Array 1 29416-28899 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYSP01000013.1 Pseudomonas sp. ENNP23 contig00013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 29415 29 100.0 32 ............................. GAGTGACTGAGCCATGGCAACCAGAAAAGAGA 29354 29 100.0 32 ............................. CAGAACTGATGCGCATGTCCTTCCTCACTCAG 29293 29 100.0 32 ............................. TCGGCGCAGCGGTGTGCGATGTCGATCTTCAT 29232 29 100.0 32 ............................. CTGGTCCCCCCGGACGGCATGACTGCCCTCGG 29171 29 100.0 32 ............................. GCGGCCTCGTTGCTCGATGAGCTGACCAAGCT 29110 29 100.0 32 ............................. AACGCGCCCCAGATCCATGTCGTGCAGTCGAT 29049 29 100.0 32 ............................. TTCGCATCACCCGCGAGCAGGGACACCGGCAC 28988 29 93.1 32 .........................T..A GAAGAGCCAACCAGACTGCCGAAGGTCGAAGC 28927 29 75.9 0 C..........AAA...........G.GT | ========== ====== ====== ====== ============================= ================================ ================== 9 29 96.6 32 GTGTTCCCCACGGGCGTGGGGATGAACCG # Left flank : GGGTCGCATCATCCCGCTGATCGAAGAGGTGCTCGCAGCCGGCGGTATCCACCCGCCCGAGGCGCCGCCGGAGTCCGTACCGCCGGCCATCCCCAACCCCGACAGCCCCGGCGATGCCGGCCACCGGAGCCGGTGATGGCCTTTCTCACCGTGGTCACCGAGAACGTCCCGCCACGCCTGCGCGGGCGCCTGGCCATCTGGCTGCTGGAGGTGCGCGCGGGGGTGTACATCGGCGACGTCTCGCGGCGCACCCGGGAAATGATCTGGCAGCAGCTCGAAGCCGGGTACGAGGACGGCAGTGTGGTCATGGCCTGGGCCAGCCAGAACGAGTCCGGCTACGACTTCCAGACCCTCGGCAGCAACCGCCGCGAACCGGTGGACCACGACGGCCTGCGGCTGGTGGCCTTCCTGCCACCGACCACCGCAGATTCCACACCCAAATAATCGGTAGATTTTCAGGAGGTGATTTTTATCTTTGAGAACAAGGGGTTGCAGTTGGT # Right flank : CGCGACCCTACCGCCGCTGCCAGATCTTCCGGCCGCCCTGGTCTTCGGTCACCAGGTAGGGGGCGCTGAAGCGGTAGCGGGTGGCGGGCTGGTAGTCGGTGCCGCCGTCGGGGCGGACGAGGAGGATGCCGTCGGTGGTCTGCCATTGGCCGGCGTACTGGAGGGTGCCGTCGCTGTCGTAGCTCCAGTCGGAGCCGCCGCCGACGGAGCGGCTCCATTGCTCGACGCGGCCGTCGGGGGCGAGGTGCAGGGTGAGCACCGTGTTGAAGGAGGCGAAGCTGGCGCCACCGCTGTTGATGATGTCTTCGTGGACCCAGGTGCCGACCAGCGCCGGGTCCAGGGTGCCGGCGCCGGTGCGGGTGGTGCCTGTGGCGTGTGAGGGGCTGCGCTGGAACAGCGCCTGGCGCTCCAGCACCTGGCCGCTGACGGGGTCACGGGCGGCGAGGTGGGCGTTGAGCTGGTCGTTGCCGTAGGTGGCGGCGAGGGTGGCGATCACCTGG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 40048-39651 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYSP01000013.1 Pseudomonas sp. ENNP23 contig00013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 40047 29 100.0 32 ............................. GCGGATCTGGCGAAATCGGGTTTGCATGGGTC 39986 29 96.6 32 ............................C GATGCAGAGGAGAACGACCTGTGAAAACTCAC 39925 29 100.0 32 ............................. ACGCTGGCGGTGCGGATCTCGCCCTTGGTGTC 39864 29 100.0 32 ............................. CTCGTCGAGCAGGGCGTTGGCTTCCTGGATGT 39803 29 96.6 33 .........................G... AAGCGCCGCATCCCCGAGGGTGCGGTGAAAATG 39741 29 100.0 33 ............................. GGAGGACGGCCGGAGTCTCTGGAGGACAACTGC 39679 29 86.2 0 ............T.C.......C.....C | ========== ====== ====== ====== ============================= ================================= ================== 7 29 97.1 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GAAGAGACCATCCTCCCGCGCCTGTACCGCGAAGCCCCGGTCAACTCCATCTGGGAAGGCTCCGGCAACGTCCAGTGCCTGGACGTCCTCCGCGCCCTGTCCAAGGAGCCTGGCGTGCTCGATGCCCTGTTCAGCGAACTGGGCGACGGCCACGGCGACGCCCGCCTCGCCGCGCAGATCAACAACCTCAAGGCCGCCTTCCACGACACCGCCGACATCCAGTACCGCGCCCGCCAGCTCACCGAAGACGTCGCCGTCGCCCTCCAGGCCAAGCTCCTGCTGGAGGCCGGCAACGCCACCGTCTCCGACGCCTTCATCGCCAGCCGCCTCGGCGGCAGCGGCCGGGTCTACGGCACCCTCCCGCGCGGCATCGACGTCGAAGCCCTGGTCGCCCGCAGCACCCCGCACCTGGCCTGACGCCACCCTGGCAACAAGGGAAAACAGCCGGTAGATTTCCCGCTGCCGGCTTTTCCCTCTGGGATCAGCGGGTTACGGGAAGA # Right flank : ACCCCAAACCGGAATGGCCAGGCCCCACTGCGGGGCCTGCGTAGGATGGGGTGAGCTCGGCGAACCCCATCACCCAGCCGCGCCCCGGCCCTAGGCCGCCCGCTCCGCCAGCCGGCGCTGGCCGGTCAGCGCCGTGACCACGAACAGCGCCGCTGCCAGGCTCAGCGCCAGGGGCAGACCGTGGGGGCCGGTGCCCATCAACGCGCCGCTCAGCAGCGGCCCCACCAGGCTGCCGATGCCCCACAACATGCCCACGCAGGCGTTGGCCGTGACCAGGTCCTGCCCGCTGAAACGCTCGCCGATGCGCACCAGCGCCAGGGTGTAGACGCCCCCCGCCACCGCCCCCAGCAGCACAAGCGCCGGCCACAGCAGCGTGGGCCGGGTGATCAGCCAGGGCAGCGCCATGCCGATGCCCAGCGCCGCCACCCCGCAGACCAGGTGCAGGCGGCCGCGCTCGGTGCGGTCCGACAGCCAGCCCAGCGGCACCTGGCAGGCCATGT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //