Array 1 254101-255417 **** Predicted by CRISPRDetect 2.4 *** >NZ_WDOI01000004.1 Bifidobacterium bifidum strain BIOML-A6 scaffold4_size358632, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 254101 36 100.0 28 .................................... GTGCCGGGCACCTCGCGGTGCAGCACGA 254165 36 100.0 28 .................................... ACAAACACATTCGTTCGCCCTTGCGGTT 254229 36 100.0 28 .................................... CAATAGGCGACCGTACGGACGCAATCAG 254293 36 100.0 28 .................................... AAGGTGTTCGAGCAGCATTACGTCTATA 254357 36 100.0 28 .................................... GTTTCATAACGGTAATCGGCGCGTTTTT 254421 36 100.0 28 .................................... AGATAAAGCGCCTACACGGGATGTCCAC 254485 36 100.0 29 .................................... CAACGTTAGCACATGGCTACGAAGTACGA 254550 36 100.0 28 .................................... CTTTGCGGCTGGCTTCCATGCTGCATTT 254614 36 100.0 28 .................................... TTGTGTGGTGTATTTGTATTTGTATGTC 254678 36 100.0 28 .................................... CCATTTCACCGCCTGATATTTGCTTGAT 254742 36 100.0 28 .................................... TTAACGATGTTGTGAGCATGATCGGTAG 254806 36 100.0 28 .................................... TCATCCATGCGACACCGTTGACCATGAC 254870 36 100.0 28 .................................... AATAGTGATATCTTGTCTGGCAGTCCGA 254934 36 100.0 28 .................................... CCAAGGACGCGACGTTATCCACGACAAC 254998 36 100.0 28 .................................... TCAACTCGGTCAACCATTATCTGCATGT 255062 36 100.0 28 .................................... ACCGCTTCGACATCACCGTCAACGGCAC 255126 36 100.0 28 .................................... TCGGCAACCAGTGGGCGCTGACCCTGAA 255190 36 100.0 28 .................................... ATGGACTGACTATATCAATACAACCACG 255254 36 100.0 28 .................................... TTCCTGCGACGGCGCTGGCGCGTCGTCT 255318 36 100.0 28 .................................... CCGTTTGGAAACCCTCGTGTGCGAAACT 255382 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 21 36 100.0 29 CAAGTTTATCAAGAAGGGTAGAAGCTAATTCCCAGT # Left flank : AGTTTAATTCATCCGGTTTGACGATACCAAGTTCGGTAAGCGATTTCGCGCAACAGTTTGGTCTGTACTGTGAGAAGAGGATCGATTCATTGGTGGTACCGGAATATCAGGGTCCTTATGAAAAAAGATGAGGACAGTGGTGGCATGTGGTGCTTGGTGATGTTCGATTTACCGGTGAAAACGAAATCGCAACGCCGTGAGGCAACGAAGTTTAGGAACATGCTTTTGGATATGGGCTATAGCATGGTGCAGTATTCCGTATACGTAAGATACACACCGACTCAGGCAGGCAACAGATCGACAGTAATCGCGATAAAGGAGAATCTTCCAGCTGAAGGCATCATACGGGTCCTCCATATCGGTGACCATCAATGGTCGACCTCATTGCGTTTTTCCAGCTCGAAACGGGTCACAGTCGATGAGACGCCGGATTATTTTACGCTTTTTTGAATAGAAGAAATCTAATAAAAGGCGGAAAATAGCCCTTCTTGATAAGAATA # Right flank : TTTATTTATCGTGGTTGGCAGCATCTCTCGGTAGTGCCCGAAAGGTTGCGCACTTTGGATCATGCCCGCCCATGGCGCGATGACCGGTTCGCTTCCTGCAGATTGTCACCGAGCCGGGACATGTCGAGGTAACGCCGGTTGGACCATTCGTTCGCGGTGACGTACCTGATGCGCGCACAGACGAGCATGAGCGCGCCGTTCCCGTCCGGGAAGCTTCCCACGACGCGAGTGCGCCGCCTGATCTCGCGTTTGAGCCGTTCGATCATGTTGTTCTATTCTTCCCGCCTATCTTTTTCTTGTGGGGGCGTTGGAAAACCGCCGTTTTCGCGGGCCGGTCGCGCTGGTGGTCTGACTTGTGGTGCAACTATGGCGCGACTCGGGCCGCGATATGGTTCGGGAAGGTTTTCGCTTCGCGCAACCTCGTCGCGGGTGGAGGGTGATGGGCTGGCGGGGACGGGCGCAGCGCCCATGGTGTCGTTCCCCGTGTGTGCTCCGCGCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTTTATCAAGAAGGGTAGAAGCTAATTCCCAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //