Array 1 782880-782388 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017786.1 Bacillus xiamenensis strain VV3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 782879 32 100.0 33 ................................ TCTCCTTTAGTAGAATTAAAGAATGTGTTAATA 782814 32 100.0 34 ................................ ACCTTGTGTAACGTACAGGTAGTCCATTGGGAAT 782748 32 100.0 35 ................................ GTATAATATTAAGTCTGACAGGCGTTCCAACGCGT 782681 32 100.0 35 ................................ ATAGCCATTGTAGCTATGTTCTTGGTATCAAAACA 782614 32 100.0 34 ................................ TTGATGATATTGGTGCAGAGTATGTCAAAAGAGA 782548 32 100.0 32 ................................ AACAATCAACCGTAAAGTGATATCAGTTAAAG 782484 32 100.0 33 ................................ ACAATTGATATATCATCTCCTCTTAATACTCCA 782419 32 78.1 0 .................C..A.AC..CAC... | ========== ====== ====== ====== ================================ =================================== ================== 8 32 97.3 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ACATGTGTGGATTTAAATTAGCTAAAACTTTGTCGCACTCTATGTGAGTGCGTGGATTGAAATTCGCATACTATCATGTGTAATTGGAGCAAGGGGTGTCGCACTCTATGTGAGTGCGTGGATTGAAATCCTAATTCCATGAATCGTGACTGGAACCTGCTCATGTCGCACTCTATGTGAGTGCGTGGATTGAAATTCTTGTCAGTAAGACAGCTGGAAAGAAATGTTGACAATTGCGCTTGATTTAGGCTTGAAAAACATGAGTCTTTTTAAATGAATTCTAAGATGATCAAGAGCAATAGTTTCTAATTAAATAGGATTAAAAAATTTGGTGCGAATGTAAGGTGAACATAAAATCCTTGGAACATTCGCACCTGTTTATTCGACAAAATTGAGAAAAAATGTATATTTTGTAGAGGGGAAAACAAAATTTGATTGATAATATTGGTGATTTTGACTGTGATTACCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TTCAAGTGCCTATCCAATTCAACATCTACACAAATGAATAATCAACATAATGTACTCTCCCCTAGATCCAAGCCCTACATAACACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCGGTATAGGAATTTTTGATTTGGTGGTCCATGTCGATATGGCAGATCGCGACAAAAGGATAGTGACCTTTGCTGCGGTAGCGCAAATCAATGAACCGCACCTCATAATGATCCTTGTATTTATCTACTTCCCACCGGTAGACAGGGGAGAAGGAGAGAAAGGCTGAAATGTTTTCATCTTGTTTGGCAATTTTCATAATTTCTGTATCAGGGACAGGCACACGGTTAAATGTGTCTAAAATGACGATCTCTCCATTCATACTGCGTCCAACATGGAAGGAGGATTTACATTTCACGGCAATGCGCCATTGTCTGAACTTCATTGTAGGCGAAATAATAATGTCTT # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 783613-783184 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017786.1 Bacillus xiamenensis strain VV3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 783612 32 100.0 36 ................................ AACACAGATGATATTGAAGTCCTTAAAACAGATGCA 783544 32 100.0 33 ................................ ATCCATGAATTTATCATTTTTTAATAGCTCTAA 783479 32 100.0 33 ................................ TAAGGGAGAAACAAATAACATCACAACAGGTAA 783414 32 100.0 34 ................................ CTAACATGTGTGGATTTAAATTAGCTAAAACTTT 783348 32 100.0 34 ................................ TCGCATACTATCATGTGTAATTGGAGCAAGGGGT 783282 32 100.0 35 ................................ CCTAATTCCATGAATCGTGACTGGAACCTGCTCAT 783215 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 100.0 34 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : ATGAAGGAAATCGCTGACCGGCTAGGCGAAACAAGACAAAACATCTCAAACATTCACAAAAAAGCACTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGAAAGAAGACAAAATCACCAATGGAGAAATGGAAAAACTCATTGAAACCTTTACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTGATCGAAAGAGTAGACTGGCTGATTTATCAAGAAGTACCTGGTTTTTGGGAATTTATTGTGGATTATCTAACGAAGTTGTAAAAGAGGCTGATGGTGCGAATGTGAGGTGAACATAAAATCCCCGGAGCATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTTTGTAGAGGGGAAAACAAAATTTGAATGAGAATATTGGTGATTTTGACTGTGATGCCCTAAAAAATGTTATCATTAGGGCAGAAATCGCC # Right flank : TCTTGTCAGTAAGACAGCTGGAAAGAAATGTTGACAATTGCGCTTGATTTAGGCTTGAAAAACATGAGTCTTTTTAAATGAATTCTAAGATGATCAAGAGCAATAGTTTCTAATTAAATAGGATTAAAAAATTTGGTGCGAATGTAAGGTGAACATAAAATCCTTGGAACATTCGCACCTGTTTATTCGACAAAATTGAGAAAAAATGTATATTTTGTAGAGGGGAAAACAAAATTTGATTGATAATATTGGTGATTTTGACTGTGATTACCTAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTCTCCTTTAGTAGAATTAAAGAATGTGTTAATAGTCGCACTCTACATGAGTGCGTGGATTGAAATACCTTGTGTAACGTACAGGTAGTCCATTGGGAATGTCGCACTCTACATGAGTGCGTGGATTGAAATGTATAATATTAAGTCTGACAGGCGTTCCAACGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 3027374-3028005 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017786.1 Bacillus xiamenensis strain VV3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 3027374 32 100.0 36 ................................ TTTCTTCGCACTTTGACCATCACTGGTCAACCTAAA 3027442 32 100.0 34 ................................ ACGAATTGAAAACAATGGTAAAGCTTCTAGCACT 3027508 32 100.0 35 ................................ AAGTTGCACAATTCCCAATGGATTATATCTATGTT 3027575 32 100.0 34 ................................ TACAAACCCATCTAGAGCTATCTTGTTTGCTAGG 3027641 32 100.0 34 ................................ GTGCTGATCATGGTGAAATTGTGGAGACGATTTC 3027707 32 100.0 35 ................................ ATTTTAACGATATGAGCTTCTACCTTCGTTTGTGT 3027774 32 100.0 37 ................................ ATTCAATTTTGCACCTAGACAACCATACAGAACAAAC 3027843 32 100.0 34 ................................ ATCAACACAGAGCCAAATATGGAACGGATACGAA 3027909 32 100.0 34 ................................ ATATGGATAGACCCATTCCCCTGTGCGATCGTCC 3027975 31 84.4 0 ...................-TA....C....G | ========== ====== ====== ====== ================================ ===================================== ================== 10 32 98.4 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : CATTTCTTTGGAAGTAGGGGATGTTTGATATGATGGTTGTGGTTACATATGATATCAGCACAATTGATAGAGCTGGGCAACGAAGACTTAGGAAAATATCGAAAATTTGTCAAAATTATGGCCAAAGAGTACAACATTCTGTTTTTGAATGTATTATAGATTCAACGGAGTTTGCTACAATGAAGCATCAGTTGTTGCAAGCTATCAACGAAGAAAAAGATAGCATTCGTTTTTACCAAATAGGTAACCAATATCGAAAAAAAGTAGAACAAGTTGGGGTAAAAGAAACAATTTTTGTAGAAGATCCTTTTATTTTTTAGGTGCGAATGTGGGGTGCACATAAATTCCCTGAAGCATTCGCACCTAAAAAGAAAGATTTTTCGACAAAATCTATCTCCTTATGTCTCATTAATTGATACTTTGTACAAATAGATGTGTCTTTTTTAACTGATTTTCTTAAAAAGAAGCTGTTTTATTTTGTTTTTTTATTGAAAATCGCC # Right flank : GTCTAACTTACTATTTATGTTGAATTTTTAATTTGATGCTAAATTATCAACCTATGTAAAAAAATAGTAAGTTTGCAATGGGAAAGAAAAGAGGTAATTGAATACTTATTGAATATTTGCTGGAATAAATGTATGTAAAGGAAAGGAGTGTTTCAGTGGTATTGATGAGGTTGATCAGCCTATATATGTTGACAGCGGTTGGTTTGGGATGGGTGATAAACTATTTTCCAGGTTTGATGCTGCCCATCTATATTCTTGCGATAATTGGGCTTTTGTTCTGTCTGGGTCATATTGCGTTCCATTATATTCAGAGAATCAGCATGTTGCTTGATAAAAAATAGTTGAAATGGAAGTCATAAAGATTGTATCTCTCGAATCTAATACCCCCACTATATGAAGGAGGTTTGTTTATTTTTTGATGATCTAGGTGCTGGATGATTTTCTTATTTGATTCTTTAATTTGTCTCAAAAGGGAGACGATATTGCCCGTAAACCCTATG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //