Array 1 1616-63 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCMU01000029.1 Sporolactobacillus terrae strain SBT-1 sequence29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1615 32 100.0 34 ................................ CTTAAGATAAAGAATACCTTTAACCTGACCAGAA 1549 32 100.0 35 ................................ TCTTTAGTTACTCCATCCCAATCAAGAGGGTCACC 1482 32 100.0 33 ................................ GATTCGGTTTTCGGTGGGGGTAGCGGCGCAAAG 1417 32 100.0 37 ................................ CGTCTCATCTATGCCACGCAGTACCCAACGACCGAAA 1348 32 100.0 33 ................................ CTTAACAAGTGAAGAAACATCATTTTGAATTGC 1283 32 100.0 33 ................................ TTTAAATGGTGCGAAGACGAGGAATACATTTTC 1218 32 100.0 35 ................................ TAAAAAAGATATTGTCGTAGAGGTGATAAATCACC 1151 32 100.0 34 ................................ CTCCGGTTCATACATGTGATGGCATCATAGCCGA 1085 32 100.0 32 ................................ TTGTTCTGCCGCTTCTGCAGCTTTTCGATTAG 1021 32 100.0 35 ................................ AGATTAGTGGAAGGAACTTAGCTTTAGGTACTGCT 954 32 100.0 34 ................................ GGGCAATCCCCGAAGAGTTTGATGACAACGCGGC 888 32 100.0 35 ................................ CACATCATCCGCACTTAATGCCCTCATCTCGTCAT 821 32 100.0 35 ................................ CGTTGTCGGCTGGGGCGTCCGTCCTTAAGAATGCC 754 32 100.0 35 ................................ CATCAAAAGACCAACTCGAAAAAGAATTGATCGGT 687 32 100.0 32 ................................ TGACCAACTAAAGGTATCAACCGCCATTGTAC 623 32 100.0 34 ................................ CTTTCGCGGTCAAGCCGATTAACAATCTGCTGCC 557 32 100.0 32 ................................ ACTCCTCACTAAAAGCATCTTTAAAAGTCTGA 493 32 100.0 34 ................................ CATTTTGGCTGCTGCTTCCGGAACCCGATCTTTC 427 32 100.0 35 ................................ TTCCATACGATTGGCAATATAATCTTTAACATTAG 360 32 100.0 35 ................................ ACCATTGCATTCTTGCTGTATGTAGAACGGATCTT 293 32 100.0 36 ................................ CGTGCCGTGTCGATCAGGTGCATAAAACCGTGTCAG 225 32 100.0 34 ................................ ACGAGCAAAAAAAAGATTTAGAGCGCGTACGGAT 159 32 100.0 33 ................................ CACTTGAAGGTGCATACGAAAAATACCTTGCAC 94 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 24 32 100.0 34 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : TAGATGAATACCCGCCATTGCTCTGGAAGTGAGGTAAATCCCGTGCTTGTTCTCATCACTTACGATGTTAGTACTGTCACGAACGTCGGCCAAAAGAGATTGAGACGAGTAGCAAAAATTTGTCAAAGATATGGACAGCGCGTTCAGAATTCGGTGTTTGAATGTATCGTTGATACAACTCAATTTACAAGTTTAAAACTAGAATTGTCAGATGTAATTGACAAATCTACAGACAGCTTGAGATTCTATCGACTAGGAAAAAATTATAAAAATAAAGTTGAACATTTTGGGATTAAAAACTCAATTGATTTAGAGGGACCATTACTTTTTTAGTGCGAATGTAAAGTGCGCATGAAAATCTAGAATCCTTCGCACCAATGATTTTCAACTTATTTTCAAAAAAATTACATATATTGTATATATGTGTAAATTGATAGTGATAAATTTATGATAATCACAATAAATTACCGATTATTGATAAAAATTTGTAGTAATCGGCA # Right flank : TTTTACTGAGGTTGCTGATTGGATACTCGAAGCCAACGTCGCACTCCTTGTGAGTGCGTGGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 66144-64266 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCMU01000025.1 Sporolactobacillus terrae strain SBT-1 sequence25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 66143 32 100.0 34 ................................ GCGTTTTCCGCGGCGGGGTACGGGTGATAGGTCC 66077 32 100.0 33 ................................ CAAAGTCTCCGGCGTCCAAAGCGGATTCGCTTT 66012 32 100.0 34 ................................ AATTATTGCCTTCCTACGTGATCTCTCGTCAACG 65946 32 100.0 34 ................................ AAAAAAACATATTGTATTATGCGCAACTATCTCA 65880 32 100.0 33 ................................ CAAAATTGCACAAAGCATTGATATTTAATCAGG 65815 32 100.0 35 ................................ TTTGGAGTCGACGACCCACACGGGCTGTCCGCGCC 65748 32 100.0 36 ................................ ATAAAGTACATGTGATTTGTTTTCAGCAATAACACA 65680 32 100.0 33 ................................ TTGGCATCGATCTGTTTATGCACATCCGCTTGG 65615 32 100.0 34 ................................ TCCCCGAAGCTGCGTAAACGCCTCGGAAATCTTC 65549 32 100.0 34 ................................ ATATGTACACCCGGTCACCCGGGCGATAAATCAT 65483 32 100.0 35 ................................ TGGTTTTAAAGAAGATAGATTGTACTATGCGTTAG 65416 32 100.0 34 ................................ AAATGACCTCTTATTTTGAGTTTAAAGGTGAAAA 65350 32 100.0 32 ................................ ATATCGCGACTATGTTGAGTATGTGCATCATG 65286 32 100.0 33 ................................ TCATTCCAATTCGCCATCCTCTTGTTTTGTTGG 65221 32 100.0 36 ................................ ATGACGCATCAGAAGGGCTTGTCGAAGCATCCCGAG 65153 32 100.0 35 ................................ AAGCATCCTTTTAACAGCCCGCCTGATCGAATCGA 65086 32 100.0 35 ................................ TTGCTCGCCGTCTTGCTTCTTAAATGGCCGATTGA 65019 32 100.0 35 ................................ ATTGACGCGATCTTAAAGCCTCCGATCAGTTTCCT 64952 32 100.0 33 ................................ CGGATGGCTGAAGCCTCTTTCTGGAGTATTCTC 64887 32 100.0 33 ................................ AGCGTACGCCAACGCGCCAGCTTCGGTTAAGAA 64822 32 100.0 34 ................................ AAAACGCTGTCATCTTCGCCCACTTTTTTAACAA 64756 32 100.0 33 ................................ AATTAGTATGAACCAAATCTCCGGAAAATATTG 64691 32 100.0 33 ................................ TTATCTTTGATGTACTGCCCAATAGTTTCGGAC 64626 32 100.0 34 ................................ ATGAACGCTTCCTTCGAAGTAATAATCTGTGCCG 64560 32 100.0 34 ................................ CGTTCAGTGTGGTGTGCAACCCTGTGGATGATCT 64494 32 100.0 33 ................................ AGGTATTTTCACGGGAACAATGGCTAAGCTGAA 64429 32 100.0 34 ................................ CTTGAGGGAATATCCGAATTAGTTGAGCAATTAC 64363 32 100.0 34 ................................ CTCTTCTCGTAAACGTCTCACAAATCCGGCACAA 64297 32 75.0 0 .........T.CA.A....A..CA.....C.. | ========== ====== ====== ====== ================================ ==================================== ================== 29 32 99.1 34 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : AGTGCGTGGATTGAAATTAAGCGAGCTCGCACGGCTCGGCTACTCCGGCGC # Right flank : TTTTTTCATCTCCATATTCCGTGTTCTAATAGTAACCAATGTATACAAACCGCCGTGGATTCAGATAATAATGCTATGTGTCTGATGAGGTGAGGGGTATGGATATGGCTGTTAACGTCAGAGTCTCGAGTGTTGAATTACAGAACTGCAAAAATGTTGTTCAAGGTAAGCTGTATTTTCCGTGTTCGAAGAGTCATTCGCTGAAACGTGCGGATGTGCTGGGTGTGTATGGGCAAAACGGGTCGGGCAAAACGGCGATTGTTTCGGCGTTTCAAGTGGTGCGCACGCTGCTGAACGGTGGGCCGCTTGAGTCGGGCATTGACCGGTTGATCTATCAGCGCAGCGATACGGCGCGTTTTCTTTTTACCTTCTTGATTGGAATGGCGAACAAACACTATGAGGTTGTCTATGATTTTTCCCTGACGAAACGCGATCTGGATGCCGATGATGCAGTGAATTTGGCCAATGATCGTCAGCGCGATCCGGTGACCGTTACCCAT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //