGCATCCGCTGCCCCGAGGACCTCATACGCCACACCCCGGGCAGCGCCGTGTACGTCCCGCCAGGCCATCTGCGGCGCATCGGCAGCAACATCCACCCTGATCCGCACCTTCTCCCCTCCCCCACAAGGCCCTTCGAACACCCGGTCCATGCTCCGGCACTGTACGCACCTGATCCCGATTTTCGGGTGAATACGAAAATATGGGCCCCTGCTGCCAGTTCGCGTGCTATATGCACCCCGTGGCCGACGGCCTTGCGCCATGGGAGGGAACCTAACGTCTCCCACTGACACCGCTTATCCTGGCGGGCGGACGGAACGATGAGAGTTGCGCCGCGCCTGCCGACCGGCCGCCTGACCTGCGTGTGTGCACTACCGGCGGGTCGCTGCAGAACAGGCCTTGTGAAGCCCGCCGAACCGCACGATAACCAGCGCCTTTACCCTGGG # Right flank : ACCCGAGTCGGTCGGCCTCGACGTGGCTGGAGTTCTGGTCGTCCTCACGGAGGGAGTCGGCCGCCGGAAGAGACCAGTGCGGGCGACGCCGCCCGAGCGGACTGGGAGGCTCCGGACATGCTTGCCGCGCCCGCGAGGTGAGGACCGCGGCTCTCAGCAGTCCCTCCCGCCCTCGCAGGACAGCGCGGGGCGCCAGCCGGCACGGCCGGTCTACGGCGTGCCGCTGGAGTCGGGTGGGGCCGGTCGGGTGAGGCGGGTGAGGTGGTCGCGGACCTCGCGTGCCTGGGGGTGTCGGCGGTAGGGGGCGAGGGAGCGCCGCAGGGCGGTGAGTGCTGTCGTGGTCCGGCGGGAGGACGTGTGCGGGTAGTGCGCGGCGGCCTGTCGGCACTGGTCCAGCGCGGCCTCCAGTTGTCCGAGGTCCAGCAGCGTCCTGGCCAGCTGCGCGTGGGTGAGCAGGCGGGAGACGTGGTGGGTGGGCGGGCGTGCGGCCAGTGAGTCCT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCAACCCTGGTGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.30,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 52382-52933 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOHQ01000002.1 Streptomyces sp. NRRL F-5917 contig2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 52382 29 100.0 37 ............................. TGTGGCAGGCGCCCGACTCGGACGACGGCAAGGGCCA 52448 29 100.0 35 ............................. GTGCAGATCGGGCGGTTGGGGTTGCTGTCAGGTGA 52512 29 100.0 35 ............................. TCCAGCGGAGTGCGCACGTTCGCGCCCGCTGTCAC 52576 29 100.0 38 ............................. CCGAGGCGCTGTGCGGTGATCTGACGGCCGTGCAGCCC 52643 29 100.0 37 ............................. AGTAAGGGTCGGCACCAAAGTCTTGCCCCTTACGCGG 52709 29 100.0 36 ............................. GCCGGTGCCGTTGCGCTCGGCGGCCATCGTGCCGCC 52774 29 100.0 37 ............................. CCATCCTGTGCGACACGATGCGCGAGGAGGTCGACAT 52840 29 100.0 36 ............................. GGGTGGACCAGGGCGACGGCGATCATGTCGGGGCCG 52905 29 86.2 0 ...................C.CG.C.... | ========== ====== ====== ====== ============================= ====================================== ================== 9 29 98.5 36 GCCGTCATCAGCCCTGGAGGGTTCGCAAC # Left flank : GAAGAACTCGCCACGACCATCTACCACCGTGCCCTCAAGCGAAAGGTCACCTACGAAGAACTCATCCACCTCGAGGCGCTGAAAATCGTACGTCTATGCCTCGAAGGAACCCCCTACAAACCCTTCCGACCCTGGTGGTGACCCCTCATATTCGTCATCCTTGTTTACGACACAGCCACCGAACGCAACCCCAAGGTCCTCAAAACCTGCCGCAAATACCTCCACTGGACCCAACGCAGCGTCTTCCAGGGCGAACTCACCAAGGCCCAGTACCGAGCCCTTATGACGTTGCTGAAAGACACCATCGACCCCGCCTACGACAGCATCGTCACCTACACCAGCCGATCACCCGACCTCATCGAAACAGCCACCCTCGGCACACACCTCGGAGGCCCCGGCGACATCCTCTGACCAGCACGTTTGCACTACCGCCGAGTCGCCGCAGAACGCACCGGAACAGCTCGACGGAATTGGCCCCTGACCAGGTGCTTTACTCTCGG # Right flank : CGTGAACCCGGCCGCGGTCTCGACAGGTGTCTGCGGCCCTCGCTTGCCGTCAGCAACGCGCAAGGGTTGCTCGCGGCGGGCCGGCGGCTCCAGACACGGTGCCGCCGCGCCCCGTTCCCGGCCCACTGAGCAGCAGGCCGGAACAGGGCGCGGCGGGGTCCGCGTATCAGATGTCGCGGAACGTTTCGATCTGCGCGCCGACCTCGTTGAGGCGCTCCGCCAGGTCCTCGTAGCCGCGGTTGATGACGTACACGTTGCGCAGCACCGAGGTGCCCTCGGCCGCCAGCATGGCGAGCAGGACGACGACGGCGGGGCGGAGGGCGGGCGGGCACATCATCTCGGCCGCGCGCCAGCGGGTCGGGCCCTCGACCAGGACGCGGTGCGGGTCGAGCAGCTGGAGCCTGCCGCCGAGGCGGTTGAGGTCCGTCAGATAGATGGCCCGGTTGTCGTAGACCCAGTCGTGGATGAGGGTCTTGCCCTGGGCGGAGGCGGCGATGGCC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTCATCAGCCCTGGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 51618-51347 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOHQ01000018.1 Streptomyces sp. NRRL F-5917 contig18.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 51617 28 100.0 33 ............................ CGCTTCCTGCTCTCGCTGCGGCGCTGGGTGAGG 51556 28 100.0 33 ............................ TCCGGGAGGCGGGCCGGGACCCGCGGCGGGTAC 51495 28 100.0 33 ............................ CGCCTGATCGGCGCGCGTGGGTGATCCTTGACC 51434 28 96.4 33 .........................C.. CAGGTTCCAGACGTCCGCGTCGGTGATGGTGAA 51373 27 67.9 0 ....CG.....C.C...ATA..-..C.. | ========== ====== ====== ====== ============================ ================================= ================== 5 28 92.9 33 GTGCTCCCCGCACGCGCGGGGTTGGTCC # Left flank : TTCGGCGCAGGCGGGGCGGATCGGCGTCCGGGGCTGCCTTGTCCAACCCGCAGGCGCCTCCGCGACGTGACGTCCGACGCGCATACCCATGGGTTGCCGCGCCAGGCGAAACGGAACGCGTCTCGTTCGCTCCTACCGGCCGAATGCGGCCAGCTCCACGAGCAGCTGCGCCATAGCCACCAGCAGCGCCCACCGGCACCAGTCCACACGGCGTCGGTCCGCGCCCAGCTACCCACCTCCATGATCCGTTCCCGGGACCGTAGAACGGGGCGCGAGGTACCCGGAGCGGAGTACCCACAGACAGGCCGGATCGTCATACCGGAGGCTCACCCTTTGGATGAAGGGCTCGTCGGACTGGAGGCTGACCAGCCCTCGCAGTGGCCCAGCTGACACCCTTCGGCAGGGTTTCGACTCCTAATGGGAGAACGCCCGGAAGGTCCGAGTCGTGGGAAGTGGTTAGAATCGGCCCTCGACTGGCGAAACGCTGCTGGTCAGCTCCT # Right flank : CGCCGGCACCGCTCGGCGGGGCCGTCCATCCACAACAGTCAGCACGGTGGATAGGAGCACTCCCGAGCCTCCCACCACATACGGCCAGCCCCCGGAAACACGAGAACGCCCCGCCACCGACGATGGCGGGGCGCCTCCACACCAGGAGGTGCCGCTACCGTGCAGCGAGTTCGTACAGCGTCAGCACCAGCGCAGCCAGCCCGGTCAGCGCAGCGACCGACGGAAGAGGCCACCGGGCACGCTTCAGGTCCTCGACAGCGGCCCGCAGGTCGGTGATGTCCTGATCGTGGTCCTCGCGCAGCCGCCGCACGTCCTCCTCGGCATGGTCGGTGCGCTCCAGCACCACGTCCAGGCGCCTGCCCAGCCGCGCGAAACCTGCCTCGCTCGCGATCGCTTCTCAGCTGTCCTGAACAGCACGTGCACGTAGGCGCTCGTCGCCGCTGACGAAGGAGATGACCGACGCCGCTCCCCGGTGGGCGCGTGCACCGAGCACGGTTCGG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACGCGCGGGGTTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACACGCGGGGTTGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 122307-122877 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOHQ01000026.1 Streptomyces sp. NRRL F-5917 contig26.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 122307 28 100.0 33 ............................ GCGCCGCTACGGGCGGCCGTACCGGGTCGGGAG 122368 28 100.0 33 ............................ CGCCCGGGGTGGCCGTGACCTGGCACGTAACGG 122429 28 100.0 33 ............................ CGCCACCAAGGGGAACACCGTCAAGAGAAGCCA 122490 28 100.0 33 ............................ GGGCGGCGGGGCCTGTTTGCGTTCGGGGGAGGT 122551 28 100.0 33 ............................ GTCATTCGCCGCGCTCTCATGGACAGGTACGAA 122612 28 100.0 33 ............................ CGCGTCAGACGTGTCAGTGCAGGTGCCGACGCG 122673 28 100.0 33 ............................ GCAGGTGGCCCGTACCGCCTGACCTCGGACGAA 122734 28 100.0 28 ............................ GCAGGTGGTCCTCGGCCTTGGGCCCGAG 122790 28 92.9 33 ........................CT.. CGCAGCCGACCCCGTGCGCCTGGCCGTGCGTCT 122851 27 85.7 0 ...........A...A......-C.... | ========== ====== ====== ====== ============================ ================================= ================== 10 28 97.9 33 GTCGACCCCGCGCCCGCGGGGATGGACC # Left flank : GCAGCGGCTGCTACTGGCTGCTGCACGCCGACAGCGTCCGGGAAGACGGCGAGTGGACCGCCTACGAATGGTGGCCCGGCGACGGCGACGACCCCGAACCGTACGACGACTTCGCCACCCTGGTACGGGAAGCGGCGAACACGTAGCGACCCCGGCCGGGCCGCGAAGCCCTGGCGGGGTGCCGGCCCACCACGGGGAACCCCGCCGTCGGAGTCCCGGAACCATGGACACGAGCACTCTCGGAGCTCACGGGCTGATTACCGGGCGCTCAAGGTAACCACCAATTGCGGCCTCCCACCGCGCCTACACCATTGGCTTGAGCTCGTTGCAGCGTGCTTGGCCTGTGGCGACCGGCCGAAACTGGGGCAGCGTGAGCACAGGGGTAACGTGAGAGTCCATTCTGCGTTGACCGGCTCGCGAACCGGCACGGGAGGGCCGGACTCGTAAACGAACCGAAGGAAGACCCGCCCCCGCTGACGCAAACGCTATGGTCAGCAAGT # Right flank : CCATTACCGTTCCACCTCGAAGCTGACACACGGGTGCGCTCGCTGCTGATCGGAAACAGCAGCTCAGCCCGGGAGCCGGTCAGCGTTGTCAGTGCCGCTGTTTACTCTCCCTGTTGGCGAGTGGGGAAGGGAGTAGTGGCTGTGGAGTGGTCGGGAGCCTCTGCGGAGATTGGGGTTTTGTGGGGTAAGTCGAGGGAGCGGGCCGGCGGGCGGATGAACCTGCTGATGTCGCACCTTTTTGATACGAGTGCTGTGGCCGAGTTGATGTGGGACCGGTTTCTTGCCCCCTCGACGCGGGAGGCCCTGGATCGTGTGGCGGGGGGTGCAGGGCAGGGGCGGTCGCTGCTGGCTTGGTTGTGCGGGGTGCACGATTGGGGAAAGGCCACACCGGCTCACCAGCGTCTGTGGCCTGAGGGCGCGGAACTGGTGCAGAAGTCGGGTTTGACCTGGCGGGAGCCACTGGCGGCGGCAGCTGCCAGGCGAAGCCGCTGGCGCCATGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCGCCCGCGGGGATGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGACCCCGCACCCGCGGGGATGGTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 132510-134128 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOHQ01000026.1 Streptomyces sp. NRRL F-5917 contig26.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 132510 30 96.7 31 ............................T. GAGGAGGGGTTGTCGCAGTGCGGAGGAAAGA 132571 30 100.0 31 .............................. AGTGGCCGCGGTTGAACAGCGTGATCCGCCA 132632 30 93.3 31 ............................GC AGGCCGGGCGCGAGAACCTCGCGACGCGCCG 132693 30 93.3 31 ............................AT GGCACCCACTGTGGCCCCCACCTGCGGAGTG 132754 30 96.7 31 .............................T CGCGGCACGAGCAGGCATCAGCCCGGAAACT 132815 30 93.3 31 ............................GC GTTCGCCTCGCTCGGGACGGCCGCGCGGACC 132876 30 96.7 31 .............................T GCCATGGAGGGATGCCGAGGTATTCCGGGAA 132937 30 100.0 31 .............................. CGTCCCGGAGGGCCTCCAGGATGGGCGCCAC 132998 30 93.3 31 ............................GC CCTAGCGCGGGAGCTGGACCGAATCGTTCGG 133059 30 93.3 31 ............................GT CGGCGACGGACCGCATGGTCGCCGCGGTCGC 133120 30 96.7 31 ............................G. TCACCAGCCGGTCATCGACACCCAGGCCGAA 133181 30 96.7 31 ............................G. GCGTCCGCGGCCTCTGGAACACCGCCGCCAA 133242 30 96.7 31 ............................G. CGCTCAGGACGCCGAGGAACGCGGACTGGAT 133303 30 96.7 31 ............................G. GATACGCCTGCCCATGTACGCGTTCTCTCGC 133364 30 100.0 31 .............................. GGGGGCAGGTGCACCCAGATGTGCCTTGCCG 133425 30 100.0 31 .............................. GTCCGGACCTCCGGACCCAGATCCCCGTCCT 133486 30 100.0 31 .............................. TGGGCACGCCCGCCAGCTGGCCGACGACGTC 133547 30 93.3 31 ............................GT ATGGGTTGCAGTTCACCGCCTTCGACCCCTG 133608 30 93.3 31 ...........A................G. TGGTCACGGTCGGCATTGCCATCCTCGTAGT 133669 30 90.0 31 .............A..............TT CACCAGCCGAGCCGAGGCCGCTGAGGCGCTG 133730 30 96.7 31 .............................A CCCCGATGACGGTGGGCATGGCGCTGACGAT 133791 30 96.7 31 .............................A TACGGGCGCAGCGCTGTTCGCAGCCCGCGCC 133852 30 96.7 31 ....................A......... ATCCCCTCACTGACCGCTACGTGAGGGGATC 133913 30 86.7 31 .......T.....C..............TC GCGACAGGTCCGGTTCGACGGGGATGTTGAT 133974 30 93.3 30 .....T.......C................ CTCGTTCTTCGCGATGGAGCGGACCTCCCC G [134002] 134035 30 83.3 31 ....T........CC.............GA GGTCCATGCGCGTCGCGCCCGCACGGGGCGT A [134045] 134097 30 86.7 0 .............C........C...A..A | AA [134118] ========== ====== ====== ====== ============================== =============================== ================== 27 30 94.8 31 GTGGACCCCGCGCGTGCGGGGATGGACCCG # Left flank : GACGGCATCGACATCGAAGAGGCCGAAGCACACCTGCTGTGGGACGAACATCTCGGAGCCGTCCCCGGAGGCACGAACTGGTCGTCGCCCACCTCTGAACCGTCCGAGTTCGGCATGGCCGACGAACACATCGCCGTCATCGGCCCCGAACTCGACGAGAACGGACCGGCCCGATGACGGTCATCCTCCTGATCGCCGCCCCCGAAGGCCTACGCGGCCACCTGACCCGCTGGATGGTCGAAATCAGTGCCGGCGTCTTCGTGGGCAATCCCAGCCGCCGCATCCGCGACCGCCTGTGGGAGCTACTGGCCACCCGCGTGGGAGACGGTCAAGCCGTCATGGTCGAACCAGCCACGAACGAACAAGGCTGGGCGGTCCGCACGGCCGGCCGCGACCGCTGGTGCCCCGTCGACTTCGACGGCCTCATCCTCTCCGCCCGCCCCCGAACCCCACCGAATGAAAACACCCCCACAGCGCGATGATTCCCCTGCTCAGCAAGT # Right flank : ACGAGTCATGGCGCAGTGCGGCGGGGCGTGATCACTGACGTACTCGTGATGTAGGTCAAGGATTCGCCCTCTTATGGGCTGTCACGCCAGAACCTCTCGCCATCAGCGACAGCTCACCGTCTCAGCGTGGCCGGGAGGTCCAGTTGTCCGTGGTGTGGGGCCCTGACGGTGACCAGGTCACCAGGCAGGCTCGGCAGGAGCGCCCCAGGGACTTCCAGCTCTGATCACAGGGACTTCTGAGGGACTTTCCGCCGTACAGAAGGGCAAGCCCGTGACAGAGCTGAAAGACGCGAATCACCTGGTCAGAGTAGGTGTGCTCAGCACTCGATCACGTTCACCGCGAGCCCGCCCCGCGCCGTCTCCTTGTATTTGACCTTCATGTCGGCGCCCGTCTCGCGCATGGTCTTGATGGCCTTGTCGAGGGAGACGTGGTGGCGGCCGTCGCCGCGGAGGGACATGCGGGCGGCGGTGACGGCCTTGACCGCCGCCATGCCGTTCCG # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGACCCCGCGCGTGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //