Array 1 157129-158438 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGS010000046.1 Klebsiella spallanzanii isolate SB6411, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 157129 29 100.0 32 ............................. CGCAACTGGCCGTCAGTCACGCGGAATAATGA 157190 29 100.0 32 ............................. GCGTTGTACGAGGATGGAATGCTCGAAATTCC 157251 29 100.0 32 ............................. GCGTTCAACTGGTCAATCCATGCGATCTCTTT 157312 29 100.0 32 ............................. CTGACAGGAGGCATTGTGGAGGCTCAGACGAT 157373 29 100.0 32 ............................. GCCAGACGTGGCCCAATGAATTGATCCGAATT 157434 29 100.0 32 ............................. CCACGGATTGGCACTGGCGGAACATCACCGCA 157495 29 100.0 32 ............................. ACCAGATTGCGGCGGGCCTGGAATTTGTGATG 157556 29 100.0 32 ............................. TTGTCTGCCGCCTCATCAAATACCGCCCTTGA 157617 29 100.0 32 ............................. GTCCATGAGTCCGGAGGCCTCTAACCAGTCAT 157678 29 100.0 32 ............................. TTCACTTTCAAATTTGCGGGCATCGTCCGTAC 157739 29 100.0 32 ............................. GCTCGCGAGGTCTGCGAGTTCAGAGAACGCGG 157800 29 100.0 32 ............................. GCGGATGACAAAATTAGTGTGACGTCAGGTAT 157861 29 100.0 32 ............................. GCGACCAGCACCGGAACGATCACAATGTGTTC 157922 29 100.0 32 ............................. CCTCACCTTTATCATTAAATATTAATAGCCTT 157983 29 100.0 32 ............................. GCATTTTCGCCTCGTCTGCGCTCGCCGTACTG 158044 29 100.0 32 ............................. TCGGATCGCTGTTTGTTCTGACTTCTGGCGGT 158105 29 100.0 32 ............................. CACCTGGTTCTTATATTACCTTTCCGGCTGCA 158166 29 100.0 32 ............................. CTTGAACATCCGCATCATCAGCTGGTGGCTAC 158227 29 100.0 32 ............................. TTTACGGATATCTTCGACGCGTTGTTCTGCAT 158288 29 96.6 32 .................A........... CAGCAGGTCTCCGCCATGCCATGCAATGAGGG 158349 29 100.0 32 ............................. TCTACGATGCAGACACAGTCGTGTTTGAAGTA 158410 29 96.6 0 .............G............... | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACTGCCGTTATCTCTCATCGTTCAGGCGAAACTGAAGATGCTACCATCGCTGACCTGGCTGTTGGTACCGCTGCAGGCCAGATCAAAACCGGTTCTATGAGCCGTTCTGACCGCGTTGCTAAATACAACCAGCTGATTCGTATCGAAGAAGCTCTGGGCGAAAAAGCACCGTACAACGGTCGTAAAGAGATCAAAGGCCAGGCATAAGCCTGAACTTTCGTTCTGATATCAAAACCCGCTTCGGCGGGTTTTTTTGTGGCTTCTGTTTATTGATAATCTGTCGCATACGTTGTGTTGTGTATGTCTATGGGTAGAAATTTTTAACAGTGGAGTAGAAATCACACTAATTTGGTAGAATTCAAGAAAGAATAGTTAGCTTACTTTTTATGATTTAAAATCAACTGGTTAGATGTTCTTTAATAATGCGTATTTGTAATGATTACGTTGGTAGAATGTTGTTATGAGAAAAAGTTTTTTATAAACATATAGATATGTTTAGA # Right flank : GGTATCACTACCAACGCCCGGATGCGCCGCCTCCCCCTGAAGAGCCGCCGCCGCCGCGAAAACCGCCGCCGGACGATGAGCCCGAAGAACCTCCGCCCCCGCCAGACTTAAATCCGCCGCTGAGGACAATAATGACAATGACCACGACGGTGAGAAGAAATTCTGCGAAGCGGCTTGCGGCATTTTTCAGCCATTCGATATCCAGGTAAATGAGCAGGACGATTAATGCAGCAACGACGGAGAAAGCCAATACGATAAGCACTGTCTTTTTCCTGTTTTTGGAGACTTCAGGTGAGTCCAGACCCGATGACGATTTGTGATGTTTTTTTCCTGCTTTGGATGATGCCTTCTTCTTTTTGCCCTTTGCGCCGCCGGTGATTGATGTGATTAACATGCGGCCGCTAACGACAATATTCTTCAGTCGGGACCACAATGGCAAGGTTATCAACAGACATAAGCTAATGTTCCCGACCTGGTGAATGATAACGTCTTCCCGCAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 187100-188206 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGGS010000046.1 Klebsiella spallanzanii isolate SB6411, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================================================================== ================== 187100 29 100.0 32 ............................. GTGGTCAACACGTCGCCGCCGGTCGCCTTTGC 187161 29 100.0 32 ............................. CCACCGCGAACCGCCAGCCCAACCGGATCGCC 187222 29 100.0 32 ............................. CGAAATTGCTCGATTGCTATTGCGCCTCGATA 187283 29 100.0 32 ............................. GACTATCACAAATACGACGCTATCAGCGTTAC 187344 29 100.0 32 ............................. CTCTCAGGGTACATTACTAAATACCCTAAATA 187405 29 100.0 32 ............................. ATTTCATGATGTAATCACCTTCTGTCGGATAT 187466 29 100.0 32 ............................. GCATCGCTACGAAAGTGCGCATTGATGCTGGT 187527 29 100.0 32 ............................. TCCTCTGCCGAGTCTTTCATTGATTCATACAA 187588 29 100.0 32 ............................. CTTCGTAGGGCTCGTTGACCTCGATAACCGGG 187649 29 100.0 32 ............................. ACCATAAAGAACCGCTTACGAATCGTCGGCGC 187710 29 96.6 33 ...........A................. CCAGCACCAGAGCCTGCGCGTCGAACCCCCAAC 187772 29 100.0 32 ............................. AATGCCGATTGTCCACGCCTGGTTTGCGTCAA 187833 29 100.0 32 ............................. GCGGAATGGTGCGACTCGCAGACGAGTAAAGC 187894 29 96.6 32 .............T............... TCAAAAATCGGTGATTTCATCGACCTGTCAGC 187955 29 93.1 32 ..A..........T............... CTCATACGCGAGAACCCTGACTCGATTATCGA 188016 29 96.6 134 ...........................A. AGAGGGCAATCTAAAAAACAGACGCCGGGTGGGGGTCGAACCCACATATATGCCCTGAGGCACCGATTTTACCGTTAAACGTACCAGCGTCTGCCGTTCAGTATACTAATAACACGTGAGATGCCTGGCAATAT 188179 28 75.9 0 ..........T.-..A..A...C..T..T | ========== ====== ====== ====== ============================= ====================================================================================================================================== ================== 17 29 97.6 38 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCAGCCGGAGAGATTGAACCGCCTCAGCCTGCGCCGGATATGCTGCCGCCAGCGATACCGGAGCCTGAATCACTGGGGGATAGCGGTCATCGGGGGCATGGCTAATGAGTATGGTGGTTGTAGTTACGGAAAATGTACCGCCGCGTCTGCGGGGCCGCCTTGCCGTCTGGTTACTGGAGATTCGAGCTGGTGTGTATGTTGGTGATATCTCAAAACGTGTACGGGAGATGATCTGGCAGCAAATTACACAATTGGCAGGCGTCGGAAACGCTGTGATGGCTTGGGCTACGAATACAGAGTCCGGTTTTGAATTCCAAACTTGGGGTGAAAATCGACGTATTCCGGTAGATTTGGATGGACTGCGATTGGTTTCTTTTCTTCCCGTTGAAAATCAGTAAGTTACACGTTCTTTAATAAAGAGGAATTGTTGGTTATAAGTTGGTAGATTGTTTCTTGCTAAAAATTGTAATATAAAACAGATAGATATGTTTAGT # Right flank : TGACTCAAAACCCTCAATCTAATGACTGTCGTGAATTTGTAAGTTCAATTTTTGAGCCAATTAAAAACGATCCTGGGATGAGATAAGCGTGTCGATAAAGGCTTTTTTATGCGGATATTTCAATACGTCATCGATATACATTATGCCTGTTTGAAATGTTGTAAAAGCCTCGGTGATATCCAGCGCGACTAATCCTCGTCCCTGGGCTTCCTGTTTCAACTGCAGGGGAAGCGCCAGTAAACAGCAGTTTTGCTTCGCAAGCGTAATCGCGGTAGAAACCGAATACACCTCAAATCGAACCCGCTCAGGCGCGATAGTACATAGTAGGGGGTCATCGGTTCCTCCTTCTTCATATTCATGCTTCAGCACAATCCAGTTGTACTCATTTAGTTGCGCGGTACCGATGCGTAGGGCCCCGGTCAGAGGATGTTCCGGCGCGCAAAAAAGCATGAAACGAGTGGAAAATATAGGTAAATAATGAATAGAGGATATCCGCGCTT # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.56, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //