Array 1 189304-191388 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIKW01000001.1 Anabaena sp. UHCC 0204 scaffold1_cov0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 189304 37 100.0 35 ..................................... AATCGGTGAGAAGCACTTATAATTGCTTCTCTGAT 189376 37 100.0 36 ..................................... TCAATAGAGAACCCAGACTTACCAAACCGGGATTTT 189449 37 100.0 34 ..................................... AGCGTAGGAAAAGCTAAATCCTTTGCTCCTAGCG 189520 37 100.0 33 ..................................... GTCGCAAGGTACGACTAAAATCTTTCTTTCTAC 189590 37 100.0 38 ..................................... ATGTATCAGATAACGATCTATTGATTGGTTTATTTGGA 189665 37 100.0 42 ..................................... GATTTTTATGATCAGGTTCTTCCCAGGCTCTGTCCGAGAGCA 189744 37 100.0 38 ..................................... CGAAGCTCTCAAGGATTTAGTCTGTGAACCAGATGCTA 189819 37 100.0 38 ..................................... ACCCTGATTTTCTCTAACAGTATGTGTAAATTATCAAT 189894 37 100.0 39 ..................................... AATAGTTCCAGGGAATAGATAATGCTGTTTATCGTGGTA 189970 37 100.0 35 ..................................... CTCAATCAGTCGGGATGCGATCGCTTTCTGTAAAT 190042 37 100.0 34 ..................................... CGGCTTGTAGGGATACAGCCGCATCTTCCAGAGC 190113 37 100.0 34 ..................................... TCCACGGTAACACTAACTGCTGGGACAGAAGATG 190184 37 100.0 36 ..................................... AGAGAAGTATGCCGTTGTTCGGGGCAAGAATGGATA 190257 37 100.0 33 ..................................... AACAAATGAAGTATCTACAGGCTTCTCTTCTCT 190327 37 100.0 39 ..................................... CCGACTCAGTGAATATGGGCAAGAAAGATCAGTCTTGAG 190403 37 100.0 34 ..................................... TGAATGATGTGCATGACATCAATGAATTAGACAA 190474 37 100.0 34 ..................................... TTATATCCTCCAATAACTTCCACGCACAAAAAAG 190545 37 100.0 39 ..................................... ATGCTTAGGACGCAAGATTAAATTTTAACTTTGGGCTAA 190621 37 100.0 36 ..................................... TTTGCGTGACAGGTTGTATTTGATTACAGGCTACTA 190694 37 100.0 35 ..................................... TAAGTTGATCAATCTTACTTTAGGAGTCTAATATG 190766 37 100.0 38 ..................................... CTTACAAATATTTAGCTCCAAAAGGAAATGGCGATCGC 190841 37 100.0 32 ..................................... TTTTCTCTTGTAAACCGTTTCAAACTCGGACC 190910 37 100.0 35 ..................................... GAATGGTAAATTGCATCTCCTAAAATGCTGGGTAA 190982 37 100.0 35 ..................................... CCGTAATTTTCTTGATGGTCGCAGTAGCAACACCA 191054 37 100.0 41 ..................................... GAAAATGTATCCCAACAGCCACTTAGCGTAAAATCTTCAAA 191132 37 100.0 34 ..................................... ATCTTCCTTTTTTTCTACAGGTTGACACACCCGG 191203 37 100.0 41 ..................................... CTATTGTTTTTTCTGCCATGATGAATTATTAATTAGTAGCG 191281 37 100.0 34 ..................................... GATGAAGCTACTGCTTGGCTACCTTGGGATTTAA 191352 37 91.9 0 .............A..A...............A.... | ========== ====== ====== ====== ===================================== ========================================== ================== 29 37 99.7 36 ATTGCAATTTCTACTACTCCCTATTAGGGATTGAAAC # Left flank : TGTAGAATGTTGTCTCCTGTTGTTGAAGAAGTAGCGGCAGAATACGACGGACAGGTAAAGGTGGTGAAACTCAATACTGATCAGAATCCTACTGTTGCTAGTCATTATGGAATTCGCAGTATTCCTACTTTGATGGTTTTTAAGGGAGGACGACAAATCAATACTGTTGTTGGTGCTGTTCCTAAATCTACCTTATCTGCTGCTTTAGATAAGTATGTTGCTGCACAAGCTTAGTTAAAGATATGGGGAATTTCTGTAGTAAATCTGTTTTTCTGCGCGAGTGGGTGGGTGTAAAAAATCTAGGTTCAAAAAAAATGGCTGGAATTATTTCTCTGCAAGGCTTTCATGGTGTTTCTGGTCTTCACGTTCCCGCGCACCTTATACAGCAAGGGTTTCGGCTATTTTGCCCCTTGACACTTTTTCCCAAATGCACTATGATAAGACCATCCGCGCAACCGAACCTTGAAAACCAAATACAGTCAGGCTTCCAGCGCCCCGCT # Right flank : CGCCAAAAAATTCTTCCTTCTCAATCCTCATCTTAGAAGTACGAATTCATTGTCAATTGTCCATTGTCAATTGTCCATTGTCAATTGTCCATTGTCAATTGTCCATTGTCAATTGTTAATTGTTGAACTCCGTACAAAAAAGCGTTAACCTAAGCGCATAAGACTAAATACAGGAGAATCCCGTGAATTCAAGCACCCAAATCAAAGCATTAGACGTACCCAGCGCCATTTTACAACGTCGTTCCATCAAAACCTTCAAACCAGATCCCATCTCACCAGAACTACTCAAACAACTAGTAGAACTAACCGTAGCTGCACCCAGTAGTTTTAACGTCCAATGTTGGAGAATCGTATTAGTTCAAGACGAAGCGCAAAAAACAGCATTATGTGCCGCCTCTTGGAATCAAAAGCAAATTATTGAAGCACCAGTTACCTTTGTATTTGCTGCTGACGCTGCTGCGGGAGAACAAGATATAACACCCATATTAGAACAAGGTGCA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCTACTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 42635-43174 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIKW01000025.1 Anabaena sp. UHCC 0204 scaffold25_cov0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 42635 37 100.0 34 ..................................... TTACGCGCCCATTGAAGTAACAGAATTCGAGCTA 42706 37 100.0 39 ..................................... GGCTTTTGCTCTCTGTAAAGCTCAAGCATGGCTGCATAG 42782 37 100.0 34 ..................................... TCAGTAGTAGTGTCAGGTACAACAGTGCTACCAT 42853 37 100.0 35 ..................................... GGGGTAAGAGAAAGCAAAACACACACACAGACCAA 42925 37 100.0 33 ..................................... GCCATACACTACCAACGGGAGGATTTGAGAGCA 42995 37 100.0 34 ..................................... TTTAATTAATATTTTGTGGGGTCTACAGATGCGT 43066 37 100.0 35 ..................................... AAGTGATGCCATTTAAAAACACAGGAAAAATCTTA 43138 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 8 37 100.0 35 ATTGCAATTTCTCTTACTCCCTATTAGGGATTGAAAC # Left flank : TATGAATGTTGTTGTTTCTTACGATATTTCTGAGGATAAGCGCCGTACTAAAATCCATAGTATTCTCAAGTCTTATGGACAATGGGTGCAGTATAGTATTTTTGAATGTCAGTTAACTGATACTCAGTATGCTAAACTGCGATCGCGCCTCAATAAGTTAATTAAGCCGGAAACTGATAGCATCCGTTTTTATTTTCTCTGTGCTTGCTGTTTTGGGAAAGTAGAAAGAATTGGTGGTGAACAACCCCTTGATACGACGATTTTCTTTGCTTAATGCGCGAGGGGGTGGGTGTAAAAAATCCAGTTTCTCAAAAAATGCCTGAAGTTATACCTACATAAGGCTTTGATGGTTTTTTTGGCTTTACCCTGCCGCGCACCTTACACAGCAAAGGTTTCAGCTATTTTCCCTCTTGACACAATTTCTGAAATGGACTATGATAATAAGTGTCGCGCAACCGAACCTTGAAAATCAAATACAGTCAGGCTTCCAGCGCCTCGCT # Right flank : CATCTATTGCAATAGATTTTTTTGGTGAAATTCTACCAATTGTAATTTCTATGGAAATCTTGCCCGCTAATGGTCAAGGACAGGCAAGATTGCCCATCCCACAAAATTGAATAATTTATTTTTCTAACGTCGGTATTCCTCGTCTGCGGGGTCGCCATAGGGGTCTTCACTAGCTGGGCGGACATCACCGTAATATGCAGAATCTGCGGGGTCGCCATAAGGGTCTTCACTGGCTGGGCGGACATCACCGAAAGATGCAGGATCTGCGGGGTCGCCATAAGGGTCTTCACTAGCTGGGCGGACATCACCGAAAGATGCCGAATCTGCGGGGTCGCCATAGGGGTCTTCACTGGCTGGGCGGACATTGCGATCGCGATATTCGGTATCTTGCTCCGATTCATCTGTCCCTAATAGAAAATCTTTAGCTTTTCGCAAAAAGTTATTTACCATTACTGCTCTCCATCTCACGCATATTCATCTCATCGCCTCCCTGGTAGGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCTCTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 16812-16484 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIKW01000003.1 Anabaena sp. UHCC 0204 scaffold3_cov0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 16811 37 97.3 34 .......T............................. CAAAGTAGTAAAGGAGACAGTAAAGATGGTTAAG 16740 37 100.0 36 ..................................... TTCTGGTTTGTACTCTAGAAGCAAAAGTATTTGCAA 16667 37 100.0 35 ..................................... ATTCCATTCCTTTTTAATTCCCGCTAAATTTTCAG 16595 37 100.0 38 ..................................... TCTGTTGTTAGTTTGAGTGGTGGTCAAGGGAAAAGCTG 16520 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 5 37 99.5 36 CTTTCAACCCGCCCCACTCCGGGAGGGGTGTTGAAAC # Left flank : AACAAATGTTTTTCTGCACCTTTGCATAGCCGTGTCACAAGGAATACAGAATTGAACTGTACCAAATATTTTTGCATGGATCTACAGCATGGTGGCTAGTTTTGCTGATTTTTGGCCGCCAAAAAAATATTTTGCTTACCCTCTAGACAAATCATTTACATGAAGCTATAATATGAAATCGGTGAGGGAATAAAAAACCTTCTTACCAAATCCGCCAGCATAGCACAGTGGTAGTGCATCCGACTTGTAATCGGAAGGTCGTAGGTTCAAATCCAACTGCTGGCCTTATTTATTAAATAATATTTGACTGTCACTTGACAAATTATTTGACCGCGTTGACAAATTGGTGTCCGCATTGCCAAATTGGTGTCCGCATTGCCAAATTATTGTCCCTCACGGTCAATAGTTTGTTTACTATTATAAGCTCTGTCCAAATTAAACCGACGACCTTCCGATCTTTCAACCCACCTAAAAGTTTTTTAATATTCTTGCATAAACAT # Right flank : TCCGCCCGACCAAACCCTTATCTAGTGACACTTCCAAAAGCAATTTTGGCGAATGTCCTAAATTTGCTCTAAATTTTCCTCTTAAGGGAACATTATCAAAGCATCTTGACATCTGAAACACAGACTAGATAAGGGATTTGGACTTTTGGCAGAACCCCCAGGTAAATTGACCTCGCTTATGGTTCGCCAAAAATAAATAATTAAGGTGGATTCCTCCTTGCTCGGAGGTGATTCGGTAGCCACCACTGCGGTAAACCCGCACCTCTATTACTGGGGGCGCACCTTATTCCTGTTCACTAGGAACAGCAGCTTCAAGGTGGGCAGCTACCAGGGTCAGAAAGCAAGACTGTCTCACAACAGTCAAACTAACCCACATTTATCTCAGTTCAGAGGTTTATCAAAAACATGAACTGCGGCGCTATTGTTGATTACTATTATATTTTCAAGGTTCGGTGTTTTGTCAATCAGGCTTTTCGAGATTGATAGGCGTTTTTTGCTAA # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAACCCGCCCCACTCCGGGAGGGGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.60,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 4069-3668 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIKW01000033.1 Anabaena sp. UHCC 0204 scaffold33_cov0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 4068 36 100.0 35 .................................... AGTCTGAGCAATAGATGGGAAAATCGAAGCAAGAA 3997 36 100.0 36 .................................... CCTCATAAACTTCTTTAATCGAGAGGGTGCTGGCAA 3925 36 100.0 37 .................................... AATTTTTCATCTTGCAAACTAGCCCTGTATGCCATGA 3852 36 100.0 38 .................................... ACTGGCACGGCGAAGTACAGTTTATCTGCTAAAATTTC 3778 36 100.0 39 .................................... GGTGTTATTACATCGTTCATTTTGTGATCAAAAATGCGA 3703 36 91.7 0 .............................C.A...G | ========== ====== ====== ====== ==================================== ======================================= ================== 6 36 98.6 37 CTTTCTAAACCCACTTCCCCGCAAGGGGATGGAAAC # Left flank : TCGTTTCATTTTTGCTGAAGACGTATAAGCTGATAATTGATAATTGACAATTGACAATTATCAATTACGAATCATCAAATAAAATCATGTTTACCATGGACATTCAAGTAAGTAGGACTATTGCTTGTAGGGTGTGTTAGGGGATAATTCGGTAAATAAACTGATTGTCTCTAAGTGACGCACCTGGCAAGGTTTTTATTATTGTTTCTTGCTTACTGCTATAGTACAAATTCGATTCATTAAATCGAATTTATACAATAAAATTCTTGACTCTTCTAGTTGTTAAGTAGTAAACTTAGATTGGTGGGTTAAATTTTTTCGACACACCTCCCCCGAACCTTGAAAACTCTATAATTTCGTTGAAGTGTGTCGAAGTCTTGCACACTAAAGGTTTTAGCCTATAAAATTCGCCACTTTGTCGGAAAATTTTTCCATTTTTCTGAGGTGTATCGAAATGGGTATCTGAAACCCCTACCCAGTAAGCTTTCCAGAAGTGAACC # Right flank : TTTACTTGACAAAACCTATTTTTTGAAGGTTTGAGATTAAATGATCATGGTGGAATTTGTTGGCACGACAACCTACAATTGGGGAGAAAGGTAGAAAAATCGCAAGATGTAATCAAGAGTAAAATTGCCCAAAACCTCTTAACTATTGCCTGTTTCCTCCTAACTGTCCATAAGCACAAATCTCCACACCAATCTACTGACTATTATGTTCACCATTGACATTCAACAAGAACAATACAAAACCTACATCCTGTCTGATAAAACCGCTGGTTCACAGATAGAAGTTGTTCCAGAAAGAGGCGGTATCATCACTCGTTGGCGAATTAATGGTCAAGAAATATTCTATTTAGATACAGAACGCTTTACTCATGCTGATTTGAGTGTTCGGGGTGGTAATCCAATTTTGTTTCCTCTTTGCGGTAACTTACCTGATAATACTTACAGCATCGAGGGAAAACAGTATACTATTAAACAACATGGCTTTGCGCGGGAATTGCCTT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTAAACCCACTTCCCCGCAAGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 1 92242-90540 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIKW01000014.1 Anabaena sp. UHCC 0204 scaffold14_cov0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 92241 37 100.0 34 ..................................... AGACATTTGAGGGGCTTCTATCAGATTTAATTGA 92170 37 100.0 36 ..................................... TTTGTGTTTGAAAATGTGACTGGCATGGTCAAGGGT 92097 37 100.0 40 ..................................... TAGTGTAATCTCATGCTTTCGATTGGTTAATGCTTGAATA 92020 37 100.0 34 ..................................... TTCCTTGACTTATTTACTATCTCACACTAGCTAA 91949 37 100.0 33 ..................................... AACTTGGGGTAGGTTTTCGACGCAAACTTTGGT 91879 37 100.0 35 ..................................... TTTCAATACATGAGGCTTGATATCTACATTTAGTT 91807 37 100.0 34 ..................................... TTCCGCTAAGGCTCACACCAAGACTGACTATAAT 91736 37 100.0 34 ..................................... CTTCCTCCCAGAGGTCGGGGAGGCTGGGAAACAG 91665 37 100.0 34 ..................................... TGTGGCTATAAGTTTAGTGCCATCATAAAAAATA 91594 37 100.0 41 ..................................... TGATTATTGACTTTTGATTTTAATTCCTCTATTTGGATAGA 91516 37 100.0 34 ..................................... TCTACTAAAACAGCTAATGGTAGAGTCTGCCTAA 91445 37 100.0 34 ..................................... TTAATTTTTCATGAATAGCAAACATATCAACAGA 91374 37 100.0 32 ..................................... ATTTTGGGATTCATTTCGACGGCGGAACTACG 91305 37 100.0 37 ..................................... ATAATCTATAAAACTATACTGAATTTATATAAGCAAG 91231 37 100.0 33 ..................................... TATAATAGTAAGAGCTAAAGAGGTGGACAATGC 91161 37 100.0 34 ..................................... CAATGAGTTCATGGCGAAGTAATTTTAAAATGTT 91090 37 100.0 36 ..................................... TGAGCTATAGTTCGGACATCATCATACTCGTAAGAG 91017 37 100.0 35 ..................................... CTCTTTTGTTTGGGATTTATCCGTAGTAACACTAA 90945 37 100.0 40 ..................................... ATTATGTTATAAATCCTGCATTAGGATGTACTCATGGGTG 90868 37 100.0 33 ..................................... AGTTCAAGATAGGTTGATTCCTGAATTAAAGGA 90798 37 100.0 36 ..................................... TCAAATTCGGACCACTCCAAACACCAAAATCGGTGC 90725 37 100.0 35 ..................................... GTGCGATCGCAATTTCCATTAAATTATTCAAATTA 90653 37 100.0 40 ..................................... AACCGCTACAGCCAAATCGTCAGATATTTACTCAAAAGAT 90576 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 24 37 100.0 35 ATTGCAATTTTCACTAATCCCTATTAGGGATTGAAAC # Left flank : TGACTGAAGAAGGGCAAATGTTACCTATTGATGAGATTTTTGCCCAAGGATTAGATTTGTTACAGGTGGAAAGTTTACCGCTGTCATAAAACTTGGTGTTGATAATACGTGATATTATACGTTAATTTGTGGTTCTAAGCATTTAGTTGTATCATGGTTTAAATATTCCTCAACTATTTATATTCATGATTTTCTAAAATCGCTATGACGGATCACCGTTTTATTTTGGAACAGGGGTGAGTAACTACGAAATCAGACTCTTTTTTTGGTTTTGTGCGCGAGGAGGTGGGTGTAAAAAATCCATTTTCTCTCAATTTGGCTGAAATTATATCTACATAAGGCTTTGACTGATTTTTTCTATCTACACTCTCGCGCACCTTACACAGTAAGAGTTTCGGCTATTTTTCTTCTTGACACTTTTTCTGGAATGGACTATTATGATATCAGTCGCGCAACCGAACCTTGAAAACTATATATACTCAGGCTTTCAGCGCCCCGCT # Right flank : GGGATTCGCATATGTGCAGGAGTAGATGAAAGAAATATCTCGTTCCCATACAGAGTATGGGAATGAATGTTAAAAGGCTCTGCCTTTTATTTTAAACTAGAGTCAGAGACTCCTGATAGCATTCCCAGTCTGGAGACTGGGAACGAGATAACAAGATATTTATGATGTTTTACTATAAACAAAAACCGGAACTCTTTTATAGGCAGGTGTGCCACTTTTTGGATCTATTTCTGCTTTAAATAAAATATTTGCTTCAGGATAAAACATAAAAGCTACACCTTCACGAATCGCACCACAAATAATTTCAATATTCTCTAATTCCCCTGCATTTCCTTTAACGATAACTCGTTGATGTTCCTGAAATCCTGCTTTTTTAATATCCAAACTATTCATTAAAATACAATGACGATGGGGCATATTTCTATATTTATCTTCACTGCGATAAACTACAGTATTATGTTGTCCATAACTGCGTCCTGTTCCCAATATCAATACAATTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTTCACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 244217-243448 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIKW01000009.1 Anabaena sp. UHCC 0204 scaffold9_cov0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================== ================== 244216 38 100.0 34 ...................................... TGGTGATACGGCGATCGCCACTCAACACTTTAGT 244144 38 97.4 35 .....................................C TTCGCGGCTTTATTAAGTTCTTTGAGAACGGGATC 244071 38 100.0 31 ...................................... ATTACTGAAGATGACGGACGATATACGGAAG 244002 38 100.0 35 ...................................... ATTAGAACTACTTAACTAAGCATTATAAGCTACAA 243929 38 100.0 32 ...................................... TTGAAACTCAACGCCGCGAATTATCTAGGGAG 243859 38 100.0 38 ...................................... TGAGTAATAAAAGCAACTGTATACAGATTCATCAGCTG 243783 38 97.4 40 .....................................T TAACGATCGTCCTAATAAATACGCCATATCTATAAGTGCG 243705 38 100.0 34 ...................................... CGTCGGGTCTAGGTGATTTACAAGAAGAAATCAG 243633 38 100.0 38 ...................................... GGTAACTTATATTTGATACCTTTAGTCTTCAGCGTGAA 243557 38 100.0 35 ...................................... AAAATCAAACTAATGCAATTACTAATGTAAATAAT 243484 37 92.1 0 ......G........................-.....C | ========== ====== ====== ====== ====================================== ======================================== ================== 11 38 98.8 35 GTGACAATTACCAACAAAGGTGATTGAGGATTGAAACA # Left flank : GTGTGTCTGAACGTGATTTAGAATTGTTTTGGCAAGCTTTAATGAAGGCTTGGGAATTTGACCGTTCTTCTGCACGGGGTTTTATGGCTTGTCGTGGTTTGTATGTTTTTAGTCATGCCAGTAAATATGGTAATGCTCCTGTGCATGAGTTGTTTGATAAACTAAAAATAGAATCTACTGTGAATGTACCCCGCAGTTTTGCTGATTATCAAGTGGTGTTTGATGATGAATTGAAACTACCTGATGGTGTAACTTTGACAAGGTTGGCTTAAAAATGCGCGAGGGGGTGGGTGTTAAATCGAAGTGACTATGACTAAGCTGGAAACTCTTGCACTATCTGGATTTCAGGTTATGGGCGATCGTATACCCTCGCGCACCTTGCACTGTAAGGGTTTCAGCGTTTTTTGCTCTTGTGCTGTCGGCTGGAATGGGGTATTATGGGGTGGCTCGCGCAAATCTGTCTGGAAATCCTTTATTTCCAAGGGTTTGAGAGGTCAGCA # Right flank : CAAGACCCCCGATAATTCTTATATCCGCACAGCCAAACGCGGAAAACATAAAATATTTATTGGTATGGCTCCTGGTGTGGGGAAAACTTATAAAATGTTGGAGGAAGCACATCAACTTAAACAAGAAGGTATTGATGTTGTCATTGGCTTTTTAGAAACTCATGGACGCAAAGACACGGCTATAAAAGCTATAGGATTGGAGGTAATTCCTAAAAAAACTATTCTTTACAAGAATATCAACCTCGAAGAAATGGACACCGAGGCAATTTTAAATCGTTCTCCCCAACTGGTTTTAGTTGATGAATTAGCTCATACAAATGTACCTGGTTCACATCGGGAAAAACGCTATCAGGATGTAGAATTAATGTTAGCAGCAGAGATTGATGTTTACTCTACTGTTAATATTCAACATTTGGAAAGTTTGAATGATGTAGTCGCAGCAATTACGGGTATTGTGGTGCGGGAATGTATTCCCGATATTCTCTTAGATGAAGCTGACG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACAATTACCAACAAAGGTGATTGAGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.50,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 95512-93994 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIKW01000008.1 Anabaena sp. UHCC 0204 scaffold8_cov0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================== ================== 95511 37 100.0 40 ..................................... AAAGTAGAAGTAAGATTAGGAAACTTTTCTTTTAGTTCAG 95434 37 100.0 40 ..................................... TCTAGTTTATATAAGGTGTCTACAATGCCAGAGTTTTGTA 95357 37 100.0 47 ..................................... TCTAAACCATTGCTGGTGAAGAAGGTAATAGCTTGGTTGGCAGCTTG 95273 37 100.0 38 ..................................... AACACAGTTATCTCCTACTTTTAGGTGCCAGAACTTAA 95198 37 100.0 50 ..................................... CTAGTGCTACCTGTAACAGATGTTCATTTTTTCTACCTTCTTGATACATC 95111 37 100.0 45 ..................................... GATAGCGGATAGTCAATGTCATTCAAGTGCATAGCAGTCAGGTTT 95029 37 100.0 38 ..................................... AGTCTCTACTCTAACTACCTGCAATGATATCAGATAAC 94954 37 100.0 50 ..................................... TTTATTGTCTTGTAAATAACATACTTCTTTGTCCCTACTTGTAGCTCTCT 94867 37 100.0 37 ..................................... GCGGCTCTCCATATCAGAGAGTTAAATATTCCCATGT 94793 37 100.0 39 ..................................... CGCTTTTCAAGTGCATCTCGTAATGTTGCTATTAACTCA 94717 37 100.0 38 ..................................... GAAGCTAAAGTTAGAGGTGAAGTTTACGGTAGAGAGTT 94642 37 100.0 38 ..................................... ATTCTTACATAACCTCTACATGGGTTTTCATAGCAACC 94567 37 100.0 38 ..................................... AAAGTAGCCAGCCATGTAAAGGTTCATATCTTCTTTAC 94492 37 100.0 41 ..................................... ATGATTCATCATGAATTTCTCTATTAGTCATAGTCATGAAA 94414 37 100.0 42 ..................................... TGAATCAGTAAGACATGCTTCAAATGTTTGTATTTCACACCA 94335 37 100.0 37 ..................................... CGTTCAAAACGTCTCTAGCTCCTATTTCCTTATTACG 94261 37 100.0 40 ..................................... GTTATCTAGGCTTGTTAGGCTAAACACACTATTCTTGCAA 94184 37 100.0 37 ..................................... TCTTGTAGCCTACAGGTAGTTGCCCTGGTTTCTCAAC 94110 37 100.0 43 ..................................... TCTCTCACGTCCAACCCTGTTTTTACGTTAGAGTTGAAAACAA 94030 37 97.3 0 ..............................T...... | ========== ====== ====== ====== ===================================== ================================================== ================== 20 37 99.9 41 GTTTTTCATGACCTTTTCCCCGCAAGGGGACGGAAAC # Left flank : TGGATGATAAGGAGTTGAATTACCAGTTGGAAAAAAGATGGTTGAAGGTTCTTAAGTTGAGTGAGGATAATTTACGGGTATATCCTCTTGATGAAACTGCTAAACAGAATACACGAGTTTTTGGTAGTGATCCTCCTTATCAACCACCTGATTATTTAATTTTGTAAAGTTGAATGTTGGATGTGAAGGGGGTTAAGGTTGCTTGAAATACCCGTGTGGTAAGGTTTTGGGCTATTGTAACGAGATGTAAGGAATTGTCTCTAGTTAGTCGTATGAAGCTACACAGATTAATTGTTAGTAATGTTTTGTAATATTGAGGAAATGTTGGTTTTTAGGGTTGACATCTTGGGGTTTTCGTTTTATTATGACTGTATTGGCTGATTTCGGCTTTCTGAACCTAGAAAAAAGAATACTAGCATTTTAAGTTACACGGCTGTTTCTGTATCCGTGTGCGATCGCTTCCTGAAATCCGTATGTCGTCAAGTTTCCAATGGTATAGG # Right flank : CTGTTACTATTTCAATAATAAAATGGGTGTCCTCTCGTGTCACATATAGCAGTTATTGGTCGGATGAAATACAATGGAGGGCGGGGAAACCCCACCCCTACAGGTTTTGCGATTTAATGACTGTATCTCACAAAGAGTGAATACCGCTTTGTTATTGACAAACCGCAGATGGTAGAAAGATAGATTTGGGTAGAATATTGTGTAGTATCAAGCCTGGGGACAAAAACCAAAATCAAAACATTGCCCAAACTACATATAATTAATGTATTATCTCAAAAAGAGATAGGCGATCGCACTAAATAACAGAAATTGCTAATTAGAGAAAATGTCAGAATCAGGTGGTTATCGAGTTTCGACTCCGCTCAACTACCGCGTAGTCGAGATAATATCCAGAATTTAAGGAGGTAGAGACGTTCCATGGAAAGTCTCTACAAAGGTCTTGAACGTATGCAAAATTATTTTCATCCCTAAAATCAGCAATGCCATTATCAGTCAAACCA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCATGACCTTTTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //