Array 1 1063-1812 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZSF010000003.1 Enterobacter kobei strain ECC24 NODE_3_length_632385_cov_140.879698, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1063 28 100.0 32 ............................ TAAGTGAGCGAGAGTAGGCCAGTAGAAATCAT 1123 28 100.0 32 ............................ GGAGAGGAGCTTATCGTAATAACGCGGAGGAC 1183 28 100.0 32 ............................ ATAACCAACCTCGCAAATAGAATAGAGCGCAA 1243 28 100.0 32 ............................ GCTGTGAGTTTTGGTGTCACCTGGCACAGTTA 1303 28 100.0 32 ............................ GGCATCGGCCGCGCACACTTCAAATCGAAGAA 1363 28 100.0 33 ............................ GTGGAAGCGCGTGAAAAATTACGCTACAGACTT 1424 28 100.0 32 ............................ TCAGACCGAACAAAGAGACGCTGCGCACGTTT 1484 28 100.0 32 ............................ GACGTCATCACATACGCGGCCCACGTCACATC 1544 28 100.0 33 ............................ ACTTCGCGCAGGTGCCACGACTCCACGCCGATT 1605 28 100.0 32 ............................ ACCACTGCCCGCGACGTACACCCAGTGCGCCT 1665 28 100.0 32 ............................ AGTACGGGGCGAATATGTCAGAGTTCGCCCGC 1725 28 100.0 32 ............................ TCTACAGGACAAAACTGAATTACCAGCAGTCT 1785 28 75.0 0 .....................ACCTCTC | ========== ====== ====== ====== ============================ ================================= ================== 13 28 98.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCTCAAACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGACAACGAAGCCGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGAGACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTGCTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGATTACTGCATGACATCACACATTCAATGGCGGCAGATGTGGTATCTCCTCATGATGCTGGAACGGGAAATTCTGTTATTTCTTGAGTGGAGTGCGCACCGCCAAGGGATGTCCCCTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCATTGATTTATAATGTTTGCTTTTACGTTGCAGAAAAAAGGGTTTAGCATGGTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCA # Right flank : CAAACCAACCCACTATAATATTCACCAAACCTATTTAAAACCTTATACCATTCAATCTGCACTCTCTGCTTCCACAATAAATAAAAAACCTATTCACGCATAAATTATATTCCATTGAATATATTATTCGTAAAAATAATATATTGTCATGAAAACATGATTTTCCACTTTATTACCACGATGATTATTATTCATTTGATGTCCGTCACATTTGTTTTCATTCGTTCTTCGCTAACATACTGCACATTCAACACCTTGAAATCAAAGCCCTTGCCATGTCCGTAAACAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTACCTGGAAAAATGTCGCATTCAAGTGAATGGTGGCCGTGTTGAATATGTTACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCTATCGCTAATACTACGGCGGTAATGCTGGGAATGGGAACCTCTGTTACACAAATGGCAATGCGGGAA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 11630-12981 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZSF010000003.1 Enterobacter kobei strain ECC24 NODE_3_length_632385_cov_140.879698, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11630 28 100.0 33 ............................ CAGTAGAAATCATAGCGGGTCTGCCTGCTGAAC 11691 28 100.0 32 ............................ TCAGCAGCAGACACCAGATCTCTCTCCCATTT 11751 28 100.0 33 ............................ CTGCGTAGCCTGGTAATTAGTACGAAGAGCATT 11812 28 100.0 32 ............................ TGTTGTTGAATAAACGCAAATACATCTGCTTC 11872 28 100.0 32 ............................ AACCGAAAAAGAAGTTACAGCCGCGCAACGTC 11932 28 100.0 32 ............................ GGGTTATACCGTCACGCGGCCAACCGAAAAAG 11992 28 100.0 32 ............................ GCGAGAGACAACCTTGTCGTAATTAACAATGT 12052 28 100.0 32 ............................ AAAGACGTCCAAGTCAACTGGATCACCGTTAC 12112 28 100.0 32 ............................ CACAAGGAAGATGATTAATGCAAATCAAACAC 12172 28 100.0 32 ............................ TCAACCCCAAATGTTGAGCGGCGCACCCCAGC 12232 28 100.0 32 ............................ ATGGAGTCAAACCGCAGGCGCCAGGCTGAGAT 12292 28 100.0 32 ............................ AAAATCACCGAAGTGGCGATCACTTCCGTTCT 12352 28 100.0 32 ............................ CTCGAGCATTTCGATAACTTCGCGGCGCTTGT 12412 28 100.0 33 ............................ CTCTTTGACTGGCTGAATACTCATCATTGCGCT 12473 28 100.0 32 ............................ TTTTTTGACACCCTACGCAGATTGCGAAGAAC 12533 28 96.4 32 ........T................... CGCCCGAGGTGATATCAATATATTTGCTAAAG 12593 28 100.0 32 ............................ GAAGGCGGAACGCTCGTTCGCAAACATCTCAC 12653 28 100.0 32 ............................ GCAGGTCACTAATCTGGGCGATATGACGCAGA 12713 28 100.0 32 ............................ TGAAAACTTTTGTCAGTTAGACCGTTTATGGA 12773 28 100.0 32 ............................ TTGTAAGTCGCTCACTATCCAGCGCCGCGAAC 12833 28 100.0 32 ............................ CGCATCAATACGCGCGGCGATCTGCGTCATAT 12893 28 100.0 32 ............................ AGTGATGGGGGATATTACGGCAAAGCCGTAAT 12953 28 92.9 0 .........A.....C............ | C [12978] ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGGCCACGCGCTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGCTCATTAATTCCAGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGAATATTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCTGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTGCCTCCTGGGTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATAATGAATGGAATGGGTGTTTTTTAAGCAGGGTGGTTTATAAGAAGAAGGGCGTTTGACCCTAATTTTTAGTGCGTTTGTAATGCATTGATTTTAAATGGATATTTTGAGAGGGTAAAAAAGAGGGTAAAAGATGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGGGATATTATTTGA # Right flank : AATAGAAAATAAGGACTCCCCTCCTTACTTTCTACACTGTCGAGCAGACAGCCCCGCGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCAACAGCACCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //