Array 1 12000-10830 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVE010000001.1 Anoxybacillus flavithermus strain WS5490 1_149357_105.128, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 11999 30 100.0 38 .............................. GACAACGTTTGTCGCGACATATATTTGGTAGGAATGAG 11931 30 100.0 36 .............................. GCGTGAGACTGCACAGATTCGTGGCCGTCTTATGAG 11865 30 100.0 38 .............................. TCATTGGTCAATGGCTTTATAATCAAGAGAGGGAGGTG 11797 30 100.0 38 .............................. TCATATGGTCACTTTCAACATGCCGTATGTTTCGCATG 11729 30 100.0 37 .............................. CGTTAATCGTCGGGATAGTGAGTTTGTAATCCTTTTT 11662 30 100.0 36 .............................. AACAAGCTATACAGCGTTTATACGCTGAAACGATCG 11596 30 100.0 36 .............................. CAAAGGCGTTTGACGCATACGAGTACAACGCTTTAA 11530 30 100.0 36 .............................. TCAATTTCTTCTGCTAAGTAAACTCTATTGTCATAG 11464 30 100.0 39 .............................. CTTGCCATTGAGCAATATATGCAACAACAGAAGGCTATT 11395 30 100.0 38 .............................. TCATCTTGCCCCGATGGAGTTACTCCCATGTTAACATG 11327 30 100.0 39 .............................. AAAAATAAAAGTAGTGGTTATTATTATGCTTTTTGCTCG 11258 30 100.0 40 .............................. TCGGGAAATTGAAAAAAGTTATCCTAAATTTTTAGCGCTA 11188 30 100.0 35 .............................. TCAGAAACATTATAGGTATGGTGGTATCGCGGTTT 11123 30 100.0 38 .............................. GTTCAGCGTCAAAATCAACATCCCATTCTTCCCATCAT 11055 30 100.0 36 .............................. TACTGATTTCATATGTTTTATTTCTGATTTTCTCGA 10989 30 100.0 36 .............................. TCCGTTGCCCAACTTTCTGAACCATCACTTTTTACG 10923 30 93.3 34 ..C..........................T AATGGAATCACAATGTTGCCTCCTGCTAGATAAA 10859 30 80.0 0 A.......................A.CGTT | ========== ====== ====== ====== ============================== ======================================== ================== 18 30 98.5 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTGCATCGATCATTTTCTCTCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTCATCGGTTTTGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACTTCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGCTGTATCAACGGACATAGACTATTGACTGAATTTTCAAATGTATGTATAATGATGTTGTATAGCTTTTCCATGTGTTGATATATCAACGCTTTTTTGGG # Right flank : TTTTGTATTGAAAAGCAGGGATGTTTATGCCCTGCTTTTATTTTTTTGTTACAACTTTCAGAAAAGTATTGCGCAAAAACTAGTTCGTTTGTATCATCAGTAATATGAGGATATTTTTTGAAAAGGTGGATAAGGGATGAAACTACTAACATTTCTCGGCGCGAATGACTATCGTGAAACAACGTATCGTTTTCGGGAGCGTGTGCATACAGCAAAGTTTTTTCTATCTGTCCTTATTCAAGAACTGCAACCAGGTGAAATATACGTATTTATGACAGATGGGGCACGAGAGAAAAACGAAGCACCGTTGCTTGACGAATTAAACCGATACGGCGTAGATGAAAAGAAAGTGCATGCTGTATGCATTCCCGATGGGCAAACAGAAGAAGATTTATGGAATATTTTTTCTGTTATTGCTGATCATGTGTATGAACATGATGAAATCGTCCTTGATATTACGCACGGATTTCGGACGTTGCCGCTCGTTGGAACAATTAGTT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 13287-10195 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVE010000030.1 Anoxybacillus flavithermus strain WS5490 30_24143_107.267, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 13286 37 100.0 37 ..................................... TATCGACTTAACACAAGAAAAAACGCTTATTTCTGAT 13212 37 100.0 36 ..................................... TCAATGTAGGCGTTCATCTCTTTTTTGTCATTCCGT 13139 37 100.0 38 ..................................... TCAATGTAGGCGTTCATCTCTTTTTTGTCATTCCATTG 13064 37 100.0 33 ..................................... ATGATGTGGATGATGTAATTTGGATTGAAGATA 12994 37 100.0 37 ..................................... GTGGTAAAGACTTGTGCTAGTTGAGCGCTAAAGCCCG 12920 37 100.0 35 ..................................... TCAACGTCGCCCAAATATTTATCCCACCAATCGCA 12848 37 100.0 38 ..................................... GAGTTACGACTTCAGCCCGGAAAGGGTATTTTAGACCG 12773 37 100.0 39 ..................................... TGTAAGTTCTAAAAGTTCGATAAATTTTTCTTTTAATGT 12697 37 100.0 33 ..................................... AAGAGAAGAATGTATATTCTATACAAAATCTGA 12627 37 100.0 36 ..................................... CGCTACTTCTTCCGTTTGTTGTTCCGTTTCACCTAC 12554 37 100.0 35 ..................................... GTCTAACCATTGATGTAAAACATTATCGAATCTTT 12482 37 100.0 34 ..................................... TGTGTGCCGTCCGAACTATTTTTCGTCAGACAAA 12411 37 100.0 34 ..................................... GGAGCTATGAAAATGTGAAGGAAAAGGTGGAAAA 12340 37 100.0 35 ..................................... GAGCCAGTTAATCCTTCAACACCAACAAGAAGTTA 12268 37 100.0 34 ..................................... AGGTATCACTCATAATGGAAAGCACAACCTTTCA 12197 37 100.0 38 ..................................... TCGTCGCTTGGTAAGGACATTGGTGGGTGGTTTAAAGA 12122 37 100.0 35 ..................................... AACTATATGTCAATAAATTTATATAATCTACTTAA 12050 37 100.0 35 ..................................... AACATTAGAAATGGCGTGGGTTAATCATCTTTAGA 11978 37 100.0 38 ..................................... GAGGAGATTACCATTTCCGATGGGTCTACGAGTGGACA 11903 37 100.0 36 ..................................... ATAAAGGAGTGTATCAAATGAAACGTATTTACTTTA 11830 37 100.0 34 ..................................... AACAAGAAAATCGCCGTTGTGAGCTAATACCTGC 11759 37 100.0 37 ..................................... CAATGAGTGAATCCAAAAAAAAGCATTCTCACGATTG 11685 37 100.0 35 ..................................... CGAGTCGATCGGAATGTCATCACTCAAATATTCAA 11613 37 100.0 35 ..................................... TGTAAAAAGGCACAAAAAATACGCCTTTTCAGCGT 11541 37 100.0 33 ..................................... AAGCGTGCACAATCGAAACCAATTCATTCTATC 11471 37 100.0 34 ..................................... AATTTCCGAGGCAGTAGCTTTGATGCCTCGGGAA 11400 37 100.0 35 ..................................... GTTACTTTCTAAAGATGAATTAATCCACGCCATTT 11328 37 100.0 37 ..................................... CTGCTTATTGTTCAAGGTTAAAATCTTTTTTTAATTG 11254 37 100.0 36 ..................................... TTTTTTGTAGCGCCCATCTGTACCAGTGAGCCACAA 11181 37 100.0 37 ..................................... CCCTTTCGATTTTTATTTTTTTAACCTTTCTGATTAA 11107 37 100.0 35 ..................................... GGTTCACAAAATTCTCACTCCTTTTATTTTTACTC 11035 37 100.0 37 ..................................... ATTTGACCAGCTTGTTGCCTTGCTACATCGTATAGTG 10961 37 100.0 35 ..................................... ATGACGGTACTTCATCTCATTCGTTCGCTTCGTAT 10889 37 100.0 36 ..................................... AATTGATCAACGATAAAATCAGCCTGTCTTTCTTTT 10816 37 100.0 39 ..................................... TCAGAACACGATAACACGCAACAAGCGGAAGAACGAAAA 10740 37 100.0 34 ..................................... TTTTCGTGGGGCGACAAAATACCGAAGCGCATGA 10669 37 100.0 36 ..................................... TGTCCAATAGTAGCGTAGCCGATCAATCGCCCAAGC 10596 37 100.0 36 ..................................... ATATTTTTTTAGATAGCTTTCGACAATAGATTCAAC 10523 37 100.0 36 ..................................... CTGCTTTCGCAAGATCATCAAACACAGAGAAATCAA 10450 37 100.0 36 ..................................... CCATTCGAGAACATTATCTTTAAATTTATGCTTCTT 10377 37 100.0 35 ..................................... ACTTTCCGCCGAACAACATAACCGTATTCTTTCAA 10305 37 100.0 37 ..................................... ACCAGCTACATGGGTGTTACTAGGAATTGTTGCATTA 10231 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 43 37 100.0 36 GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Left flank : TGACATATGATGTTGAGACATTGGAGTCAGATGGTCAAAAACGATTACGAAAAGTAGCAACTATTTGTCAAAATTTTGGACAACGTGTGCAAAAATCTGTTTTCGAGTGTAATGTCAGCCAAGCGCAGTTGGAAGAAATGGAACATCAATTGTTGAAAGTTATTGATCTAGAAAAAGATAGCTTACGAATATATACGTTATATGGTCAACGATCCAAAGCAGTTCGCTCCTATGGAAAGGACCATTACATTGATTATAATGATCCGATTATTTTGTAAGAGTAGAACATATACAATATGTGTAGCAGTTATGAATTTTGGTGCGCGAACATAAAGCAATAGTAAACAATCAGGAGGATCGCGATGAGTAAAAAAGGCTTAGTAAAGCGAAGATCCAAAAATTCATCAGAGACTATCTTTAGCCACAATGCACACCAGACAAAACAGTTCGCGTTTTTATACTTTTACACTTGCTTCACGCATAGGATTGAAGCGTAGGCA # Right flank : TGCAGAAGGAAGTATTGCGTAATAACGTATGTGCTGAAACTGTCGTGCGCATGACGATGTTGATCGTGGAACAATTATCAAATAAGTACATGCAACTGTATAAACATAAACAATATGATCCCATTCGGCAAGGGGATTTGCTTGTACGGGAGTTAGAGGAATATGTGAATATTATAAAATATGGAATTTACAAGTAAAGGCGGGGCTTTTCCCGCCTCATTTATTTGTAAGAAAATTATTGAAATTTTCTGTTTTTATATGATATGATATTCTCAAGGAATTTGAAACTATGTTTCGTAATACGCAACAAAAAAGAAAGGGGAATAATGATGGGGGAATATGTACAAGTTGGACGTTTGCAAGTCGCTAAGTTGTTTTATGAATTTATCGTTGAAGAAGTATTGCCAAATAGCCAAGTAGATAAAGATAAATTTTGGAAAAACTTTGAGCAACTCATTAATGAGTTAACACCAAAAAATAAAGCATTGCTTGAAAAACGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 97621-97051 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVE010000004.1 Anoxybacillus flavithermus strain WS5490 4_99867_85.1605, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 97620 30 100.0 37 .............................. TACTAAAAAGAAAGGTTCCCGTCTTGTCCCAGATCCG 97553 30 100.0 39 .............................. TCAATAAACTACAGATATTCAATTACAATTTAGTCGCAA 97484 30 100.0 40 .............................. CATCAATCTTTGAAATATGTCCGTGTCCCCGCACCGCCAT 97414 30 100.0 35 .............................. GTATTTGATTCGGTAGTGCCCGAACCAATATGATC 97349 30 100.0 37 .............................. AACCAAACGTTTAGCCCTTCTTTCTAATCTCAAACAT 97282 30 100.0 36 .............................. GTAAGCTTTGCCGAGGTGCGCGGGAGCGTTTTTTCC 97216 30 100.0 37 .............................. AAACGAAAGTCATGACAATGTGACGAGGGTAACGAGG 97149 30 100.0 39 .............................. ATGAGGTAAAGAAGGTTTTCGATCAAAAGTTTGCTGTTT 97080 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 9 30 100.0 38 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : ACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGTTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 9895-9396 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVE010000068.1 Anoxybacillus flavithermus strain WS5490 68_9932_99.1142, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 9894 36 100.0 31 .................................... TTAAATTAACAAAGGTTATTGAATTAGGAAT 9827 36 100.0 30 .................................... AATACTTGCGTTGATACATTCAAAACAATT 9761 36 100.0 30 .................................... TGAAGCTGGTGTTGCTGTTGATGTTGTTCG 9695 36 100.0 30 .................................... CGCATAGTCGGAAAGACTATACGCATTTTG 9629 36 100.0 30 .................................... CCATCTTTGTGCATTTCCCATGTCGCGACG 9563 36 100.0 30 .................................... GGCTGATCAATAAGCGCATTATATTCGTAT 9497 36 100.0 30 .................................... TCATAGCCTCATCATATCGCTTCTTGTACT 9431 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 8 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : CCGTTTGATAAAGAAACGCAGGATATATATAACAGCG # Right flank : ACGTGCATCAAAAAGCCTGTAATATGAACGATTACAGGCTTTTTGATCGTTTTAAAAAAAACGTGAGAAGGGGAGAAGAGTTATCCTTCATCCGTTTTTTTAAAAAAGTGACAGTTGCGTTGTTGTAATTGTTTTTTCCTTGGTAGTAGGTTCTCCTAAGAGAAATTGCATTTTTGCATATTGTTTTTCCGTTACGATCATCGCCCGCACTGATCCTTTCGGTGGCAAGTTTCTTTTCAGCCTATTAAGATGTTTATCAGCAGATTCATGCCCATTGCAAATCCGACTATATACGGAAAACTGTAACATATCATATCCTTCGTTCAATAAAAATGTACGAAATTGTCTGTAGTGCCGTTTCTCCCGATTAGTGACGACAGGTAAGTCAAAAAACACAAGTAATCTCATAAACTTACTCATAGGTGTGTATTTGAATAGGAAGAAGTTCCGGCAATTTTAAAAACGAAGGTTTTTCGTTTCGACTAGCTGTTACGAAGCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 1794-2222 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVE010000134.1 Anoxybacillus flavithermus strain WS5490 134_2247_72.8289, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1794 36 100.0 30 .................................... GTATCCGTCGTATTCTTCAACGGAACGAAA 1860 36 100.0 29 .................................... TGAAAATATCCGTCCAGCACCTGCAAAGA 1925 36 100.0 30 .................................... TTGTACATTATTGATACTTACCCATACAAG 1991 36 100.0 29 .................................... TGAAAATATCCGTCCAGCACCTGCAAAGA 2056 36 100.0 30 .................................... TTGTACATTATTGATACTTACCCATACAAG 2122 36 100.0 29 .................................... AGCAACTGCTATCATGAATTGATGAATAG 2187 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : TCTTACGTTTGGGACGATTGATGAAGCGATTCAAATGATCAACGATTACGAAAAGCCGCTTGCGCTTTATTTGTTTTCAGAAGATCGCGATGTGCAACAACAAGTATTACAACAAGTTCGTTTCGGCGGTGGTTGTATAAACGATACGGTTGTACACGTTGCCAATCCTCATTTGCCCTTCGGTGGTGTTGGACAAAGCGGCATCGGTACATACCATGGAAAAGCAAGCTTTGATGCATTTACTCATTACAAAAGCGTGCTCAAACAGACGACGAAATTTGATATCCCGTTGCGTTACCCAAACTTTCCACATGCGCTCAAATGGGTGCGGAAGTTATTGAGATGAAAAAAGGCTGATCCAAAGTACGGATTTGTATTATCCCCTACAGGTAGCCAACAAAAAAGTGGACATTTGTTATGGTGTTCTTAAGAGTCTACCTGGAAGGGGTTTTTATGACCAAATGTAAATTATCAATTTATCCTTGAATAAGACACCTAAG # Right flank : TTGTACATCCATAACAGTTATCCTT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 703-1685 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVE010000008.1 Anoxybacillus flavithermus strain WS5490 8_72814_97.7603, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 703 30 100.0 39 .............................. TTTTTATATTTTTATTAAATTATTTGGATTGGTTGCAGG 772 30 100.0 38 .............................. CCCTTTTTTGCATATTTACACGAATATGAATGTCGTTG 840 30 100.0 39 .............................. TTAGCATATTTTTCTGATTCTTCTGCTCGTGCTACTTTG 909 30 100.0 40 .............................. ATGTTTATAACGCATTTACTTCTTCGTCATCTGTTGATGT 979 30 100.0 37 .............................. TACTCCATTACTCACTCATCCCAAACGGAAGGTCATC 1046 30 100.0 36 .............................. CTCGGCTCGCCCTAGCGGCGAGCGGAAGGGGGGTGT 1112 30 100.0 38 .............................. GTGTAGACTCCGCGTAATATTTACCGGTTTTTCTGTAG 1180 30 100.0 38 .............................. GAATGATTGAAAATACTTCCTGCTCGTTTTCTTGTTGA 1248 30 100.0 35 .............................. CCTTGCCATTCAAATTTTGTTTTATATTTAACACC 1313 30 100.0 39 .............................. TAATCATCTATTCTTAATGTTTTATTTTCATATATTAGC 1382 30 100.0 38 .............................. ATCGCTTGCGTCGACTGGTTTCAAGCCACTTTTAAAAA 1450 30 100.0 38 .............................. CTACACGTTACGCCATGTGTTGGCGATGCAAAAACTAA 1518 30 100.0 38 .............................. TCTGGTCTAAAATTCCCGTTCCTAGCTGAAGTCGTAAC 1586 30 100.0 39 .............................. CTCCGTTTGTAATGCTTTCGGATGCTGTCAAGTATCTAG 1655 30 86.7 0 ......................G...CC.T | T [1680] ========== ====== ====== ====== ============================== ======================================== ================== 15 30 99.1 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AAGATGATTTAAAGCAATTATCCTTTACTTGTCCGCTTGTTTCCGATGAAAAAAATAAAGGACAATCAAGTCGATGAATTTGCTCGCTATTTAATCATTAACTACCATTTTGGAGTTCATATTATTCATCGTGATTATGTAAGAATATGCTATGAAATTCGCTCTAGAGATCGTCTTGTTTGGGTAAATATAGAAAACAAAAATAAGAATTCATGCACATATGTACAAGGTGATTTGAATTTATTTGACGAAGTGTACCATATTTATATTGAATTTGAACGTATCATAAGTAAAGTACTGTAAAATCTACTTATTGTGAATTTATTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGG # Right flank : TTGTGATCAGTTTTATATTTACTTTGTAATGTTTTGTGTTAGGGGTAGTTTCCTTAATTTCCTACTAATCCTTTTTATTTTTTAGAGCGCTGGTCAGCTATCCTCAACCTCTGTTTTTATGTTACTTATTTCAAAGAGTTATATTAATTTAGAAGGAATATATTCCTTTTATGTCGTATTTTATGGTAGGTTAGTTTATTTAGAAACGAGGTGTGATTTTGCTAGCAGAAGCAGTTGTTCGAGTAGGCGAGTCGCTTGTGAGTAGTGATTTACCTTTAACGGAGCGTATTCGTTTGTTAACGGATGTAGATAATGAAGCTTGCAAGAATTTTTTTGAGCACGTCTGGGTTGTGGAATGCATAGAGGAACAAGTGAACGTTCGTTTGATGAGAATAGGAGAAAAGGTGAAGGAAGGTAAAAAAGAAACGTTTGTTGTTGATAGAGCTAAAAACGTTGCCTTTCCTATCATTTATCCTAATGGTGGGAATCCGCTAAATGCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 10674-11651 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVE010000008.1 Anoxybacillus flavithermus strain WS5490 8_72814_97.7603, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 10674 30 100.0 36 .............................. ATAAAATCGCATCATAAGCTCCCGTAGACACATAAA 10740 30 100.0 38 .............................. ATAAAAAATGATGTGGAGGGAGGTGAAGGACATGGAAA 10808 30 100.0 41 .............................. GCATACCTACGTGTTTGATGCCGTATAATTGATTTGGTACA 10879 30 100.0 38 .............................. GCCGAGAAGGTAATAATTAACATGGCGGAGCGTTCTGG 10947 30 100.0 37 .............................. AGAAAAAAATCGCAATGATCGACAAACTTGAAATCAA 11014 30 100.0 35 .............................. ACGAGATAGTAGAATTTTATTCTACTATCTCGCCT 11079 30 100.0 36 .............................. GGGGGATGAGAACATGCACAAGTTGGCGGAGTACAA 11145 30 100.0 39 .............................. TCAAGCGCTCGAAAAAGCATCGTCCAGCCCTAAAAGACG 11214 30 100.0 39 .............................. AAAAGTTCAGACAAAGACTTGAGTATCATTTGGGTTTGA 11283 30 100.0 38 .............................. TTTGTAATTGCTTTTTTAGTTGTCATTTTTCATTCCCC 11351 30 100.0 36 .............................. TTACGTTCGGTAGCTGAACGTGAGGTTGACGCTGAA 11417 30 100.0 38 .............................. CGCGTATAATATTTATTTCGGACAAGGTGACGGCGCGG 11485 30 100.0 39 .............................. CGCATACTCATCGACTGGGTTGGATTCACGTTAAGTCCT 11554 30 100.0 38 .............................. TTTCTCAAACGGATAAGCAAATAAATAAAGTGATTCGT 11622 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 15 30 100.0 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : ACGTTGGATGGAAAGAAAAAAACACAGTTTTTTGATCCGGACGACGAAGTGTTTTCACATTTAATAGAACGGAATTTTTATAACAAATATGAAGCATATTACGGTGTTCCACCAAGCGATCGGCTACTCATCGAACCTGTCGATGTTCGAAAATGCGATCGGGTCGTAACGAGCTTTAAAGGCTTTTACATTACAGCGTGGAAAGGGCGGTATAAGCTCATTTCTTCTCCGGAAAATTTAACGTTTTTGTACCGTGTAGGTATCGGTGGACGAAACTCACAAGGATTCGGCATGTTCCGCATCATAAAAGAAAAGTGAAACATTTCACAGCTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGGG # Right flank : CTCGTATTGGTCACTAGTCAGCGCTTCTACAGTAAAAAGTTTGTATAGTACTTAGTTAGTTTGACGTTGGCGGTATTGTGCTTGTCCCTCTTCACTTTCTATATACATCCAAATTGGCATTTTAACCTCTGATTTACGCAGCACACCCGATGCGGCGTAACACCTCATCTGGGTGCTGTAAGACGTGCTGTTCAAAGCGAGTAATGGATTGGGCAATGTCATTTTGATCCTTGTGAAAAACGTTGGCAATCACTTCATCTTTCAACCATTTCCACAGCCATTCAATCGGATTTAACTGTGGAGAATACGGTGGCAAAAAGATGAAATGAAAAGCATCGCCTTCCTCGCCATCAAGAAAGGCTTGCACCATCTTGGCATGATGAATACGCGCATTGTTCAACACAAGCACGAGGAATCGGTCCGTATATTTCTCTTTCAATCGGTGCAAAAAGTCGAGGAACGTTTCGGCATTGGCGGATGATGCGCGATGAAATACCACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //