Array 1 430988-431419 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR215978.1 Parabacteroides distasonis ATCC 8503 isolate Parabacteroides distasonis 82G9 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 430988 36 94.4 30 .......T.G.......................... CACGAGTCGGTAGTATTCGCTAAAACGAGT 431054 36 100.0 30 .................................... ATTAATTCAATGTAAAGGATAACAAAATGA 431120 36 100.0 30 .................................... ATCTACATCAAAGACCCCGACGGCGAACCG 431186 36 100.0 29 .................................... GCGTAAGGATGTCATCAAGGATATAGACC 431251 36 100.0 30 .................................... CCCGAGTATCTAGGTATCGTGAGGTTCCAA 431317 36 100.0 30 .................................... ACAAGAAGGATTGAAATCGATTGCAATATA 431383 35 80.6 0 ................-...C.........A.TGTT | A,A [431408,431411] ========== ====== ====== ====== ==================================== ============================== ================== 7 36 96.4 30 GTTGTTTCTACCTTTCAAACTAAAGGCTAATACAAC # Left flank : GCAAAACAACAGGTAACTTGAATCTTATTCGGTTCGCCTCATTTCCATTGCTTCCTTCTTTGGTTGAAGCGCCTATACCTACTACACTGGCTAATACACCGATCTTTCCGCTATTTTCCTTTATTTCAGAGGTACTGACTTGTAGATCAAACTCTACTGATGAAACAATAACACCTTCACTATTGTCTATCGTCTCAAAGTTTGTATTCTCTGCATAGCATGGATTTACCACTACTCCTTTATCTTTCAATTCATCATTTAATTCATAAACAGCTTCCGAAAGCTGGGTTATAGCGGATTTAATAAATTCTTTTAGTTCCATAAACAACAAAGCCCGCATTTCAGACCGGCCATGATCCTACTTTGCGGGCTTTTCCTTCAATGAAGTTTATCTTTTTCAAATATCTCGCATGGCCTCGATATATTTGATATCTAATCTTTTTGTAAAGATAGAATAAGTTCTTGATGAATCCAAATTATTTTCGGATAGCCATGCCTGT # Right flank : TTTTATGCTGATGAGTCATTCGAAAAGTCTTCTAATTTTATATTTTCTATCTTCATTTTAAATTCTGCTATAATCTTTTTTGCATAGACGAAATCGTCAGAAATCTCTTTGATACATTCAGCTTCGTATTTATCATGTAAGAACATATTCCGAGTTTTAATGAGAAAAGAACTATCTATCTTTTGTTTAGTTCGTTTCTCATATTCTGTAATTAGCTCATTAAAATCATAATAATTTCCGGGAGTAGCCTTCTTTAAATCTGGGAACATCGATACCATAGCGATTTCGAAAGAATGAATGATAGGTATGATTTGTATCTGGGCTTCTTCGAAATCTAGGCATTCTCTTTTATAATTTTCATAAGGTTGTATCTTTACGCTAGAAGATATACTATTGTTTCTTTTGACTTTACTTAATACTTTATTCAAAGAGTTGATTCTTGTATCATGATGTATATAAAATAACTTTCCGTAGTCTTTTATCTTGATATCTTCTCCTTG # Questionable array : NO Score: 3.08 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTTCTACCTTTCAAACTAAAGGCTAATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 1557515-1558076 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR215978.1 Parabacteroides distasonis ATCC 8503 isolate Parabacteroides distasonis 82G9 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 1557515 33 90.9 34 ..T.A...........................A ATCCATAAACAAGGAACATGTAGGTACTCATCGG T [1557519] 1557583 33 97.0 32 ................................G GGTGATTTGTGCGCTCTCGTGGGCTTCTTCTC 1557648 33 97.0 33 ................................A GTCCAGTCCCATCGCGAACAGCAGAAAAATGAC 1557714 33 97.0 34 ................................G GATATCCTGTTTTTGACGATAATATGTCCATCAC 1557781 33 100.0 33 ................................. TATAAAATATCCTATCTGTTACCGGGAATGACG 1557847 33 100.0 32 ................................. TGAATTTGCACGATTCCATGTGTTATAGATTT 1557912 33 97.0 33 ................................C AATCATTCGGGTGTACCTCCTCTATGTATGAGA 1557978 33 97.0 33 ................................G CAAAATTAGAGCATAATGGCCATGCGGATATCT 1558044 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ================================== ================== 9 33 97.3 33 GTCGCACCCCGTGTGGGTGCGTGGATTGAAACT # Left flank : TCAGAAAATATTCGGAGTGTCGGTACTGTTTACCACTGCCAGTCAGCCGGTACTTAGCGGACTGATAGAAGGAACTAATCCTAAGGCCAATTTTCAGGGAATAGACCATATTACTGAAATCATACCGAATGAGTTTGCCCTGCATGACAAGCTCCGTCGTGTGAAGTTAGTAATAGACAACACAGGAAAGACATACGATGAGATTGCCGCCAAAGTTGCTATATACAATAAGGTATTGTGTATCGTAAACACCCGAAAAGATGCCAAGGAACTGTATGACCGTTTACCAAATGAAGGAATAAAGCTCCATCTATCGAGAATGATGTGTCCCGCCCATATCAGTGAAACCATACGGAAGGTCAAGGTATTGCTGAAAGATAAATCACATCCGATTGTCAGAGTAATAGCTACCCAACTTGTAGAGGCAGGGGTGGATATAGATTTCCCTGTTGTATTTCGGCAAGAATCAGGTCTTGACTCTATTTTACAGGCAGCGGGGC # Right flank : TTTTGTAAAGCGCAAGCTTTTTCATAAAAGATATACTTACGTGATGAAGTATATCTTCTATGGGACTTGAAGTGTTCTTCTGCGACGAAGGGATTAGTACTTCGTAAAAATAACTTTTTAAAGTCACTGACACTGACATATAATTTCGCTTAGTTATTTCTGCAAAAATCATTCATATGTAAACAAGTTTCGTATATTCGCGACCTTATAATAGTTTAAATATGGCAGAGGAACTACGGATTAAAAATGGTGATAAACAGGAAATGTATGAGACGTTGCTCCCGCAAATCGCCTCATTGGTAGGTAACGAGACCGACCTAATCGCTAACATGGCGAACGTCGCCGCAGCACTCAAGCAAACTTTCGGTTTCTTTTGGGTGGGTTTCTACCGGGTCATAGACAATCAGTTGGTATTAGCGCCTTTTCAAGGCCCTATCGCCTGTACACGAATCAAATACGGAAAAGGGGTATGCGGCACGGCTTGGAAGGAGACCCGTACG # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.20,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,1.42 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //