Array 1 3685236-3683987 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGFZN010000001.1 Escherichia coli strain EC-2700 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3685235 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 3685174 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 3685113 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 3685052 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 3684991 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 3684930 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 3684869 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 3684808 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 3684747 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 3684686 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 3684625 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 3684564 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 3684503 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 3684442 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 3684381 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 3684320 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 3684259 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 3684198 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 3684137 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 3684076 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 3684015 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //