Array 1 1814568-1817035 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG700527.1 Anaerococcus vaginalis ATCC 51170 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 1814568 30 100.0 37 .............................. GATAGAGAATATAAAAATTTTAAGTTGTCTGGTGCTA 1814635 30 100.0 35 .............................. CTTGATAGACAGATAAGAAATATAGTTGAATATCA 1814700 30 100.0 35 .............................. ATAATAATTCTTAAAATTAGATCTAAACTTTCTGA 1814765 30 100.0 35 .............................. AGGGTTGCTTTGCAACCCCTTAGGGGCTTGCCCTT 1814830 30 100.0 36 .............................. GCCGTTTTAAGAAAGATTGAGGCGATAGAATGATAT 1814896 30 100.0 36 .............................. TGTTTCTGCTCTTGATATTTCTGTTGGTAATATTAA 1814962 30 100.0 35 .............................. TCAAGAGCTGAAACCCTATTATCAATATTAACAAG 1815027 30 100.0 36 .............................. ATAAGTCCAGAAAAGACGCTTTAGAGTTTGATATTT 1815093 30 100.0 36 .............................. AGTATTATGAATGATTTGATTAAAAAGAGGAAAGAA 1815159 30 100.0 36 .............................. ATTAGTTTATTTAAGACGAAAGCTGATACGATCCAA 1815225 30 100.0 36 .............................. TAGTGGAAGAAGAACACATCCTATAACCAAGATAGC 1815291 30 100.0 36 .............................. AACTGAAATGGGTAAAAGATTAGGTATTCCTACTTC 1815357 30 100.0 37 .............................. AGTTCAAATTCGTCATTTTTATAAACTGCATATCCGT 1815424 30 100.0 36 .............................. TTTTACAACATTTAGCCACGCATAAGTAATAGCAAC 1815490 30 100.0 36 .............................. TCAATATTGGTTATATTGTTATAAGCCTTAGACTTA 1815556 30 100.0 37 .............................. TTCTAGGATAAATACCAGAGCCAACCCCATTGAAATA 1815623 30 100.0 36 .............................. TCAATTATATTACCATTTTCATCATAATATAACTCA 1815689 30 100.0 36 .............................. TGGAGCAGCGTTACTAAAATTTATTCCTCTTAGATC 1815755 30 100.0 35 .............................. AGGGATTATTTATCTCATTCAGAACGGTTGAAATT 1815820 30 100.0 37 .............................. AAATCAAATAAATCACAATAATCATCATTATAAGACA 1815887 30 100.0 36 .............................. CATAAACTTTATAATAATAAAAAATTAGATTATTTA 1815953 30 100.0 35 .............................. ATTCCTGCAAGTATAACTAATGCTATTGCTCCAGT 1816018 30 100.0 34 .............................. TATTTAAGACAGCGTCAGATTTGGGAAGATAAAA 1816082 30 100.0 36 .............................. TATTGCTGTTAATAAGTCTTATTTTACGGATACTAA 1816148 30 100.0 34 .............................. CAGGACAGTTTCTTTTCTTCCTGCTCATATTCTT 1816212 30 96.7 36 ................A............. ATGAAACATTTTAATTTTTAACATTTCAATACGTCT 1816278 30 96.7 42 ................A............. TCTAATAATTCAACTTTATTTATAAGTCTTTTTTCAATTCTT 1816350 30 96.7 35 ................A............. AATATATAGACCACCCAGTAAAATCATTATAAGTA 1816415 30 96.7 37 ................A............. TTAACATTTACAGTTTTTGTTACTGTTTTAGTTGTTT 1816482 30 96.7 37 ................A............. ATGCAAATTTAATTGCATATCCAGAAAAAAAAACTCA 1816549 30 96.7 36 ................A............. ATAATCGGACAAAAACCAAAGTAATGATGATATTCC 1816615 30 93.3 35 ................A........A.... CTAAATAACTTAAAAGTAAATGATGGAGCTTTTCC 1816680 30 96.7 33 ................A............. ACTTTAAAATTTCAATAATTTCACTGTATGAAA 1816743 30 96.7 36 ................A............. ATCTTTCTTCCATCTAACATTTCAAAAACTTGACTT 1816809 30 96.7 35 ................A............. GAAGAATATAAATTAAATATTTTAAAAGCATTTAA 1816874 30 90.0 36 .....A..G.......A............. AAAGGCAAAGAAAATGGAAATTTACGAGGAAGAGAT 1816940 30 90.0 36 .....A..G.......A............. TAGTCCATATGATAAACTCCAATTTTATGAATCATA 1817006 30 86.7 0 ........A......A....A.......G. | ========== ====== ====== ====== ============================== ========================================== ================== 38 30 98.2 36 GTTGATTATTAACATTTGATGTATTGAAAT # Left flank : ATAAAGCTAGATTGCTATAAATTAATAAAATATATACTAGAAGACAAAGAATTCGAACCCTATTTATTAGAAAGGAAATATTGATGGGGAAAAATTATAATTATGCATTTCTATTCTACGATGTTGGAGAAAAAAGAGTAAACAAAGTCTTTAAAGTCTGCAAAAAATATTTAACTCACCACCAAAATTCAGTATTTAGAGGAGAAATAAGCCCGTCAAAAATTATTGCTCTAAAAAGAGAAATTAAAAAAATAATAAAAAAAGAAGAAGACTTTGTAACAATAATAAAAATGTATAACAAAGAATCCTTTGAAGAAGAAACTATAGGAAAATACAAATCAATAGAAGAAGACCTAATCATATAAATACCAGCAAAAACAAAAGAATTTGAAAAAATAAAGAAAAGAAAAAAATAGAAATAGCTGGTAAAAAATCAAAGAATCTCATAAAATGGGTAATATATTGATAGGATGTATATTTAAAATGTGCATTTTATATTG # Right flank : TGAACTTTTCACTATATAGTTTAATTAAATATATGACATTGTATATTACTTGAAATTTTATTAAAGGAGATATTATGAATTTTATTGAACTTGTGAAGAATCGTTATTCTTGTAAAAATTTTAGTGACAAAAAAGTTGAAAAGGAGAAGCTTGATATTATTCTAGAAGCGGGCAGGCTTGCGCCTACTGCTAAGAACAATCAGATTCAAAGAATTTACGTTGTAAAATCAAATGATGCTCTTATAAAAATTGAGGAGCTTACTCCTTGTAGGTACAAGGCTCCTCTTGTTTTGCTTGTAGCTTTTGATGAGAGTGAGGCTTTTGTTTATCCGGGAGGGAAATATAATACTGGTGTTGAAGATGCTACGATTGTTGCAAGTCATATGATTTTGGCAGCTTCAAGCCTTGGTGTTGATTCTTGCTGGGTAAATCTTTTTGATCCTGATAAGGCAAGAGAAAAATTTTCTTTGCCTAAAAATGAAAAAATTGTTGCAATGATT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTATTAACATTTGATGTATTGAAAT # Alternate repeat : GTTGATTATTAACATTAGATGTATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //