Array 1 59034-60721 **** Predicted by CRISPRDetect 2.4 *** >NZ_REHJ01000004.1 Lactobacillus sp. ESL0228 Ga0226852_104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 59034 36 100.0 30 .................................... AATCGCTTGGGCGTGAACTTGCGGATAGTG 59100 36 100.0 30 .................................... GAGAATGAGCAGAGAAAACCAGAAGAGCAA 59166 36 100.0 30 .................................... TCATTACATCAACATCTACATCATTTAAGG 59232 36 100.0 30 .................................... AACAAATTAAATTTAAACGTAATTTTACGC 59298 36 100.0 30 .................................... TTATCTAGAATTAAAACTTAAATATAATTA 59364 36 100.0 30 .................................... TATCCAAGCAATAATGATGCTGACTTCAAT 59430 36 100.0 30 .................................... GCAGATACTGTCACAGCCACACCGAAAAGT 59496 36 100.0 30 .................................... GTTTTCAGGCAATATTGTTAACCTCTCGTT 59562 36 100.0 30 .................................... CAGTGCCCCACAATATCTGACGGCTTATAC 59628 36 100.0 30 .................................... TGGTTGATAAGGAAACGTACGACTTTGTTG 59694 36 100.0 30 .................................... TTTGTTGGTTTGGAGGTTTTTTGTATGTCT 59760 36 100.0 31 .................................... CCCGGAACAAGGCAATCTGCCTTGTCTGTTT 59827 36 100.0 30 .................................... CTTAACTTCTTCTTTAGATTCCTTTTTAGG 59893 36 100.0 30 .................................... TTTCGTGATGATGAAGATGAAATTGATCGT 59959 36 100.0 30 .................................... GGACAGCCCACTCAAGCTGATATAGATCAG 60025 36 100.0 30 .................................... CAGATGTAGCAAACATTATTGATTTAGATA 60091 36 100.0 30 .................................... TTCAAAATTATTATAACAAAATTTGCCACT 60157 36 100.0 30 .................................... TTTCTAAAGCAAAACATTTACTTTTACTTC 60223 36 100.0 30 .................................... AAATATCCAATCAGGAACAACTGATCTAGC 60289 36 100.0 31 .................................... TTTGGGGTTGTCTACTTTGACTTTATCACTA 60356 36 100.0 30 .................................... CCACTTAAAGAAGTTACATTTAACACCAAT 60422 36 100.0 30 .................................... CCAATCAGCCGGTAATAGACCATAACTAAC 60488 36 100.0 30 .................................... GAATGACTATCGGTTAAATCAATTGAATGG 60554 36 100.0 30 .................................... GAAGGAACTATTACTCAAGAAGAATTCGAA 60620 36 100.0 30 .................................... TAAAAAACTTGCCAAGGTTCTATCGTGTCA 60686 36 91.7 0 ..............................C.A.T. | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 99.7 30 GTTTTAGATGGTTGTTAGATCAATGATGATTAGAAC # Left flank : AGTGATAATATAATTAAAAAATACATGTCAAATATTTTAAATAGTTATATTGCTAATATTAACGAAAATAATCGAAATCAAATTTTTGTCGCATTGCAAAATTTAGAGGGAGCTATTGATGATTCATTAATGCTGGAAGATTTACCATTAATAATTGAGTTTGATGATGATTTGAAAAAACTTTTAAAATTTGTTGATTTACACATAGATTCTAAATTTACTAAGAATCCATATGCTATAATAGATCTGGTTCTGAAAATTCATCAATCATGTAACTTGAAATCGATCCCTGTGATGTGTAATTTGACACACTATTTAGAACGGGATCAATTGATAGAGTTATCAAGTTTAGCTCAACAAATGAATAGGATGGTAGTCCTTTTAGAATTTACACCCCCAGATTTATTGGTTGTACCTGAGGGTGTGCAATTTTATTATATTGATCAGGATCTAATCGATTTGTACTGACATCTATATTAAAACTTTATTATAAAATATCG # Right flank : CCAAAAAATGGTGTGGATAGTGTTTTAACCAGTTGTTTAGAAAAGATGCAAAACTTAATGTATTATTAACTAAAGAAAAAAATATATGTTTTAATTGTAAATATTATGTAGAAATTGTTCATCAACCTATTTCAGTTAAAGACGTTGTAAAACAAAATAAAGGATATTATTTCCTTGATGTTTTAGCTACAGTTATATTGTAATATTCACATTTAAAGGACTAATTATAAAATTATATATCTTATTTGATACAAACTAATGATACTAGAAAAGCACTAAACCACGTCCGGTTTAGCGCTTTTCTAGTATTGTATTAATTAAGAATGGCTGGTTTTATCCCATGAATTGTGTCCACTTAATTGTCTCACAATTGAACAAAAGGGAACAATAGCCAATACCCAGCGATATAAACTAAAACTGAAAACATTTTTTATAATTTGATTAAAACTCAATTTAATATTGCCTTCGGAGGCCTTTAATTGTTTTAAAACCACTAAAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //