Array 1 131990-132506 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHZK01000069.1 Klebsiella quasivariicola strain 2CML-B NODE_127_length_158906_cov_67.203987, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 131990 28 100.0 33 ............................ TGGGTTTTCGTTCGAGTTTAGCGCCTGCAGGCG 132051 28 100.0 33 ............................ CCAGTCGCCAGGAACAAACTGTTCAACGGTTAC 132112 28 100.0 34 ............................ TTATTATCTGCCGGTCGAATCCTCATATTTAGAG 132174 28 100.0 33 ............................ TACATCTGGCGCGAGAATAAGAAAGGCAACCCC 132235 28 100.0 33 ............................ TTGCTCTTGCCACAGCCGCGCCACGTTTATTTT 132296 28 100.0 33 ............................ CGGCCGGCCCTCTATGATCCATATTTTTGAACC 132357 28 100.0 33 ............................ TCGAATGGGAAAACCTGTTCGCTTTTTTATCAG 132418 28 96.4 33 ......................A..... TGGGATTCAGCCTGGGTTCTCTCTTGATGTGAG 132479 28 96.4 0 ..........T................. | ========== ====== ====== ====== ============================ ================================== ================== 9 28 99.2 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : GTCAGCGTCGGCCAACCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGTCTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTCCCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGTGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTGCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCCGGGAATGACAAAAGTGTTTTGCGCCTGGCTGCGGCCCGGGGAGGCGAGTAGGGTAGACCGGTCCTGGTCAGCAGCAAGTCAACGGTGGTGAGATGGGGACTTACTTTTTCGTTTGATGAATGTGATGCTGATGCGGAACCCCTGCGGAGTGCAATTATCGTAAATCTGGTGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : CTCATGTAACTTTCAGTGCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGGTCAACCGTTGTTATCGTTATCTTGGTTTAGTTTGGCAAACACAGTTTAATATATTTTTCATGTGAATTTAAAATTCATATTCATGTGTTATATTTATTTTTTATTTCGCAATGGTTGTTAAGTCCATTTTTCTGGCGCACCTGAAGTATGATTATTCATACTACTTATTTATAATGTCTGATATTGTCGATTTGATGTCTCACATTAAGCGCAGCGTTTGTGAGTGCTTTTTATTTTATAAAAAATTATTTATAAAGCTTCCTGACTTTAGTATTAATAAAACGCACATGTTTTATTAAGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 141356-141932 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHZK01000069.1 Klebsiella quasivariicola strain 2CML-B NODE_127_length_158906_cov_67.203987, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 141356 28 100.0 33 ............................ CGGGTGAACTCCCCCCGCAGGTGGAGGTGTTTG 141417 28 100.0 33 ............................ TTTGCTGGTCCGCAGCGCGGTCGCGGTTGGGGG 141478 28 100.0 33 ............................ TATATTGGCTATATCCCGATTTATACAGGCATG 141539 28 100.0 33 ............................ TCTGAGCTGGTGGCCATTAATGCTGGAGCTGTA 141600 28 100.0 33 ............................ TAGATAACGACCCGGACGACTTCCGGCGGCGGC 141661 28 100.0 33 ............................ TCATCCTTAACGGGTCGATGATTGAGCCTGTGA 141722 28 100.0 33 ............................ CCAGCCATCGGCAAAGCATATCGCGCGACCGTG 141783 28 100.0 33 ............................ CTCGCGCGCCGCTGCGGGCTGATCACGGCCAGC 141844 28 100.0 33 ............................ CAAAGAGGGGATCTGTTACGAGCTGCGCGACTA 141905 28 71.4 0 ........T.....T......C.TAGCA | ========== ====== ====== ====== ============================ ================================= ================== 10 28 97.1 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TATATAAAGAACGACTCTGTATCGATCTGGCTTTTTCGCTGTCGAGGGAGATGGCGGGTCGATATGATAAACATAAAGTTTCTGAGGCATTCAGAAAACGAGTGATAGCCCTGGATTTGCTCAACCTTATTGCCGCCGATATCAATGAGCTAATGGGAGGAAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCCCGGCCAAATGTGTTCGTCTCAGGCGTCAAAGATTCGGTTGCACAAACCGTTGTTGATTATCTGATGCAGTACACGCCTGTGGAATCGGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGAACTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAATTCTCGCTCTTTCACAATATGTTGGT # Right flank : AATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTTAAAATGATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAGTATTTTATTGCGATAGAGAAGGGAACTGTTTAAAGCAATAACCGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGGCTTTACCAGTCACATGATTTAATACGCCAGTTAAAACCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGTGTGTATACATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCCTACCGAAGGAAATATACAATTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTACGATGAGGTAGAGCACAGGCTACAAATTGGCTGGCTTGTTGGTCTGGATATCTCCAGGTGTTGGAGCAGTGACAGAAATCCATTTTACATCG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //