Array 1 8527-7196 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPDU01000049.1 Leptospira adleri strain FH2-B-D1 contig_49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 8526 36 100.0 35 .................................... AAAAGAAATATGACTCTCCGCTAAAATAATCATAA 8455 36 100.0 36 .................................... GAGAGGAAATTGAAGTCCCTATTGCTGATCTAAAAG 8383 36 100.0 37 .................................... ATCGTATTCCGAACAGCGTCCGAGTTTACTTTTGGTT 8310 36 100.0 35 .................................... ATGCGATGCATGCTGTTGCTCCCCCTCCAGAATTG 8239 36 100.0 37 .................................... TATAAATGTCACAAGAAACACTATCATCACGATCATC 8166 36 100.0 33 .................................... TTCTAATGTAACAAGTCCTATTGAAAGTCGTAA 8097 36 100.0 38 .................................... TAAGATTCATTGATAGTCATTTCTTCCCGGACGAAAAT 8023 36 100.0 36 .................................... ACTATGAACAGTAATTCCTGTAGAAACATGCTCTAT 7951 36 100.0 34 .................................... CAGCAACTCCACCTCGTTCCATAAAAAGCTCAGC 7881 36 100.0 37 .................................... TATAAACCAACACAACAAGAATTAGGTTGACAAATTA 7808 36 100.0 38 .................................... ATTGATGAGATATCAGATCTGGTATCTGTGATTTCCTC 7734 36 100.0 36 .................................... AACGCAATTAAGGTTTCTTATGCAACCAATCAAAAA 7662 36 100.0 35 .................................... ACACCACATTCCTACAACTGCGGTTTCATTTTTGG 7591 36 100.0 34 .................................... AATTTCTGCAATCCAAATTCCGTTCTGGCCGGTT 7521 36 100.0 36 .................................... AACGAAACTAAACCGCGCCGTGAACAATATATCACG 7449 36 100.0 35 .................................... TCCATACGCATAGCCAAGAATCGCATCCTTGATGA 7378 36 100.0 36 .................................... TCACTCGGGTTCCATTTCTTGTCTTCTTTTTCTTCG 7306 36 100.0 37 .................................... GTTCGCGAGTTTTGCAAGAGTTCGGGTCGGTCCCATG 7233 36 94.4 0 ...............................G..T. | TT [7202] ========== ====== ====== ====== ==================================== ====================================== ================== 19 36 99.7 36 CTGAACTTAACTTTGATGCCGTAAGGCGTTGAGCAC # Left flank : AAATTGGCAAAAGTGACTGAAAAAGAAGATGATGTATTTTACCTGACTCTTTGTAGCAAATGTGCCTCGGGGGCCCATACCCAAGAGAAAAAATCTGCATGGCCAGAGGCACCCAAAACACTGAAAATTCTATAATTCAAGGACCTCTTGAGGGCATAGACATAATTCTCTTTAAAAAACGAAACCAGATATCTCCAACCTGTGTTTAGTTCCGATAAATTTCAATTTTCACTGGAATTCAGGAATAGTCTCAATCCGGTAGATTCACCAATGTTTATTTTCTTCCTTGCTAAAATTCAGATTAAATTAATAATCGGAAATGCGTTAAAACATGCTTGAATCTCAAAATCTGATGAGAAACGCTTTTTAGAAGCGAAATTTCAATGTATAGAAAACCTAAATATGAAAAATAGTCCTAGAATATTAGATGCATGTTTCCCCTTTAAAAATCCCTCCGAACCTCCAATCTCTCCTCGTAAAAGCCATACAAATAAAATGCT # Right flank : CTCCTCTTCATGTCTATAACTGGCCTACGTGCAAAGGAAATCGTTGGTGATAAATTCTCTGATCTACTTAAAGGTCCTTCAGACGAAACGTTGCTGAAATATCGTAAGAAAGGAGGAAAGATCGGATTCGCTGTGTTACCGAAAGATTTAGTCGAGATAATAAAAGACTACCATTCGAAGTTTCTAATTAAATCATATGTGTAGTGATGGTATTCACAAAGATCTTTTAAAAGTAATCAAAGAGTATCATTCTGAATTTCAAATCAAGTCTGATTATTTCTTTCATACGTTGATAAAGCGAAATCAAGAAAACAAAAGCCCACTATCAAAACGTGGTTTACAGTTCATAATATCTGGATGGGACGTTAAGAAATGCCAGGGTAGAAATATTCATTGCCACGCACTTCGACATACTGTGGGAATAAGACTCTTAGCTGAGGCCGGTTCAATAGCCACTCAAAAGGTTTTAGGACATTCCTCTCCAGTTACTACAAGTAAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAACTTAACTTTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //