Array 1 169983-168363 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANDA01000105.1 Streptococcus agalactiae CCUG 28551 ctg120004390401, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 169982 36 100.0 30 .................................... GAATTTATATGGCTTCCACTATCGCATTTC 169916 36 100.0 30 .................................... CTTCGGTGTAGCGCCTAAGAAAATGATGTT 169850 36 100.0 30 .................................... AAATTTAATTTAATAATGGGAGAATTACTA 169784 36 100.0 30 .................................... AGGCAAAAGTTACATACTTATCAGCATTAG 169718 36 100.0 30 .................................... TTTTTATTGTTTATTAATTCTAAATTAATG 169652 36 100.0 30 .................................... TTTGTCATCTTATGGTGTGACCTAACCAAC 169586 36 100.0 30 .................................... AATAGGGCTAGTGCGACACTCTCGAGCTTA 169520 36 100.0 30 .................................... TCTTAATTTAGAACCTTTTTTACTTCCTTT 169454 36 100.0 30 .................................... TCTTAATTTAGAACCTTTTTTACTTCCTTT 169388 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 169322 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 169256 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 169190 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 169124 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 169058 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 168992 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 168926 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 168860 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 168794 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 168728 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 168662 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 168596 36 100.0 30 .................................... CAAATTACAGTTTCGACTGATTATGGAAAT 168530 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 168464 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 168398 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //