Array 1 107053-106026 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR214971.1 Mycoplasma dispar strain NCTC10125 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 107052 36 75.0 30 .GGAAAC.CAG......................... CGTGAAATTGAGTCTATGTTAGACCCAGAT 106986 36 100.0 30 .................................... CTTGGTCTAAAAATGTTCTCTTCAAAAGAC 106920 36 100.0 30 .................................... GAACGTCGTGAGACAGTTCGGTCCCTATCT 106854 36 100.0 30 .................................... CCTAGTGGTTATGAAATTCCAACTGATTCT 106788 36 100.0 30 .................................... TCCAGATTTAAGACCAAATTTAATGATTGT 106722 36 100.0 30 .................................... TTTATCTAAATTAGAATAAAGGAGCAAATA 106656 36 100.0 30 .................................... ACTGACAGAAAATATCAAATCCCGGAATAT 106590 36 100.0 30 .................................... GAAAACTGCTGGACAAAACAGCGCATACCC 106524 36 100.0 30 .................................... CAGTATTTCAAAGACTTTTTTAGCATGATG 106458 36 100.0 30 .................................... CCCTACAGACTGCAGGTATAAACTCTTATT 106392 36 100.0 30 .................................... TTTGGTTTTAATGAAAAGTTTTTAAAACTA 106326 36 100.0 31 .................................... TTTTAAAGACCATAAAAAACCAGGTGACTAT 106259 36 100.0 30 .................................... AAGTATAATTATTTCCTGTTGGAATTTCAC 106193 36 100.0 30 .................................... TCCGGCGATAAAGGAAAATTCCGCCAATTC 106127 36 100.0 30 .................................... TTGAGCAGCGCTTTATTACGACCCGGGGAC 106061 36 97.2 0 ....................T............... | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 98.3 30 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : TGTACAATTTCTTACTAGAGTAAAACTAATTGTTTTAAATATTCGATTACTTCATTGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACCGTGAAATTGAGTCTATGTTAGACCCAGATGTTTTTGTGCTGTACAATCCTGAATTTCCCAGTTACAAACGCATAATTATAAAAGACCTCCTAATTTAGGTGATCTTTTTAGAACTTAACGTTATTTCATAACAATTTTTTCGACTTATAACCCGGATTTTTGTCAAACATTACTAGCAAAATACATTTCTAGTCGCTTTTTATTTTTGATTAGAGGTTATTATGCATTTACAAATCAGGTTTTTTACTATAAAACTAAAAAAGAACAACTTTTTTAACATTTTTATTATTAAAATAATTACATCATAATTGTTATGAAAGGTTAGTACTTTTTTCTTATTATTTTTTAAAACAAATCCTTATTTGTTAGTGTTTTTTGATATTTACAAATTAATTATACCACTAACT # Right flank : GAAGTCATAAGTTTTAATAATTTACGAAAATATTTTTCTTTTTATTAATTTTTGGTATAATTTTAACGCAATACATAGAGATAATAACTGTCATTTTTTTGACTTAATTTGTTATTTGAATGTATCTTTCAAGTATTGCCCCTATTTTTAAAAGAAAGGAGAGCAAAATTGAATAGTTTTCGTAAGAAAAAAGTTGAAACTGTTGCTGAAATTGAAAAGTTACTGACTGATTCTTCTTCGCTTGCGATTGTTGAATACCGTGGACTTACTGTCGCTGAATTACAACAACTACGTCAAGAGTTTAAATCTTCTGGCGTTTTTTCTAAAGTATACAAAAATCGTCTTTTCAAAATTGCAGCTGAAAATTCAGGGTATTCAAATCTTAAAAGCGATTTAATTGGTCCAAATTTATTCGCTTTTGGAACAACAGATCCGATTGCGCCTGCAAAAATAATTGCAAAAAACGCAAAAGAACAACCACTTTTAATTCTCAAAGGTGG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 108620-107461 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR214971.1 Mycoplasma dispar strain NCTC10125 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 108619 36 100.0 30 .................................... CAAACCCCCAACCTAATCTTAACAGCTTTA 108553 36 100.0 30 .................................... AAACATATCACCTTTTACCGTAAACAATTT 108487 36 100.0 30 .................................... TAAAAGTTAATGAATATAATATTGGTATTA 108421 36 100.0 30 .................................... CTATTAAATACAGTAACGATAATAGCGGTA 108355 36 100.0 30 .................................... AATGTTTATGACTTAAACAAAAAAACTTTT 108289 36 100.0 30 .................................... AATGTTTATGACTTAAACAAAAAAACTTTT 108223 36 100.0 30 .................................... TTACCTCCGCCCAGATGGACACACTTGTTA 108157 36 100.0 30 .................................... AGGTAATAACAAAATAAGTTTTGTAACCCT 108091 36 100.0 30 .................................... TTATCCGAGTTTTTATATAGTTTTATCAAT 108025 36 100.0 30 .................................... TATAATCATATTGATATTGATAAATTTATT 107959 36 100.0 30 .................................... ATACTATCAAATTCTTATGTTGAGTATTTA 107893 36 100.0 31 .................................... TAAACATTTCCCCTTTTACCGAAAATAATTT 107826 36 100.0 30 .................................... TAAAAGCGCAGAACGAAACTGGTGCGGTGA 107760 36 100.0 30 .................................... GCAATAAAATCTGGGTACACCTGCTTAATA 107694 36 100.0 30 .................................... TAAATGGTTTCAGAATCTATTTCACTCCCC 107628 36 100.0 30 .................................... AATTCAGAATTATGATAACTTTGCTGTTAT 107562 36 100.0 30 .................................... TAATTGTTTTAAATATTCGATTACTTCATT 107496 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 18 36 100.0 30 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : CTAAATTACGAAATTGATAATACTAAATTGATCAAGGCAGTTTTTAGTGTTGAAACTGACATCTTAATAAATCAGCATAACTTTGAAAATTTAATTAATATTATTTTTAGCACTATGAAACATACGCTTATAATTTTAAAAGATCTTGACTATATAAAATTAGATAAACTTTTTAAATATTCAAGTCTAACTTTTTTAATATTAACTAATGATTTTACAAAATATATTTCAAAATTTAGTGAACTTGAACTGATTTCATTTTATTCAAATAAAACAGTTGTAGATGTTATTGATAATTTACCGATAATTCGCTACTTTGAAAATATTAAAAATAGTCCAATTGATGAAAATGAGTTGATTTATAATTCTGAAGAGGAAAAATTAGTTGCAAAATTGGATTTTTACAAGATAAAAACTAGTTTTTTCAAGTAACCACATCTTTCTGAAGTGATTTTTGGCTTAAAAAAAGAAAAAAAATTACCTTTTTTCTTGTAAATGAG # Right flank : CGTGAAATTGAGTCTATGTTAGACCCAGATGTTTTTGTGCTGTACAATCCTGAATTTCCCAGTTACAAACGCATAATTATAAAAGACCTCCTAATTTAGGTGATCTTTTTAGAACTTAACGTTATTTCATAACAATTTTTTCGACTTATAACCCGGATTTTTGTCAAACATTACTAGCAAAATACATTTCTAGTCGCTTTTTATTTTTGATTAGAGGTTATTATGCATTTACAAATCAGGTTTTTTACTATAAAACTAAAAAAGAACAACTTTTTTAACATTTTTATTATTAAAATAATTACATCATAATTGTTATGAAAGGTTAGTACTTTTTTCTTATTATTTTTTAAAACAAATCCTTATTTGTTAGTGTTTTTTGATATTTACAAATTAATTATACCACTAACTGGGAAACTCAGGTACAATTTCTTACTAGAGTAAAACCGTGAAATTGAGTCTATGTTAGACCCAGATGTTTTTGTGCTGTACAATTTCTTACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //