Array 1 48162-48673 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLJV01000014.1 Pseudomonas yangonensis strain MY63 MY63_contig_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 48162 28 82.1 32 T.........TAT.C............. TCTATCCCCATTTCGATTCCTGGGATGCCGCA TG,G [48165,48168] 48225 28 100.0 33 ............................ CTGCACCCGATGGACCGTGCGGCCGTGACCTTG 48286 28 100.0 32 ............................ AGCACCGGAGCGACAACGGCGAAGTGCCCGCC 48346 28 100.0 32 ............................ AGTTGCTGGCCGCGCCGTACGCGCCGTTGCGC 48406 28 100.0 32 ............................ GCCGAGCGGCTGCTCGCTGGCGTATCGCAGGC 48466 28 100.0 32 ............................ GTCACCGTCAATCGTTGATCTATCGCCAGAAA 48526 28 100.0 32 ............................ TGGCTCAAGCTGGTCCCGGCCTGGGCCTGGCC 48586 28 100.0 32 ............................ TGCACCCAGCGGCGCCCGACGTTGACGGTGAA 48646 28 78.6 0 .............C.......C.G.GCC | ========== ====== ====== ====== ============================ ================================= ================== 9 28 95.6 32 CTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : GAAGCACTGCAGCAAGGGCGGGCCGATGAAGTGCTCCAGCGCGGTCAGATCCGGCTCATCGATCCCCAACTTAGCTAGGGCGTACTGCACCGAACGGGTGATGCCCTCGCGCGGGTCGGTGAGGGTGCCGTCGAGGTCGAAAAGGATGGTGGAGTGATGCATGAGGCTTCAGGCTTCGGCAGTTCGGGGGGCACACAGCATAAGGCAATTGCCGGCGCCACCCAACGCCGCGCCATCCGAGCGCGGACCGTGCCAAAGCCGGGCATGTCGCTGTCACCCGATTCACAAGCGGGCACGCCGGCAAAAACACCGCGACGAAATTGCTGAGCTGCCTATTCGGCAGTGGAGGTTAAGCCCTTGCAGTACTACCTGGAGTTTTATTTCTGAGCTGCCTATTCGGCAGTGAAGTTCAGCGGTGTTATGAGCCGCGCTCGCGAGCCTTTCTGAGCTGCCTATTCGGCAGTGAAGCAGAGTCGCGCTGTACACCGGGAATATCTCTA # Right flank : CTCACACACCCAGCGCGCGAAACATCACATAGCAATCCACCAACCCATGCCTGGCGTGACGGTAGACCTTGGGTAAGGTGCCGACTATCTCGAAACCGTGCTTCTGCCATAGCGCCACGGCCACCGTGTTGGTGGCCACCACGCTGTTGAACTGCATGGCGCTGAAATCCAGTTCGCGCGCCACTTCCAGCGAATGGGCGCAGAGCCGGCCGGCGATGCCGCGACCGCGTGCAGCCGGAGCGGTCATATAGCCGCAGTTGCACACATGGTCGCCGGGACCTGCGGCATTGGCCTTGATGTAGTAGGTGCCGAGAATCTGCCCATCCTGTTCGGCGACGAAGGTGGCGCGCGGCAGTTCGACCCAGAGTTTCCAGGCCGTGTCGCGATCCATGTCGGGGTCGAAGGCGTAGGTTTCCTGCGCCTGCACCACGTCACGGATGATCGGCCAGACCTGGTCGAAATCGGCCACCTCGATGGGGCGGATGATCAGTTCGCCACTC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //