Array 1 151472-151169 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB932386.1 Enterococcus faecalis EnGen0081 strain 7330259-5 acsSh-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================== ================== 151471 37 100.0 29 ..................................... CATGTTTCGTTATGTATGAATTTAAAACA 151405 37 100.0 29 ..................................... ACAAACCTTTTTTGGATTTGAAGGCACGT 151339 37 100.0 29 ..................................... CTGTGGGGCTTGCTACTTTTCCGGCGCTG 151273 37 100.0 31 ..................................... GCGTGTTAGGAGGAGAAAACGAATGAGCAGT 151205 37 97.3 0 ....................................C | ========== ====== ====== ====== ===================================== =============================== ================== 5 37 99.5 30 GTTTTGGTACCATTCTAAACAACATGACTCTAAAACA # Left flank : ATTTAACTAATCGTACTCTCTATTCGTAAAGTAATAAATAACGTGACTCTAAAATTAAATAATTTCGTAATCGCATCACTTGCTCTAGCAAAGCTTTAATTCGTTACTTATATTTTTTATATAATAACCATATTTATACATATCAATGATATTTTTACATCAATCATATCGTATTTGCGAAAACTAAACAACATGACTCTAAAACGTTCTACATATGTAATGAATGCTCATTAGAGATTTGGTACCATTCTAAACAACATGACTCTAAAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCATTCTAAACAACATGACTCTAAAACGCGCTGTTTGCTCTGTCACGTCTTTTCTAA # Right flank : TCGGAGAATTATTTTTTCTCCAAAGTTCCGTACTCGCATCACTTATCCATAGCTAGATTTCAGTTTAGAATGAACCACTAATCAATAACAATTTAAGCTTTTTCATAACTCAAATAAAAGTTTTCGTCCAAAATATATTGGAATCTGTTCTGGACCACCCTTTGTTCTAAAAACAGGACATCCACATTATTTAAAGAGATATATTCTACCACTTGTTGCACTTCATCCTCTGTCAAATACGTACACGCATTAATAAAAATCAATAATTTTTTCTTTGATAAATAACGATGTACTTGTGTAATTTCCATAACTTTTTCAAAAATCGTATCACTCGTTGTTTCGATTTTGATTCCAAGAGCTTTGAAAAGTTCCTGCACAGTGATGCCATCTTCTTCCAAATCCATTTCATGTTCCAACAATTCATAGCCAATTAATTGACTAATTGTTCCAGTTAACTTCTCAATCATTGATTTGACTTCTGGTTTATCATTTAATTGTGC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGTACCATTCTAAACAACATGACTCTAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: R [matched GTTTTGGTACCATTCTAAACAACATGACTCTAAAACA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 858824-858992 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB932385.1 Enterococcus faecalis EnGen0081 strain 7330259-5 acsSh-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 858824 37 100.0 29 ..................................... GTTTTTAATATTGCCGTCTTTTAAATAAG 858890 37 100.0 29 ..................................... TGATTGGAGCTCCAACATGGGACGGTCGA 858956 37 78.4 0 .............................NNNNNNNN | ========== ====== ====== ====== ===================================== ============================= ================== 3 37 92.8 30 GTTTTGGTACCATTCTAAACAACATGACTCTAAAACT # Left flank : TTCTCGCCAATGTTACAATATCAAACATATTATTTCCTCCCTGATTTGCCTCCACACAAAGAAACAAGCTTACCTGAATTGTTCATTTCCATTAGCGATGACTCCTTTTATCTACGAAACTAAAAGAAAATTCAAGTGAACTTTTCCAAAAAGTGTGAAAATGCATGTAATATAGAATAATTCCAATCTAAGTATACAACTTTCTGAGGCAGAAACCAAACAATACAGAAGCATTTCTCACAATTTTTTTAGGTGCTACCAAGATTTCTTCCCTTTCTTCTATCAATAAAAAAAGCCCTTCCTAAAAAAAGGAAGAACTAATCTCAATCTATCAACATTTTGACTTATCACTTGATTAGTTTTCGAAAATTGAAACAGCTCGTCTTTGATGATAAAAATTCTAATCTTGTGATGAAAATTACGGATTGCTTGAGGTGATAGTTTGTTTTTTAACAACATGGCTATAAAACAGGGGAGAAAAAGCCAAATCAAAAAAGTTT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCATTCTAAACAACATGACTCTAAAACGATAAGTATTACACATCAAAAAAATGCTTAGTTTTGGTACCATTCTAAACAACATGACTCTAAAACTTCTTAGAACGCTATTCGGAACGCTTTAAGGTTTTGGTACCATTCTAAACAACATGACTCTAAAACTTACTTTCTTGATAGATTCTTTAGCCTTATGTTTTGGTACCATTCTAAACAACATGACTCTAAAACGCATCAATCAAAATTCCCTCAATCACATAAGTTTTGGTACCATTCTAAACAACATGACTCTAAAACGAAGATGGTAGCGAAGTTATTGTAAATCCCGTTTTGGTACCATTCTAAACAACATGACT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGTACCATTCTAAACAACATGACTCTAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: F [matched GTTTTGGTACCATTCTAAACAACATGACTCTAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 859499-859198 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB932385.1 Enterococcus faecalis EnGen0081 strain 7330259-5 acsSh-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 859498 37 97.3 29 ....................................G GGATTTACAATAACTTCGCTACCATCTTC 859432 37 100.0 29 ..................................... TATGTGATTGAGGGAATTTTGATTGATGC 859366 37 97.3 29 ....................................A TAAGGCTAAAGAATCTATCAAGAAAGTAA 859300 37 97.3 29 ....................................C TTAAAGCGTTCCGAATAGCGTTCTAAGAA 859234 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 5 37 98.4 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : TGTATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATATCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : AAGCATTTTTTTGATGTGTAATACTTATCGTTTTAGAGTCATGTTGTTTAGAATGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCATGTTGTTTAGAATGGTACCAAAACTCGACCGTCCCATGTTGGAGCTCCAATCAAGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACCTTATTTAAAAGACGGCAATATTAAAAACAGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACAAACTTTTTTGATTTGGCTTTTTCTCCCCTGTTTTATAGCCATGTTGTTAAAAAACAAACTATCACCTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGT # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //