Array 1 27548-25598 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZWE01000014.1 Neisseria meningitidis strain Neisseria meningitidis isolate B291, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27547 36 97.2 30 ........G........................... GGACGGCGGTTCTAAAATATGAAAACTCAA 27481 36 100.0 30 .................................... AAACTCAACGCATCTAACATAGTTCACACT 27415 36 100.0 30 .................................... GGTCAGATTATAATAACGTTGAGCGCGTGT 27349 36 100.0 30 .................................... TATCATGATGAGCATATTTATGAAGAGGTA 27283 36 100.0 30 .................................... CTGGAAGACTGGTAAGAAACGAGATGCACA 27217 36 100.0 30 .................................... CGATTTACCACCCATAAAACCACCTCAAAA 27151 36 100.0 30 .................................... TAATTTGCGTTTCGTGTCGCTCATAAACCC 27085 36 100.0 30 .................................... ATAAATCAATACCGTGAAAACCTCATGTGT 27019 36 100.0 30 .................................... AAAAACTTTTTAGGGGGGTCGGAAAAATAC 26953 36 100.0 30 .................................... ATTTATATTATTTTTGATTTTGATTTTTTT 26887 36 100.0 30 .................................... ATAAAAAATAAAAAAAACCAAAAATAATAG 26821 36 100.0 30 .................................... ATATCGTACTCTTTTACGTTATTAACAAAT 26755 36 100.0 30 .................................... ACTTAATTTATTCAGTTCTTCTTTATGCCA 26689 36 100.0 30 .................................... TTCGTACCCAAAAAATCGACCGCGTAACGG 26623 36 100.0 30 .................................... AAAACTTTTTAGGGGGTCGGGAAAAAATAC 26557 36 100.0 30 .................................... GCTCAGTTGGAACAATGAATACATCTTGAA 26491 36 100.0 30 .................................... ATAGGTTCTATTAATACGTCTTTCGTCTTC 26425 36 100.0 30 .................................... TTTTCCAGCGCGATGAGATACCCGGCATAG 26359 36 100.0 30 .................................... CTTTTGCCGCCATCGACGCAGCCGACAGGG 26293 36 100.0 30 .................................... ACTTAATTTATTCAGTTCTTCTTTATGCCA 26227 36 100.0 30 .................................... TTCGTACCCAAAAAATCGACCGCGTAACGG 26161 36 100.0 30 .................................... AAAACTTTTTAGGGGGTCGGGAAAAAATAC 26095 36 100.0 30 .................................... AATATTTTTTTATAAATTGCCATCAGAACG 26029 36 100.0 30 .................................... CAAAAACTTTTTAGGGGGTCGGAAAAATCC 25963 36 100.0 30 .................................... AAGCCTTTTTTGAACTCGCTGTTCATGAGC 25897 36 100.0 30 .................................... CTTTTCCGGCAGAATAGGCGAGCGCGTCGC 25831 36 100.0 30 .................................... GGTTCGGTTTTCTGTAACGCCATATCGCCA 25765 36 100.0 30 .................................... GGTTCGGTTTTCTGTAACGCCATATCGCCA 25699 36 100.0 30 .................................... GGTTCGGTTTTCTGTAACGCCATATCGCCA 25633 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.9 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //